RNA–Protein interactions for RNA: ENST00000521562.5

PTK2-233, Transcript of protein tyrosine kinase 2, human

TSL 4

Gene PTK2, Length 678 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-233	ENST00000521562	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	6.12	□□□□□ -1.43
PTK2-233	ENST00000521562		A0A1B0GXF2	115 aa		6.11	□□□□□ -1.43
PTK2-233	ENST00000521562	VCY	O14598	125 aa		6.11	□□□□□ -1.43
PTK2-233	ENST00000521562	ZNF25	P17030	456 aa	Predicted RBP	6.11	□□□□□ -1.43
PTK2-233	ENST00000521562	SUMO2	P61956	95 aa	Known RBP	6.11	□□□□□ -1.43
PTK2-233	ENST00000521562	HIGD2B	Q4VC39	106 aa		6.11	□□□□□ -1.43
PTK2-233	ENST00000521562	MRPL52	Q86TS9	123 aa	Known RBP	6.11	□□□□□ -1.43
PTK2-233	ENST00000521562	OR5A1	Q8NGJ0	315 aa		6.11	□□□□□ -1.43
PTK2-233	ENST00000521562	TMEM101	Q96IK0	257 aa		6.11	□□□□□ -1.43
PTK2-233	ENST00000521562	CDC42SE2	Q9NRR3	84 aa		6.11	□□□□□ -1.43
PTK2-233	ENST00000521562	LINC00959	A0A1B0GUT2	108 aa		6.1	□□□□□ -1.43
PTK2-233	ENST00000521562	C7orf77	A4D0Y5	90 aa		6.1	□□□□□ -1.43
PTK2-233	ENST00000521562	CCL25	O15444	150 aa		6.1	□□□□□ -1.43
PTK2-233	ENST00000521562	PLA2G1B	P04054	148 aa	Known RBP	6.1	□□□□□ -1.43
PTK2-233	ENST00000521562	XCL1	P47992	114 aa		6.1	□□□□□ -1.43
PTK2-233	ENST00000521562	HBB	P68871	147 aa		6.1	□□□□□ -1.43
PTK2-233	ENST00000521562	BTF3L4	Q96K17	158 aa		6.1	□□□□□ -1.43
PTK2-233	ENST00000521562		A0A1B0GW15	77 aa		6.09	□□□□□ -1.43
PTK2-233	ENST00000521562		D6R8Y8	96 aa		6.09	□□□□□ -1.43
PTK2-233	ENST00000521562	PPP1R17	O96001	155 aa		6.09	□□□□□ -1.43
PTK2-233	ENST00000521562	CHTF8	P0CG12	524 aa		6.09	□□□□□ -1.43
PTK2-233	ENST00000521562	FCER1G	P30273	86 aa		6.09	□□□□□ -1.43
PTK2-233	ENST00000521562	CKS2	P33552	79 aa		6.09	□□□□□ -1.43
PTK2-233	ENST00000521562	RNASE13	Q5GAN3	156 aa	Known RBP	6.09	□□□□□ -1.43
PTK2-233	ENST00000521562	ZNF664	Q8N3J9	261 aa		6.09	□□□□□ -1.43
PTK2-233	ENST00000521562	AP5S1	Q9NUS5	200 aa		6.09	□□□□□ -1.43
PTK2-233	ENST00000521562	UBE2D4	Q9Y2X8	147 aa		6.09	□□□□□ -1.43
PTK2-233	ENST00000521562	TRBV24-1	A0A075B6N3	115 aa		6.08	□□□□□ -1.44
PTK2-233	ENST00000521562	IGHV3-64	A0A075B6Q5	118 aa		6.08	□□□□□ -1.44
PTK2-233	ENST00000521562	LINC00862	A6NCI5	91 aa		6.08	□□□□□ -1.44
PTK2-233	ENST00000521562	PPP1R2P9	O14990	202 aa		6.08	□□□□□ -1.44
PTK2-233	ENST00000521562	TNFRSF6B	O95407	300 aa		6.08	□□□□□ -1.44
PTK2-233	ENST00000521562	NPY	P01303	97 aa		6.08	□□□□□ -1.44
PTK2-233	ENST00000521562	RAB14	P61106	215 aa		6.08	□□□□□ -1.44
PTK2-233	ENST00000521562	IFITM2	Q01629	132 aa		6.08	□□□□□ -1.44
PTK2-233	ENST00000521562	CFAP161	Q6P656	301 aa		6.08	□□□□□ -1.44
PTK2-233	ENST00000521562	LINC00526	Q96FQ7	95 aa		6.08	□□□□□ -1.44
PTK2-233	ENST00000521562	KIR2DL4	Q99706	377 aa		6.08	□□□□□ -1.44
PTK2-233	ENST00000521562	C20orf78	Q9BR46	151 aa		6.08	□□□□□ -1.44
PTK2-233	ENST00000521562	GVQW2	A0A096LPI5	108 aa	Predicted RBP	6.07	□□□□□ -1.44
PTK2-233	ENST00000521562		F8W036	122 aa		6.07	□□□□□ -1.44
PTK2-233	ENST00000521562	RPL39	P62891	51 aa	Known RBP	6.07	□□□□□ -1.44
PTK2-233	ENST00000521562	RPL32	P62910	135 aa	Known RBP	6.07	□□□□□ -1.44
PTK2-233	ENST00000521562	CIRBP	Q14011	172 aa	Known RBP	6.07	□□□□□ -1.44
PTK2-233	ENST00000521562	CLLU1	Q5K131	121 aa		6.07	□□□□□ -1.44
PTK2-233	ENST00000521562		Q6ZUT4	128 aa		6.07	□□□□□ -1.44
PTK2-233	ENST00000521562	FAM104A	Q969W3	186 aa		6.07	□□□□□ -1.44
PTK2-233	ENST00000521562	SMIM2	Q9BVW6	85 aa		6.07	□□□□□ -1.44
PTK2-233	ENST00000521562	HMCN2	Q8NDA2	5059 aa		6.06	□□□□□ -1.44
PTK2-233	ENST00000521562	TNXB	P22105	4242 aa		6.06	□□□□□ -1.44
PTK2-233	ENST00000521562	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	6.06	□□□□□ -1.44
PTK2-233	ENST00000521562	TCAP	O15273	167 aa		6.06	□□□□□ -1.44
PTK2-233	ENST00000521562	S100A8	P05109	93 aa		6.06	□□□□□ -1.44
PTK2-233	ENST00000521562	SS18	Q15532	418 aa		6.06	□□□□□ -1.44
PTK2-233	ENST00000521562	ATP5L2	Q7Z4Y8	100 aa		6.06	□□□□□ -1.44
PTK2-233	ENST00000521562	PRSS3P2	Q8NHM4	247 aa		6.06	□□□□□ -1.44
PTK2-233	ENST00000521562	CSDC2	Q9Y534	153 aa	Known RBP	6.06	□□□□□ -1.44
PTK2-233	ENST00000521562	IGHV1-58	A0A0C4DH39	117 aa		6.05	□□□□□ -1.44
PTK2-233	ENST00000521562	ADCYAP1	P18509	176 aa		6.05	□□□□□ -1.44
PTK2-233	ENST00000521562	HNRNPA3	P51991	378 aa	Known RBP	6.05	□□□□□ -1.44
PTK2-233	ENST00000521562	COX6A2	Q02221	97 aa		6.05	□□□□□ -1.44
PTK2-233	ENST00000521562	PNRC1	Q12796	327 aa	Predicted RBP	6.05	□□□□□ -1.44
PTK2-233	ENST00000521562	CD164L2	Q6UWJ8	174 aa		6.05	□□□□□ -1.44
PTK2-233	ENST00000521562	TMEM136	Q6ZRR5	245 aa		6.05	□□□□□ -1.44
PTK2-233	ENST00000521562	SPACA4	Q8TDM5	124 aa		6.05	□□□□□ -1.44
PTK2-233	ENST00000521562	ANAPC16	Q96DE5	110 aa		6.05	□□□□□ -1.44
PTK2-233	ENST00000521562	OPRPN	Q99935	248 aa	Predicted RBP	6.05	□□□□□ -1.44
PTK2-233	ENST00000521562		A0A087WYN8	130 aa		6.04	□□□□□ -1.44
PTK2-233	ENST00000521562	TRAV13-1	A0A0B4J241	112 aa		6.04	□□□□□ -1.44
PTK2-233	ENST00000521562	PHOX2A	O14813	284 aa		6.04	□□□□□ -1.44
PTK2-233	ENST00000521562	PPBP	P02775	128 aa		6.04	□□□□□ -1.44
PTK2-233	ENST00000521562	MT-ND4L	P03901	98 aa		6.04	□□□□□ -1.44
PTK2-233	ENST00000521562	RPL37A	P61513	92 aa	Known RBP	6.04	□□□□□ -1.44
PTK2-233	ENST00000521562	ORMDL3	Q8N138	153 aa		6.04	□□□□□ -1.44
PTK2-233	ENST00000521562	PRELID3A	Q96N28	172 aa		6.04	□□□□□ -1.44
PTK2-233	ENST00000521562	TIMM21	Q9BVV7	248 aa		6.04	□□□□□ -1.44
PTK2-233	ENST00000521562	IGKV2-24	A0A0C4DH68	120 aa		6.03	□□□□□ -1.44
PTK2-233	ENST00000521562	C1orf196	B1AJZ1	125 aa		6.03	□□□□□ -1.44
PTK2-233	ENST00000521562	TMEM18	Q96B42	140 aa		6.03	□□□□□ -1.44
PTK2-233	ENST00000521562	DPH3	Q96FX2	82 aa		6.03	□□□□□ -1.44
PTK2-233	ENST00000521562	PLAC8	Q9NZF1	115 aa		6.03	□□□□□ -1.44
PTK2-233	ENST00000521562	IGLV4-69	A0A075B6H9	119 aa		6.02	□□□□□ -1.45
PTK2-233	ENST00000521562		A0A096LNI7	61 aa		6.02	□□□□□ -1.45
PTK2-233	ENST00000521562	LOC389332	A0A1B0GUA5	103 aa		6.02	□□□□□ -1.45
PTK2-233	ENST00000521562	TMEM218	A2RU14	115 aa		6.02	□□□□□ -1.45
PTK2-233	ENST00000521562	KRTAP29-1	A8MX34	341 aa	Predicted RBP	6.02	□□□□□ -1.45
PTK2-233	ENST00000521562	COX7A2L	O14548	114 aa		6.02	□□□□□ -1.45
PTK2-233	ENST00000521562	SMAGP	Q0VAQ4	97 aa		6.02	□□□□□ -1.45
PTK2-233	ENST00000521562	MAJIN	Q3KP22	176 aa		6.02	□□□□□ -1.45
PTK2-233	ENST00000521562	C5orf38	Q86SI9	138 aa		6.02	□□□□□ -1.45
PTK2-233	ENST00000521562	PRSS47	A8MTI9	375 aa		6.01	□□□□□ -1.45
PTK2-233	ENST00000521562		J3QL48	77 aa		6.01	□□□□□ -1.45
PTK2-233	ENST00000521562	ZNF561-AS1	K7EIQ3	104 aa		6.01	□□□□□ -1.45
PTK2-233	ENST00000521562	MAL	P21145	153 aa		6.01	□□□□□ -1.45
PTK2-233	ENST00000521562	UQCC3	Q6UW78	93 aa		6.01	□□□□□ -1.45
PTK2-233	ENST00000521562	CARD19	Q96LW7	228 aa		6.01	□□□□□ -1.45
PTK2-233	ENST00000521562	SPANXA1	Q9NS26	97 aa		6.01	□□□□□ -1.45
PTK2-233	ENST00000521562	MRPS36	P82909	103 aa	Known RBP	6	□□□□□ -1.45
PTK2-233	ENST00000521562	SYCN	Q0VAF6	134 aa		6	□□□□□ -1.45
PTK2-233	ENST00000521562		Q6ZRU5	148 aa		6	□□□□□ -1.45

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms