RNA–Protein interactions for RNA: ENST00000517488.1

PDGFRB-202, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-202ENST00000517488 C9orf163Q8N9P6 203 aa9.1□□□□□ -0.95
PDGFRB-202ENST00000517488 TMEM101Q96IK0 257 aa9.1□□□□□ -0.95
PDGFRB-202ENST00000517488 SRRM2Q9UQ35 2752 aaKnown RBP9.1□□□□□ -0.95
PDGFRB-202ENST00000517488 TRBV24-1A0A075B6N3 115 aa9.09□□□□□ -0.95
PDGFRB-202ENST00000517488 D6R8Y8 96 aa9.09□□□□□ -0.95
PDGFRB-202ENST00000517488 F8W036 122 aa9.09□□□□□ -0.95
PDGFRB-202ENST00000517488 CNBPP62633 177 aaKnown RBP9.09□□□□□ -0.95
PDGFRB-202ENST00000517488 PNRC1Q12796 327 aaPredicted RBP9.09□□□□□ -0.95
PDGFRB-202ENST00000517488 C15orf56Q8N910 161 aa9.09□□□□□ -0.95
PDGFRB-202ENST00000517488 KIR2DL4Q99706 377 aa9.09□□□□□ -0.95
PDGFRB-202ENST00000517488 C20orf78Q9BR46 151 aa9.09□□□□□ -0.95
PDGFRB-202ENST00000517488 CDC42SE2Q9NRR3 84 aa9.09□□□□□ -0.95
PDGFRB-202ENST00000517488 HERC1Q15751 4861 aa9.08□□□□□ -0.96
PDGFRB-202ENST00000517488 LINC00959A0A1B0GUT2 108 aa9.08□□□□□ -0.96
PDGFRB-202ENST00000517488 TNFRSF6BO95407 300 aa9.08□□□□□ -0.96
PDGFRB-202ENST00000517488 FOXI1Q12951 378 aa9.08□□□□□ -0.96
PDGFRB-202ENST00000517488 LINC00528Q8N1L1 170 aa9.08□□□□□ -0.96
PDGFRB-202ENST00000517488 CIRBP-AS1Q8TBR5 109 aa9.08□□□□□ -0.96
PDGFRB-202ENST00000517488 NPYP01303 97 aa9.07□□□□□ -0.96
PDGFRB-202ENST00000517488 MT-ND4LP03901 98 aa9.07□□□□□ -0.96
PDGFRB-202ENST00000517488 XCL1P47992 114 aa9.07□□□□□ -0.96
PDGFRB-202ENST00000517488 RPL32P62910 135 aaKnown RBP9.07□□□□□ -0.96
PDGFRB-202ENST00000517488 SDIM1Q6ZPB5 146 aa9.07□□□□□ -0.96
PDGFRB-202ENST00000517488 ATP5L2Q7Z4Y8 100 aa9.07□□□□□ -0.96
PDGFRB-202ENST00000517488 ZNF664Q8N3J9 261 aa9.07□□□□□ -0.96
PDGFRB-202ENST00000517488 ANAPC16Q96DE5 110 aa9.07□□□□□ -0.96
PDGFRB-202ENST00000517488 FLG2Q5D862 2391 aaPredicted RBP9.07□□□□□ -0.96
PDGFRB-202ENST00000517488 CCL25O15444 150 aa9.06□□□□□ -0.96
PDGFRB-202ENST00000517488 HIGD2BQ4VC39 106 aa9.06□□□□□ -0.96
PDGFRB-202ENST00000517488 CFAP161Q6P656 301 aa9.06□□□□□ -0.96
PDGFRB-202ENST00000517488 AP5S1Q9NUS5 200 aa9.06□□□□□ -0.96
PDGFRB-202ENST00000517488 UBE2D4Q9Y2X8 147 aa9.06□□□□□ -0.96
PDGFRB-202ENST00000517488 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.06□□□□□ -0.96
PDGFRB-202ENST00000517488 PANO1I0J062 215 aa9.05□□□□□ -0.96
PDGFRB-202ENST00000517488 ADCYAP1P18509 176 aa9.05□□□□□ -0.96
PDGFRB-202ENST00000517488 SMIM2Q9BVW6 85 aa9.05□□□□□ -0.96
PDGFRB-202ENST00000517488 PPBPP02775 128 aa9.04□□□□□ -0.96
PDGFRB-202ENST00000517488 RNASE13Q5GAN3 156 aaKnown RBP9.04□□□□□ -0.96
PDGFRB-202ENST00000517488 TMEM136Q6ZRR5 245 aa9.04□□□□□ -0.96
PDGFRB-202ENST00000517488 ORMDL3Q8N138 153 aa9.04□□□□□ -0.96
PDGFRB-202ENST00000517488 CSDC2Q9Y534 153 aaKnown RBP9.04□□□□□ -0.96
PDGFRB-202ENST00000517488 PKHD1L1Q86WI1 4243 aa9.04□□□□□ -0.96
PDGFRB-202ENST00000517488 GVQW2A0A096LPI5 108 aaPredicted RBP9.03□□□□□ -0.96
PDGFRB-202ENST00000517488 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.03□□□□□ -0.96
PDGFRB-202ENST00000517488 TMEM218A2RU14 115 aa9.03□□□□□ -0.96
PDGFRB-202ENST00000517488 PHOX2AO14813 284 aa9.03□□□□□ -0.96
PDGFRB-202ENST00000517488 TCAPO15273 167 aa9.03□□□□□ -0.96
PDGFRB-202ENST00000517488 RPL39P62891 51 aaKnown RBP9.03□□□□□ -0.96
PDGFRB-202ENST00000517488 SS18Q15532 418 aa9.03□□□□□ -0.96
PDGFRB-202ENST00000517488 UQCC3Q6UW78 93 aa9.03□□□□□ -0.96
PDGFRB-202ENST00000517488 Q6ZUT4 128 aa9.03□□□□□ -0.96
PDGFRB-202ENST00000517488 IGHV3-64A0A075B6Q5 118 aa9.02□□□□□ -0.97
PDGFRB-202ENST00000517488 PLA2G1BP04054 148 aaKnown RBP9.02□□□□□ -0.97
PDGFRB-202ENST00000517488 SMAGPQ0VAQ4 97 aa9.02□□□□□ -0.97
PDGFRB-202ENST00000517488 CD164L2Q6UWJ8 174 aa9.02□□□□□ -0.97
PDGFRB-202ENST00000517488 PRELID3AQ96N28 172 aa9.02□□□□□ -0.97
PDGFRB-202ENST00000517488 TIMM21Q9BVV7 248 aa9.02□□□□□ -0.97
PDGFRB-202ENST00000517488 TRAV13-1A0A0B4J241 112 aa9.01□□□□□ -0.97
PDGFRB-202ENST00000517488 CHTF8P0CG12 524 aa9.01□□□□□ -0.97
PDGFRB-202ENST00000517488 FAM104AQ969W3 186 aa9.01□□□□□ -0.97
PDGFRB-202ENST00000517488 TMEM18Q96B42 140 aa9.01□□□□□ -0.97
PDGFRB-202ENST00000517488 FAT3Q8TDW7 4589 aa9□□□□□ -0.97
PDGFRB-202ENST00000517488 IGHV1-58A0A0C4DH39 117 aa9□□□□□ -0.97
PDGFRB-202ENST00000517488 C1orf196B1AJZ1 125 aa9□□□□□ -0.97
PDGFRB-202ENST00000517488 KRTAP10-4P60372 401 aaPredicted RBP9□□□□□ -0.97
PDGFRB-202ENST00000517488 LINC00526Q96FQ7 95 aa9□□□□□ -0.97
PDGFRB-202ENST00000517488 OPRPNQ99935 248 aaPredicted RBP9□□□□□ -0.97
PDGFRB-202ENST00000517488 LOC389332A0A1B0GUA5 103 aa8.99□□□□□ -0.97
PDGFRB-202ENST00000517488 CIRBPQ14011 172 aaKnown RBP8.99□□□□□ -0.97
PDGFRB-202ENST00000517488 COMMD7Q86VX2 200 aa8.99□□□□□ -0.97
PDGFRB-202ENST00000517488 IMMP2LQ96T52 175 aa8.99□□□□□ -0.97
PDGFRB-202ENST00000517488 RAB5AP20339 215 aa8.98□□□□□ -0.97
PDGFRB-202ENST00000517488 COX6A2Q02221 97 aa8.98□□□□□ -0.97
PDGFRB-202ENST00000517488 PRSS3P2Q8NHM4 247 aa8.98□□□□□ -0.97
PDGFRB-202ENST00000517488 SPANXA1Q9NS26 97 aa8.98□□□□□ -0.97
PDGFRB-202ENST00000517488 LAMTOR2Q9Y2Q5 125 aa8.98□□□□□ -0.97
PDGFRB-202ENST00000517488 LRP1Q07954 4544 aaKnown RBP8.98□□□□□ -0.97
PDGFRB-202ENST00000517488 PRSS47A8MTI9 375 aa8.97□□□□□ -0.97
PDGFRB-202ENST00000517488 COX7A2LO14548 114 aa8.97□□□□□ -0.97
PDGFRB-202ENST00000517488 SPACA4Q8TDM5 124 aa8.97□□□□□ -0.97
PDGFRB-202ENST00000517488 SEC11CQ9BY50 192 aa8.97□□□□□ -0.97
PDGFRB-202ENST00000517488 CTDSP1Q9GZU7 261 aa8.97□□□□□ -0.97
PDGFRB-202ENST00000517488 MAP1LC3AQ9H492 121 aa8.97□□□□□ -0.97
PDGFRB-202ENST00000517488 MRPS36P82909 103 aaKnown RBP8.96□□□□□ -0.98
PDGFRB-202ENST00000517488 C5orf38Q86SI9 138 aa8.96□□□□□ -0.98
PDGFRB-202ENST00000517488 DPH3Q96FX2 82 aa8.96□□□□□ -0.98
PDGFRB-202ENST00000517488 DMBT1Q9UGM3 2413 aaPredicted RBP8.96□□□□□ -0.98
PDGFRB-202ENST00000517488 A0A087WYN8 130 aa8.95□□□□□ -0.98
PDGFRB-202ENST00000517488 MALP21145 153 aa8.95□□□□□ -0.98
PDGFRB-202ENST00000517488 Q8N8P6 123 aa8.95□□□□□ -0.98
PDGFRB-202ENST00000517488 IGKV2-24A0A0C4DH68 120 aa8.94□□□□□ -0.98
PDGFRB-202ENST00000517488 ZNF561-AS1K7EIQ3 104 aa8.94□□□□□ -0.98
PDGFRB-202ENST00000517488 RPL37AP61513 92 aaKnown RBP8.94□□□□□ -0.98
PDGFRB-202ENST00000517488 KIAA1644Q3SXP7 199 aa8.94□□□□□ -0.98
PDGFRB-202ENST00000517488 CARD19Q96LW7 228 aa8.94□□□□□ -0.98
PDGFRB-202ENST00000517488 IGLV4-69A0A075B6H9 119 aa8.93□□□□□ -0.98
PDGFRB-202ENST00000517488 IGLV4-3A0A075B6K6 122 aa8.93□□□□□ -0.98
PDGFRB-202ENST00000517488 IFITM10A6NMD0 228 aa8.93□□□□□ -0.98
PDGFRB-202ENST00000517488 IFI27P40305 119 aaPredicted RBP8.93□□□□□ -0.98
PDGFRB-202ENST00000517488 SYCNQ0VAF6 134 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms