RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 HERVK_113P61574 105 aa5.96□□□□□ -1.46
VAPB-206ENST00000520497 RPL39P62891 51 aaKnown RBP5.96□□□□□ -1.46
VAPB-206ENST00000520497 AMMECR1LQ6DCA0 310 aa5.96□□□□□ -1.46
VAPB-206ENST00000520497 C11orf45Q8TAV5 145 aa5.96□□□□□ -1.46
VAPB-206ENST00000520497 BAALCQ8WXS3 180 aa5.96□□□□□ -1.46
VAPB-206ENST00000520497 TMEM101Q96IK0 257 aa5.96□□□□□ -1.46
VAPB-206ENST00000520497 VSIG2Q96IQ7 327 aa5.96□□□□□ -1.46
VAPB-206ENST00000520497 TMEM243Q9BU79 118 aa5.96□□□□□ -1.46
VAPB-206ENST00000520497 TIMM21Q9BVV7 248 aa5.96□□□□□ -1.46
VAPB-206ENST00000520497 VCX2Q9H322 139 aa5.96□□□□□ -1.46
VAPB-206ENST00000520497 UQCR10Q9UDW1 63 aa5.96□□□□□ -1.46
VAPB-206ENST00000520497 IGHV3-38A0A0C4DH36 116 aa5.95□□□□□ -1.46
VAPB-206ENST00000520497 IGIPA6NJ69 53 aa5.95□□□□□ -1.46
VAPB-206ENST00000520497 F5H768 121 aa5.95□□□□□ -1.46
VAPB-206ENST00000520497 ATP6V0E2Q8NHE4 81 aa5.95□□□□□ -1.46
VAPB-206ENST00000520497 MIEN1Q9BRT3 115 aa5.95□□□□□ -1.46
VAPB-206ENST00000520497 MRPL35Q9NZE8 188 aaKnown RBP5.95□□□□□ -1.46
VAPB-206ENST00000520497 DNAH7Q8WXX0 4024 aa5.95□□□□□ -1.46
VAPB-206ENST00000520497 CSMD3Q7Z407 3707 aa5.95□□□□□ -1.46
VAPB-206ENST00000520497 TRAV26-1A0A087WT03 109 aa5.94□□□□□ -1.46
VAPB-206ENST00000520497 hDV102S1A0JD36 115 aa5.94□□□□□ -1.46
VAPB-206ENST00000520497 H3BNG1 76 aa5.94□□□□□ -1.46
VAPB-206ENST00000520497 GYPEP15421 78 aa5.94□□□□□ -1.46
VAPB-206ENST00000520497 HTN3P15516 51 aa5.94□□□□□ -1.46
VAPB-206ENST00000520497 ZNF25P17030 456 aaPredicted RBP5.94□□□□□ -1.46
VAPB-206ENST00000520497 CHCHD7Q9BUK0 85 aa5.94□□□□□ -1.46
VAPB-206ENST00000520497 CST9LQ9H4G1 147 aa5.94□□□□□ -1.46
VAPB-206ENST00000520497 IGLV4-3A0A075B6K6 122 aa5.93□□□□□ -1.46
VAPB-206ENST00000520497 A0A0J9YY99 117 aa5.93□□□□□ -1.46
VAPB-206ENST00000520497 PRSS29PA6NIE9 313 aa5.93□□□□□ -1.46
VAPB-206ENST00000520497 HNRNPA3P51991 378 aaKnown RBP5.93□□□□□ -1.46
VAPB-206ENST00000520497 SEC11AP67812 179 aa5.93□□□□□ -1.46
VAPB-206ENST00000520497 MRPS36P82909 103 aaKnown RBP5.93□□□□□ -1.46
VAPB-206ENST00000520497 MRPL23Q16540 153 aaKnown RBP5.93□□□□□ -1.46
VAPB-206ENST00000520497 SLC25A34Q6PIV7 304 aa5.93□□□□□ -1.46
VAPB-206ENST00000520497 MRPL52Q86TS9 123 aaKnown RBP5.93□□□□□ -1.46
VAPB-206ENST00000520497 OR5A1Q8NGJ0 315 aa5.93□□□□□ -1.46
VAPB-206ENST00000520497 DEFB104AQ8WTQ1 72 aa5.93□□□□□ -1.46
VAPB-206ENST00000520497 UBE2D4Q9Y2X8 147 aa5.93□□□□□ -1.46
VAPB-206ENST00000520497 CSDC2Q9Y534 153 aaKnown RBP5.93□□□□□ -1.46
VAPB-206ENST00000520497 ICOSQ9Y6W8 199 aa5.93□□□□□ -1.46
VAPB-206ENST00000520497 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.92□□□□□ -1.46
VAPB-206ENST00000520497 DEFB131BA0A096LNP1 70 aa5.92□□□□□ -1.46
VAPB-206ENST00000520497 TRBV6-8A0A0A6YYG3 113 aa5.92□□□□□ -1.46
VAPB-206ENST00000520497 TRAV10A0A0B4J240 114 aa5.92□□□□□ -1.46
VAPB-206ENST00000520497 IGKV2-29A2NJV5 120 aaPredicted RBP5.92□□□□□ -1.46
VAPB-206ENST00000520497 IGLC3P0DOY3 106 aa5.92□□□□□ -1.46
VAPB-206ENST00000520497 NTM-AS1Q6ZSK4 140 aa5.92□□□□□ -1.46
VAPB-206ENST00000520497 CHCHD5Q9BSY4 110 aa5.92□□□□□ -1.46
VAPB-206ENST00000520497 A0A096LPF7 62 aa5.91□□□□□ -1.46
VAPB-206ENST00000520497 COX8AP10176 69 aa5.91□□□□□ -1.46
VAPB-206ENST00000520497 FGF6P10767 208 aa5.91□□□□□ -1.46
VAPB-206ENST00000520497 NMUP48645 174 aa5.91□□□□□ -1.46
VAPB-206ENST00000520497 MAJINQ3KP22 176 aa5.91□□□□□ -1.46
VAPB-206ENST00000520497 ZC2HC1BQ5TFG8 222 aa5.91□□□□□ -1.46
VAPB-206ENST00000520497 CHAC1Q9BUX1 264 aa5.91□□□□□ -1.46
VAPB-206ENST00000520497 GEMIN7Q9H840 131 aaKnown RBP5.91□□□□□ -1.46
VAPB-206ENST00000520497 C11orf86A6NJI1 115 aa5.9□□□□□ -1.46
VAPB-206ENST00000520497 H3BRM9 83 aa5.9□□□□□ -1.46
VAPB-206ENST00000520497 TMEM170BQ5T4T1 132 aa5.9□□□□□ -1.46
VAPB-206ENST00000520497 NFE4Q86UQ8 179 aa5.9□□□□□ -1.46
VAPB-206ENST00000520497 C14orf144Q96I85 54 aa5.9□□□□□ -1.46
VAPB-206ENST00000520497 AMELXQ99217 191 aa5.9□□□□□ -1.46
VAPB-206ENST00000520497 TINCRA0A1B0GVN0 87 aa5.89□□□□□ -1.47
VAPB-206ENST00000520497 DLEU1O43261 78 aa5.89□□□□□ -1.47
VAPB-206ENST00000520497 TIRAPP58753 221 aa5.89□□□□□ -1.47
VAPB-206ENST00000520497 Q6ZUT4 128 aa5.89□□□□□ -1.47
VAPB-206ENST00000520497 STPG4Q8N801 248 aa5.89□□□□□ -1.47
VAPB-206ENST00000520497 WWC2-AS2Q96NR7 200 aa5.89□□□□□ -1.47
VAPB-206ENST00000520497 MRPS16Q9Y3D3 137 aaKnown RBP5.89□□□□□ -1.47
VAPB-206ENST00000520497 DYNC2H1Q8NCM8 4307 aaKnown RBP5.88□□□□□ -1.47
VAPB-206ENST00000520497 IGLV4-69A0A075B6H9 119 aa5.88□□□□□ -1.47
VAPB-206ENST00000520497 LINC00587B1AMM8 73 aa5.88□□□□□ -1.47
VAPB-206ENST00000520497 E9PLD3 99 aa5.88□□□□□ -1.47
VAPB-206ENST00000520497 SIVA1O15304 175 aa5.88□□□□□ -1.47
VAPB-206ENST00000520497 HERVK_113P63121 156 aa5.88□□□□□ -1.47
VAPB-206ENST00000520497 GAGE6Q13070 117 aa5.88□□□□□ -1.47
VAPB-206ENST00000520497 ANKRD39Q53RE8 183 aa5.88□□□□□ -1.47
VAPB-206ENST00000520497 C15orf53Q8NAA6 179 aa5.88□□□□□ -1.47
VAPB-206ENST00000520497 FAM104AQ969W3 186 aa5.88□□□□□ -1.47
VAPB-206ENST00000520497 OPRPNQ99935 248 aaPredicted RBP5.88□□□□□ -1.47
VAPB-206ENST00000520497 RYR2Q92736 4967 aa5.88□□□□□ -1.47
VAPB-206ENST00000520497 TRAV8-6A0A0B4J262 113 aa5.87□□□□□ -1.47
VAPB-206ENST00000520497 A6NJY4 79 aa5.87□□□□□ -1.47
VAPB-206ENST00000520497 TMEM262E9PQX1 116 aa5.87□□□□□ -1.47
VAPB-206ENST00000520497 M0R143 59 aa5.87□□□□□ -1.47
VAPB-206ENST00000520497 CCL25O15444 150 aa5.87□□□□□ -1.47
VAPB-206ENST00000520497 LGALS3P17931 250 aaKnown RBP5.87□□□□□ -1.47
VAPB-206ENST00000520497 LBHQ53QV2 105 aaPredicted RBP5.87□□□□□ -1.47
VAPB-206ENST00000520497 CEMP1Q6PRD7 247 aaPredicted RBP5.87□□□□□ -1.47
VAPB-206ENST00000520497 BOD1L2Q8IYS8 172 aa5.87□□□□□ -1.47
VAPB-206ENST00000520497 PLEKHB2Q96CS7 222 aa5.87□□□□□ -1.47
VAPB-206ENST00000520497 TENM2Q9NT68 2774 aa5.87□□□□□ -1.47
VAPB-206ENST00000520497 A0A0J9YXV3 536 aa5.86□□□□□ -1.47
VAPB-206ENST00000520497 A0A1B0GUV1 79 aa5.86□□□□□ -1.47
VAPB-206ENST00000520497 UBE2D1P51668 147 aa5.86□□□□□ -1.47
VAPB-206ENST00000520497 TNP2Q05952 138 aa5.86□□□□□ -1.47
VAPB-206ENST00000520497 LELP1Q5T871 98 aa5.86□□□□□ -1.47
VAPB-206ENST00000520497 LYPD5Q6UWN5 251 aa5.86□□□□□ -1.47
VAPB-206ENST00000520497 LINC00469Q8N7U9 141 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms