RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 OSTCQ9NRP0 149 aa6.84□□□□□ -1.31
PDGFRB-203ENST00000517660 TRBV24-1A0A075B6N3 115 aa6.83□□□□□ -1.32
PDGFRB-203ENST00000517660 FAM231BA6NCW3 169 aa6.83□□□□□ -1.32
PDGFRB-203ENST00000517660 C9orf163Q8N9P6 203 aa6.83□□□□□ -1.32
PDGFRB-203ENST00000517660 BTF3L4Q96K17 158 aa6.83□□□□□ -1.32
PDGFRB-203ENST00000517660 TRBV6-5A0A0K0K1A5 114 aa6.82□□□□□ -1.32
PDGFRB-203ENST00000517660 A0A1B0GUT8 65 aa6.82□□□□□ -1.32
PDGFRB-203ENST00000517660 SDHAF1A6NFY7 115 aa6.82□□□□□ -1.32
PDGFRB-203ENST00000517660 H7C423 109 aa6.82□□□□□ -1.32
PDGFRB-203ENST00000517660 PMCHP20382 165 aa6.82□□□□□ -1.32
PDGFRB-203ENST00000517660 KRTAP10-4P60372 401 aaPredicted RBP6.82□□□□□ -1.32
PDGFRB-203ENST00000517660 AMMECR1LQ6DCA0 310 aa6.82□□□□□ -1.32
PDGFRB-203ENST00000517660 hDV102S1A0JD36 115 aa6.81□□□□□ -1.32
PDGFRB-203ENST00000517660 HIGD1CA8MV81 97 aa6.81□□□□□ -1.32
PDGFRB-203ENST00000517660 I3L3M4 83 aa6.81□□□□□ -1.32
PDGFRB-203ENST00000517660 APCSP02743 223 aa6.81□□□□□ -1.32
PDGFRB-203ENST00000517660 CNBPP62633 177 aaKnown RBP6.81□□□□□ -1.32
PDGFRB-203ENST00000517660 SDIM1Q6ZPB5 146 aa6.81□□□□□ -1.32
PDGFRB-203ENST00000517660 IMMP2LQ96T52 175 aa6.81□□□□□ -1.32
PDGFRB-203ENST00000517660 TMEM191AQ9H0A3 160 aa6.81□□□□□ -1.32
PDGFRB-203ENST00000517660 AP5S1Q9NUS5 200 aa6.81□□□□□ -1.32
PDGFRB-203ENST00000517660 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.8□□□□□ -1.32
PDGFRB-203ENST00000517660 IGKV2-29A2NJV5 120 aaPredicted RBP6.8□□□□□ -1.32
PDGFRB-203ENST00000517660 GAGE12HA6NDE8 117 aa6.8□□□□□ -1.32
PDGFRB-203ENST00000517660 TRGC2P03986 189 aa6.8□□□□□ -1.32
PDGFRB-203ENST00000517660 FGF6P10767 208 aa6.8□□□□□ -1.32
PDGFRB-203ENST00000517660 AKR1D1P51857 326 aa6.8□□□□□ -1.32
PDGFRB-203ENST00000517660 RNASEKQ6P5S7 137 aaKnown RBP6.8□□□□□ -1.32
PDGFRB-203ENST00000517660 CFAP161Q6P656 301 aa6.8□□□□□ -1.32
PDGFRB-203ENST00000517660 RNF185Q96GF1 192 aa6.8□□□□□ -1.32
PDGFRB-203ENST00000517660 ST20Q9HBF5 79 aa6.8□□□□□ -1.32
PDGFRB-203ENST00000517660 IGKV3OR2-268A0A0C4DH90 116 aa6.79□□□□□ -1.32
PDGFRB-203ENST00000517660 GAS8-AS1O95177 125 aa6.79□□□□□ -1.32
PDGFRB-203ENST00000517660 OXTP01178 125 aa6.79□□□□□ -1.32
PDGFRB-203ENST00000517660 RAB4AP20338 218 aa6.79□□□□□ -1.32
PDGFRB-203ENST00000517660 SNRPEP62304 92 aaKnown RBP6.79□□□□□ -1.32
PDGFRB-203ENST00000517660 RIGQ13278 110 aa6.79□□□□□ -1.32
PDGFRB-203ENST00000517660 MRAP2Q96G30 205 aa6.79□□□□□ -1.32
PDGFRB-203ENST00000517660 V9GYV3 84 aa6.79□□□□□ -1.32
PDGFRB-203ENST00000517660 IGHV3-64A0A075B6Q5 118 aa6.78□□□□□ -1.32
PDGFRB-203ENST00000517660 TRAV9-1A0A075B6T8 112 aa6.78□□□□□ -1.32
PDGFRB-203ENST00000517660 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.78□□□□□ -1.32
PDGFRB-203ENST00000517660 C5orf52A6NGY3 159 aa6.78□□□□□ -1.32
PDGFRB-203ENST00000517660 TSHBP01222 138 aa6.78□□□□□ -1.32
PDGFRB-203ENST00000517660 ESDP10768 282 aa6.78□□□□□ -1.32
PDGFRB-203ENST00000517660 ZNF25P17030 456 aaPredicted RBP6.78□□□□□ -1.32
PDGFRB-203ENST00000517660 POLR2KP53803 58 aaKnown RBP6.78□□□□□ -1.32
PDGFRB-203ENST00000517660 NUP35Q8NFH5 326 aa6.78□□□□□ -1.32
PDGFRB-203ENST00000517660 CHCHD10Q8WYQ3 142 aaPredicted RBP6.78□□□□□ -1.32
PDGFRB-203ENST00000517660 TMEM101Q96IK0 257 aa6.78□□□□□ -1.32
PDGFRB-203ENST00000517660 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.78□□□□□ -1.32
PDGFRB-203ENST00000517660 TRBV27A0A0K0K1C4 114 aa6.77□□□□□ -1.33
PDGFRB-203ENST00000517660 PPP1R17O96001 155 aa6.77□□□□□ -1.33
PDGFRB-203ENST00000517660 SLPIP03973 132 aa6.77□□□□□ -1.33
PDGFRB-203ENST00000517660 NDUFA6P56556 154 aa6.77□□□□□ -1.33
PDGFRB-203ENST00000517660 FABP9Q0Z7S8 132 aa6.77□□□□□ -1.33
PDGFRB-203ENST00000517660 AMN1Q8IY45 258 aa6.77□□□□□ -1.33
PDGFRB-203ENST00000517660 OR5A1Q8NGJ0 315 aa6.77□□□□□ -1.33
PDGFRB-203ENST00000517660 NAT8BQ9UHF3 227 aa6.77□□□□□ -1.33
PDGFRB-203ENST00000517660 FAT4Q6V0I7 4981 aa6.76□□□□□ -1.33
PDGFRB-203ENST00000517660 PANO1I0J062 215 aa6.76□□□□□ -1.33
PDGFRB-203ENST00000517660 VCYO14598 125 aa6.76□□□□□ -1.33
PDGFRB-203ENST00000517660 HIST1H2BKO60814 126 aa6.76□□□□□ -1.33
PDGFRB-203ENST00000517660 HIST1H2BJP06899 126 aa6.76□□□□□ -1.33
PDGFRB-203ENST00000517660 HIST1H2BOP23527 126 aa6.76□□□□□ -1.33
PDGFRB-203ENST00000517660 HIST1H2BBP33778 126 aa6.76□□□□□ -1.33
PDGFRB-203ENST00000517660 HIST1H2BDP58876 126 aa6.76□□□□□ -1.33
PDGFRB-203ENST00000517660 HIST1H2BCP62807 126 aa6.76□□□□□ -1.33
PDGFRB-203ENST00000517660 HIST2H2BEQ16778 126 aa6.76□□□□□ -1.33
PDGFRB-203ENST00000517660 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.76□□□□□ -1.33
PDGFRB-203ENST00000517660 C15orf56Q8N910 161 aa6.76□□□□□ -1.33
PDGFRB-203ENST00000517660 HIST1H2BHQ93079 126 aa6.76□□□□□ -1.33
PDGFRB-203ENST00000517660 DPH3Q96FX2 82 aa6.76□□□□□ -1.33
PDGFRB-203ENST00000517660 HIST1H2BNQ99877 126 aa6.76□□□□□ -1.33
PDGFRB-203ENST00000517660 HIST1H2BMQ99879 126 aa6.76□□□□□ -1.33
PDGFRB-203ENST00000517660 SMIM27A0A1W2PRY6 76 aa6.75□□□□□ -1.33
PDGFRB-203ENST00000517660 SMKR1H3BMG3 65 aa6.75□□□□□ -1.33
PDGFRB-203ENST00000517660 S100A8P05109 93 aa6.75□□□□□ -1.33
PDGFRB-203ENST00000517660 RPL37AP61513 92 aaKnown RBP6.75□□□□□ -1.33
PDGFRB-203ENST00000517660 CIRBPQ14011 172 aaKnown RBP6.75□□□□□ -1.33
PDGFRB-203ENST00000517660 MRPL52Q86TS9 123 aaKnown RBP6.75□□□□□ -1.33
PDGFRB-203ENST00000517660 TRAPPC1Q9Y5R8 145 aa6.75□□□□□ -1.33
PDGFRB-203ENST00000517660 LINC00959A0A1B0GUT2 108 aa6.74□□□□□ -1.33
PDGFRB-203ENST00000517660 A0A1B0GW15 77 aa6.74□□□□□ -1.33
PDGFRB-203ENST00000517660 MT1HL1P0DM35 61 aa6.74□□□□□ -1.33
PDGFRB-203ENST00000517660 FCER1GP30273 86 aa6.74□□□□□ -1.33
PDGFRB-203ENST00000517660 FOXI1Q12951 378 aa6.74□□□□□ -1.33
PDGFRB-203ENST00000517660 HIGD2BQ4VC39 106 aa6.74□□□□□ -1.33
PDGFRB-203ENST00000517660 FAM104BQ5XKR9 115 aa6.74□□□□□ -1.33
PDGFRB-203ENST00000517660 NRACQ8N912 160 aa6.74□□□□□ -1.33
PDGFRB-203ENST00000517660 CDC42SE2Q9NRR3 84 aa6.74□□□□□ -1.33
PDGFRB-203ENST00000517660 GVQW2A0A096LPI5 108 aaPredicted RBP6.73□□□□□ -1.33
PDGFRB-203ENST00000517660 PHOX2AO14813 284 aa6.73□□□□□ -1.33
PDGFRB-203ENST00000517660 CCL25O15444 150 aa6.73□□□□□ -1.33
PDGFRB-203ENST00000517660 S100A2P29034 98 aa6.73□□□□□ -1.33
PDGFRB-203ENST00000517660 XCL1P47992 114 aa6.73□□□□□ -1.33
PDGFRB-203ENST00000517660 CAMPP49913 170 aa6.73□□□□□ -1.33
PDGFRB-203ENST00000517660 SUMO2P61956 95 aaKnown RBP6.73□□□□□ -1.33
PDGFRB-203ENST00000517660 SMAGPQ0VAQ4 97 aa6.73□□□□□ -1.33
PDGFRB-203ENST00000517660 SS18Q15532 418 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms