RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 TSC22D3Q99576 134 aa-0.21□□□□□ -2.44
NEDD4-211ENST00000514893 NDUFA4L2Q9NRX3 87 aa-0.21□□□□□ -2.44
NEDD4-211ENST00000514893 SERP1Q9Y6X1 66 aa-0.21□□□□□ -2.44
NEDD4-211ENST00000514893 DSTQ03001 7570 aaKnown RBP-0.21□□□□□ -2.44
NEDD4-211ENST00000514893 BICRAQ9NZM4 1560 aa-0.21□□□□□ -2.44
NEDD4-211ENST00000514893 LAMC1P11047 1609 aa-0.21□□□□□ -2.44
NEDD4-211ENST00000514893 MAP1AP78559 2803 aaPredicted RBP-0.21□□□□□ -2.44
NEDD4-211ENST00000514893 BCL9LQ86UU0 1499 aa-0.22□□□□□ -2.44
NEDD4-211ENST00000514893 WDR7Q9Y4E6 1490 aa-0.22□□□□□ -2.44
NEDD4-211ENST00000514893 SBF2Q86WG5 1849 aa-0.22□□□□□ -2.44
NEDD4-211ENST00000514893 ARHGEF12Q9NZN5 1544 aa-0.22□□□□□ -2.44
NEDD4-211ENST00000514893 PAPPAQ13219 1627 aa-0.22□□□□□ -2.44
NEDD4-211ENST00000514893 SPAARA0A1B0GVQ0 90 aa-0.22□□□□□ -2.44
NEDD4-211ENST00000514893 UQCR11O14957 56 aa-0.22□□□□□ -2.44
NEDD4-211ENST00000514893 Q6AWC8 147 aa-0.22□□□□□ -2.44
NEDD4-211ENST00000514893 FDCSPQ8NFU4 85 aa-0.22□□□□□ -2.44
NEDD4-211ENST00000514893 DYNLRB1Q9NP97 96 aa-0.22□□□□□ -2.44
NEDD4-211ENST00000514893 TENM2Q9NT68 2774 aa-0.22□□□□□ -2.44
NEDD4-211ENST00000514893 KDM5AP29375 1690 aaKnown RBP-0.22□□□□□ -2.44
NEDD4-211ENST00000514893 PLCE1Q9P212 2302 aa-0.22□□□□□ -2.45
NEDD4-211ENST00000514893 ATRQ13535 2644 aa-0.23□□□□□ -2.45
NEDD4-211ENST00000514893 IGLC7A0M8Q6 106 aa-0.23□□□□□ -2.45
NEDD4-211ENST00000514893 I3L2K1 104 aa-0.23□□□□□ -2.45
NEDD4-211ENST00000514893 TPPP2P59282 170 aa-0.23□□□□□ -2.45
NEDD4-211ENST00000514893 CATR1Q13166 79 aa-0.23□□□□□ -2.45
NEDD4-211ENST00000514893 CCDC58Q4VC31 144 aa-0.23□□□□□ -2.45
NEDD4-211ENST00000514893 MGST2Q99735 147 aa-0.23□□□□□ -2.45
NEDD4-211ENST00000514893 RERGLQ9H628 205 aa-0.23□□□□□ -2.45
NEDD4-211ENST00000514893 NAA60Q9H7X0 242 aa-0.23□□□□□ -2.45
NEDD4-211ENST00000514893 FAIMQ9NVQ4 179 aa-0.23□□□□□ -2.45
NEDD4-211ENST00000514893 ANKRD17O75179 2603 aaKnown RBP-0.23□□□□□ -2.45
NEDD4-211ENST00000514893 SETXQ7Z333 2677 aaKnown RBP-0.23□□□□□ -2.45
NEDD4-211ENST00000514893 TNXBP22105 4242 aa-0.24□□□□□ -2.45
NEDD4-211ENST00000514893 TRBV7-3A0A075B6L6 115 aa-0.24□□□□□ -2.45
NEDD4-211ENST00000514893 HMGN4O00479 90 aa-0.24□□□□□ -2.45
NEDD4-211ENST00000514893 COX6B1P14854 86 aa-0.24□□□□□ -2.45
NEDD4-211ENST00000514893 PPP3R2Q96LZ3 170 aa-0.24□□□□□ -2.45
NEDD4-211ENST00000514893 LINC00470Q9BZP3 86 aa-0.24□□□□□ -2.45
NEDD4-211ENST00000514893 PAIP2BQ9ULR5 123 aaKnown RBP-0.24□□□□□ -2.45
NEDD4-211ENST00000514893 CPSF1Q10570 1443 aaKnown RBP-0.24□□□□□ -2.45
NEDD4-211ENST00000514893 GVINP1Q7Z2Y8 2422 aa-0.24□□□□□ -2.45
NEDD4-211ENST00000514893 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.24□□□□□ -2.45
NEDD4-211ENST00000514893 POLA1P09884 1462 aaPredicted RBP-0.24□□□□□ -2.45
NEDD4-211ENST00000514893 MAP1BP46821 2468 aaKnown RBP-0.24□□□□□ -2.45
NEDD4-211ENST00000514893 RIMS1Q86UR5 1692 aaKnown RBP-0.24□□□□□ -2.45
NEDD4-211ENST00000514893 MYCBP2O75592 4640 aa-0.25□□□□□ -2.45
NEDD4-211ENST00000514893 SRRM2Q9UQ35 2752 aaKnown RBP-0.25□□□□□ -2.45
NEDD4-211ENST00000514893 CHKB-CPT1BH3BT56 60 aa-0.25□□□□□ -2.45
NEDD4-211ENST00000514893 SFT2D2O95562 160 aa-0.25□□□□□ -2.45
NEDD4-211ENST00000514893 SPRR1BP22528 89 aa-0.25□□□□□ -2.45
NEDD4-211ENST00000514893 UBA52P62987 128 aaKnown RBP-0.25□□□□□ -2.45
NEDD4-211ENST00000514893 MYOZ3Q8TDC0 251 aa-0.25□□□□□ -2.45
NEDD4-211ENST00000514893 AMELXQ99217 191 aa-0.25□□□□□ -2.45
NEDD4-211ENST00000514893 NAIPQ13075 1403 aa-0.25□□□□□ -2.45
NEDD4-211ENST00000514893 SPTBN1Q01082 2364 aaKnown RBP-0.25□□□□□ -2.45
NEDD4-211ENST00000514893 LRP2P98164 4655 aa-0.25□□□□□ -2.45
NEDD4-211ENST00000514893 PDZD2O15018 2839 aa-0.26□□□□□ -2.45
NEDD4-211ENST00000514893 USF3Q68DE3 2245 aa-0.26□□□□□ -2.45
NEDD4-211ENST00000514893 MYH7P12883 1935 aa-0.26□□□□□ -2.45
NEDD4-211ENST00000514893 BTAF1O14981 1849 aa-0.26□□□□□ -2.45
NEDD4-211ENST00000514893 KTN1Q86UP2 1357 aaKnown RBP-0.26□□□□□ -2.45
NEDD4-211ENST00000514893 SYS1-DBNDD2H3BUS1 97 aa-0.26□□□□□ -2.45
NEDD4-211ENST00000514893 SNAPC5O75971 98 aa-0.26□□□□□ -2.45
NEDD4-211ENST00000514893 IFNGP01579 166 aa-0.26□□□□□ -2.45
NEDD4-211ENST00000514893 APOC2P02655 101 aa-0.26□□□□□ -2.45
NEDD4-211ENST00000514893 Q56UQ5 140 aa-0.26□□□□□ -2.45
NEDD4-211ENST00000514893 MRPL54Q6P161 138 aaKnown RBP-0.26□□□□□ -2.45
NEDD4-211ENST00000514893 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.26□□□□□ -2.45
NEDD4-211ENST00000514893 SNRNP25Q9BV90 132 aaKnown RBP-0.26□□□□□ -2.45
NEDD4-211ENST00000514893 UQCR10Q9UDW1 63 aa-0.26□□□□□ -2.45
NEDD4-211ENST00000514893 PI4KAP42356 2102 aa-0.26□□□□□ -2.45
NEDD4-211ENST00000514893 PSME4Q14997 1843 aa-0.27□□□□□ -2.45
NEDD4-211ENST00000514893 LPAP08519 4548 aa-0.27□□□□□ -2.45
NEDD4-211ENST00000514893 MGPP08493 103 aa-0.27□□□□□ -2.45
NEDD4-211ENST00000514893 SELENOWP63302 87 aa-0.27□□□□□ -2.45
NEDD4-211ENST00000514893 KLK9Q2XQG4 91 aa-0.27□□□□□ -2.45
NEDD4-211ENST00000514893 C9orf153Q5TBE3 101 aa-0.27□□□□□ -2.45
NEDD4-211ENST00000514893 SFTA2Q6UW10 78 aa-0.27□□□□□ -2.45
NEDD4-211ENST00000514893 LINC00472Q9H8W2 130 aa-0.27□□□□□ -2.45
NEDD4-211ENST00000514893 NBEAL1Q6ZS30 2694 aa-0.27□□□□□ -2.45
NEDD4-211ENST00000514893 HECTD4Q9Y4D8 3996 aa-0.27□□□□□ -2.45
NEDD4-211ENST00000514893 MBD5Q9P267 1494 aa-0.28□□□□□ -2.45
NEDD4-211ENST00000514893 SHANK2Q9UPX8 1470 aa-0.28□□□□□ -2.45
NEDD4-211ENST00000514893 FLNBO75369 2602 aaKnown RBP-0.28□□□□□ -2.45
NEDD4-211ENST00000514893 SPTA1P02549 2419 aa-0.28□□□□□ -2.45
NEDD4-211ENST00000514893 FOCADQ5VW36 1801 aa-0.28□□□□□ -2.45
NEDD4-211ENST00000514893 LOC285095A0A1B0GVY8 99 aa-0.28□□□□□ -2.45
NEDD4-211ENST00000514893 AKAIN1P0CW23 69 aa-0.28□□□□□ -2.45
NEDD4-211ENST00000514893 GNG11P61952 73 aa-0.28□□□□□ -2.45
NEDD4-211ENST00000514893 FAM223AQ8IWN6 122 aa-0.28□□□□□ -2.45
NEDD4-211ENST00000514893 C8orf59Q8N0T1 100 aaPredicted RBP-0.28□□□□□ -2.45
NEDD4-211ENST00000514893 NXT2Q9NPJ8 142 aaKnown RBP-0.28□□□□□ -2.45
NEDD4-211ENST00000514893 MANBALQ9NQG1 85 aa-0.28□□□□□ -2.45
NEDD4-211ENST00000514893 LINC01558Q9Y6Z2 57 aa-0.28□□□□□ -2.45
NEDD4-211ENST00000514893 ARL2-SNX15V9GYD0 113 aa-0.28□□□□□ -2.45
NEDD4-211ENST00000514893 ROBO1Q9Y6N7 1651 aa-0.28□□□□□ -2.45
NEDD4-211ENST00000514893 TCHHQ07283 1943 aa-0.28□□□□□ -2.46
NEDD4-211ENST00000514893 CSPG4Q6UVK1 2322 aa-0.29□□□□□ -2.46
NEDD4-211ENST00000514893 CUL7Q14999 1698 aa-0.29□□□□□ -2.46
NEDD4-211ENST00000514893 LOC100130705A0A1B0GUX0 176 aa-0.29□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 162.1 ms