RNA–Protein interactions for RNA: ENST00000520828.5

PTK2-223, Transcript of protein tyrosine kinase 2, human

TSL 4

Gene PTK2, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-223	ENST00000520828	SMIM15	Q7Z3B0	74 aa		5.04	□□□□□ -1.6
PTK2-223	ENST00000520828	TSKU	Q8WUA8	353 aa		5.04	□□□□□ -1.6
PTK2-223	ENST00000520828	RPL39L	Q96EH5	51 aa	Known RBP	5.04	□□□□□ -1.6
PTK2-223	ENST00000520828	OSTC	Q9NRP0	149 aa		5.04	□□□□□ -1.6
PTK2-223	ENST00000520828		V9GYV3	84 aa		5.04	□□□□□ -1.6
PTK2-223	ENST00000520828	TRBV25-1	A0A075B6N4	114 aa		5.03	□□□□□ -1.6
PTK2-223	ENST00000520828	IGHV1-24	A0A0C4DH33	117 aa		5.03	□□□□□ -1.6
PTK2-223	ENST00000520828	IQCJ	Q1A5X6	159 aa		5.03	□□□□□ -1.6
PTK2-223	ENST00000520828	MAJIN	Q3KP22	176 aa		5.03	□□□□□ -1.6
PTK2-223	ENST00000520828	FAM74A3	Q4VXF1	159 aa		5.03	□□□□□ -1.6
PTK2-223	ENST00000520828	TMEM97	Q5BJF2	176 aa		5.03	□□□□□ -1.6
PTK2-223	ENST00000520828	KRTAP26-1	Q6PEX3	210 aa		5.03	□□□□□ -1.6
PTK2-223	ENST00000520828	LINC00269	Q8N2A0	174 aa		5.03	□□□□□ -1.6
PTK2-223	ENST00000520828	GATD1	Q8NB37	220 aa		5.03	□□□□□ -1.6
PTK2-223	ENST00000520828	KRTAP4-11	Q9BYQ6	195 aa		5.03	□□□□□ -1.6
PTK2-223	ENST00000520828	PRR34	Q9NV39	138 aa		5.03	□□□□□ -1.6
PTK2-223	ENST00000520828	NAT8	Q9UHE5	227 aa		5.03	□□□□□ -1.6
PTK2-223	ENST00000520828		A0A1B0GUT8	65 aa		5.02	□□□□□ -1.61
PTK2-223	ENST00000520828	RBX1	P62877	108 aa		5.02	□□□□□ -1.61
PTK2-223	ENST00000520828	TMEM243	Q9BU79	118 aa		5.02	□□□□□ -1.61
PTK2-223	ENST00000520828	GFRA4	Q9GZZ7	299 aa		5.02	□□□□□ -1.61
PTK2-223	ENST00000520828	NIT2	Q9NQR4	276 aa		5.02	□□□□□ -1.61
PTK2-223	ENST00000520828	IGLV10-54	A0A075B6I4	117 aa		5.01	□□□□□ -1.61
PTK2-223	ENST00000520828	IGKV2-24	A0A0C4DH68	120 aa		5.01	□□□□□ -1.61
PTK2-223	ENST00000520828	FAM231B	A6NCW3	169 aa		5.01	□□□□□ -1.61
PTK2-223	ENST00000520828	NCR2	O95944	276 aa		5.01	□□□□□ -1.61
PTK2-223	ENST00000520828	SLPI	P03973	132 aa		5.01	□□□□□ -1.61
PTK2-223	ENST00000520828	AMT	P48728	403 aa		5.01	□□□□□ -1.61
PTK2-223	ENST00000520828	COX6A2	Q02221	97 aa		5.01	□□□□□ -1.61
PTK2-223	ENST00000520828	SRSF9	Q13242	221 aa	Known RBP eCLIP	5.01	□□□□□ -1.61	2e-7	■■□□□ 13.7
PTK2-223	ENST00000520828	COTL1	Q14019	142 aa		5.01	□□□□□ -1.61
PTK2-223	ENST00000520828	AMN1	Q8IY45	258 aa		5.01	□□□□□ -1.61
PTK2-223	ENST00000520828	STPG4	Q8N801	248 aa		5.01	□□□□□ -1.61
PTK2-223	ENST00000520828	NUP35	Q8NFH5	326 aa		5.01	□□□□□ -1.61
PTK2-223	ENST00000520828	SMKR1	H3BMG3	65 aa		5	□□□□□ -1.61
PTK2-223	ENST00000520828	RPS10	P46783	165 aa	Known RBP	5	□□□□□ -1.61
PTK2-223	ENST00000520828	IFITM2	Q01629	132 aa		5	□□□□□ -1.61
PTK2-223	ENST00000520828	RIG	Q13278	110 aa		5	□□□□□ -1.61
PTK2-223	ENST00000520828		Q6ZRP5	223 aa		5	□□□□□ -1.61
PTK2-223	ENST00000520828	TMEM191A	Q9H0A3	160 aa		5	□□□□□ -1.61
PTK2-223	ENST00000520828	SMDT1	Q9H4I9	107 aa		5	□□□□□ -1.61
PTK2-223	ENST00000520828	NAT8B	Q9UHF3	227 aa		5	□□□□□ -1.61
PTK2-223	ENST00000520828	IGLV4-60	A0A075B6I1	120 aa		4.99	□□□□□ -1.61
PTK2-223	ENST00000520828	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	4.99	□□□□□ -1.61
PTK2-223	ENST00000520828	TRAV8-4	A0A0B4J246	113 aa		4.99	□□□□□ -1.61
PTK2-223	ENST00000520828	SMIM27	A0A1W2PRY6	76 aa		4.99	□□□□□ -1.61
PTK2-223	ENST00000520828	IGKV2-29	A2NJV5	120 aa	Predicted RBP	4.99	□□□□□ -1.61
PTK2-223	ENST00000520828	SDHAF1	A6NFY7	115 aa		4.99	□□□□□ -1.61
PTK2-223	ENST00000520828	UBE2L6	O14933	153 aa		4.99	□□□□□ -1.61
PTK2-223	ENST00000520828	APCS	P02743	223 aa		4.99	□□□□□ -1.61
PTK2-223	ENST00000520828	CAMP	P49913	170 aa		4.99	□□□□□ -1.61
PTK2-223	ENST00000520828	REG3A	Q06141	175 aa		4.99	□□□□□ -1.61
PTK2-223	ENST00000520828	CLLU1	Q5K131	121 aa		4.99	□□□□□ -1.61
PTK2-223	ENST00000520828	MRPL54	Q6P161	138 aa	Known RBP	4.99	□□□□□ -1.61
PTK2-223	ENST00000520828	C20orf203	Q8NBC4	194 aa		4.99	□□□□□ -1.61
PTK2-223	ENST00000520828	TMEM242	Q9NWH2	141 aa		4.99	□□□□□ -1.61
PTK2-223	ENST00000520828	IGKV3OR2-268	A0A0C4DH90	116 aa		4.98	□□□□□ -1.61
PTK2-223	ENST00000520828	RAB4A	P20338	218 aa		4.98	□□□□□ -1.61
PTK2-223	ENST00000520828	PMCH	P20382	165 aa		4.98	□□□□□ -1.61
PTK2-223	ENST00000520828	ZNF664	Q8N3J9	261 aa		4.98	□□□□□ -1.61
PTK2-223	ENST00000520828	PRSS3P2	Q8NHM4	247 aa		4.98	□□□□□ -1.61
PTK2-223	ENST00000520828	MRAP2	Q96G30	205 aa		4.98	□□□□□ -1.61
PTK2-223	ENST00000520828	ST20	Q9HBF5	79 aa		4.98	□□□□□ -1.61
PTK2-223	ENST00000520828	PSORS1C2	Q9UIG4	136 aa		4.98	□□□□□ -1.61
PTK2-223	ENST00000520828	TRBV6-5	A0A0K0K1A5	114 aa		4.97	□□□□□ -1.61
PTK2-223	ENST00000520828	TSHB	P01222	138 aa		4.97	□□□□□ -1.61
PTK2-223	ENST00000520828	HBB	P68871	147 aa		4.97	□□□□□ -1.61
PTK2-223	ENST00000520828	AMMECR1L	Q6DCA0	310 aa		4.97	□□□□□ -1.61
PTK2-223	ENST00000520828	RNASEK	Q6P5S7	137 aa	Known RBP	4.97	□□□□□ -1.61
PTK2-223	ENST00000520828	CFAP161	Q6P656	301 aa		4.97	□□□□□ -1.61
PTK2-223	ENST00000520828	LINC00474	Q9P2X8	69 aa		4.97	□□□□□ -1.61
PTK2-223	ENST00000520828		A0A1B0GUV1	79 aa		4.96	□□□□□ -1.62
PTK2-223	ENST00000520828		A0A1B0GXF2	115 aa		4.96	□□□□□ -1.62
PTK2-223	ENST00000520828		F8W036	122 aa		4.96	□□□□□ -1.62
PTK2-223	ENST00000520828		I3L3M4	83 aa		4.96	□□□□□ -1.62
PTK2-223	ENST00000520828	FGF6	P10767	208 aa		4.96	□□□□□ -1.62
PTK2-223	ENST00000520828	PRR4	Q16378	134 aa		4.96	□□□□□ -1.62
PTK2-223	ENST00000520828	MRPL51	Q4U2R6	128 aa	Known RBP	4.96	□□□□□ -1.62
PTK2-223	ENST00000520828	FAM104B	Q5XKR9	115 aa		4.96	□□□□□ -1.62
PTK2-223	ENST00000520828	COMMD7	Q86VX2	200 aa		4.96	□□□□□ -1.62
PTK2-223	ENST00000520828	NRAC	Q8N912	160 aa		4.96	□□□□□ -1.62
PTK2-223	ENST00000520828		A0A096LNI7	61 aa		4.95	□□□□□ -1.62
PTK2-223	ENST00000520828		A0A1B0GW15	77 aa		4.95	□□□□□ -1.62
PTK2-223	ENST00000520828		D6R8Y8	96 aa		4.95	□□□□□ -1.62
PTK2-223	ENST00000520828	PPP1R2P9	O14990	202 aa		4.95	□□□□□ -1.62
PTK2-223	ENST00000520828	MT-ND4L	P03901	98 aa		4.95	□□□□□ -1.62
PTK2-223	ENST00000520828	ADCYAP1	P18509	176 aa		4.95	□□□□□ -1.62
PTK2-223	ENST00000520828	SUMO2	P61956	95 aa	Known RBP	4.95	□□□□□ -1.62
PTK2-223	ENST00000520828	C15orf56	Q8N910	161 aa		4.95	□□□□□ -1.62
PTK2-223	ENST00000520828	PKIG	Q9Y2B9	76 aa		4.95	□□□□□ -1.62
PTK2-223	ENST00000520828	TRBV27	A0A0K0K1C4	114 aa		4.94	□□□□□ -1.62
PTK2-223	ENST00000520828	C7orf77	A4D0Y5	90 aa		4.94	□□□□□ -1.62
PTK2-223	ENST00000520828	GAGE12H	A6NDE8	117 aa		4.94	□□□□□ -1.62
PTK2-223	ENST00000520828	NPY	P01303	97 aa		4.94	□□□□□ -1.62
PTK2-223	ENST00000520828	S100A8	P05109	93 aa		4.94	□□□□□ -1.62
PTK2-223	ENST00000520828	FCER1G	P30273	86 aa		4.94	□□□□□ -1.62
PTK2-223	ENST00000520828	CKS2	P33552	79 aa		4.94	□□□□□ -1.62
PTK2-223	ENST00000520828	POLR2K	P53803	58 aa	Known RBP	4.94	□□□□□ -1.62
PTK2-223	ENST00000520828	PNRC1	Q12796	327 aa	Predicted RBP	4.94	□□□□□ -1.62
PTK2-223	ENST00000520828	HIGD2B	Q4VC39	106 aa		4.94	□□□□□ -1.62

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