RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 TMEM243Q9BU79 118 aa8.95□□□□□ -0.98
PVT1-203ENST00000513868 TRBV25-1A0A075B6N4 114 aa8.94□□□□□ -0.98
PVT1-203ENST00000513868 A0A0J9YY99 117 aa8.94□□□□□ -0.98
PVT1-203ENST00000513868 F5H768 121 aa8.94□□□□□ -0.98
PVT1-203ENST00000513868 HNRNPA3P51991 378 aaKnown RBP8.94□□□□□ -0.98
PVT1-203ENST00000513868 CTAG1AP78358 180 aa8.94□□□□□ -0.98
PVT1-203ENST00000513868 MRPS16Q9Y3D3 137 aaKnown RBP8.94□□□□□ -0.98
PVT1-203ENST00000513868 TRAV26-1A0A087WT03 109 aa8.94□□□□□ -0.98
PVT1-203ENST00000513868 A0A0J9YXV3 536 aa8.94□□□□□ -0.98
PVT1-203ENST00000513868 NMUP48645 174 aa8.94□□□□□ -0.98
PVT1-203ENST00000513868 LURAP1LQ8IV03 231 aa8.94□□□□□ -0.98
PVT1-203ENST00000513868 TM2D3Q9BRN9 247 aa8.94□□□□□ -0.98
PVT1-203ENST00000513868 H7C423 109 aa8.93□□□□□ -0.98
PVT1-203ENST00000513868 DLEU1O43261 78 aa8.93□□□□□ -0.98
PVT1-203ENST00000513868 TMEM97Q5BJF2 176 aa8.93□□□□□ -0.98
PVT1-203ENST00000513868 C2orf91Q6ZV80 131 aa8.93□□□□□ -0.98
PVT1-203ENST00000513868 SNHG12Q9BXW3 62 aa8.93□□□□□ -0.98
PVT1-203ENST00000513868 TTTY13Q9BZ97 58 aa8.93□□□□□ -0.98
PVT1-203ENST00000513868 A0A0J9YWU9 116 aa8.92□□□□□ -0.98
PVT1-203ENST00000513868 HTN3P15516 51 aa8.92□□□□□ -0.98
PVT1-203ENST00000513868 CHAC1Q9BUX1 264 aa8.92□□□□□ -0.98
PVT1-203ENST00000513868 CDC42SE2Q9NRR3 84 aa8.92□□□□□ -0.98
PVT1-203ENST00000513868 COL7A1Q02388 2944 aa8.92□□□□□ -0.98
PVT1-203ENST00000513868 HUWE1Q7Z6Z7 4374 aaKnown RBP8.92□□□□□ -0.98
PVT1-203ENST00000513868 A0A096LPF7 62 aa8.91□□□□□ -0.98
PVT1-203ENST00000513868 E9PLD3 99 aa8.91□□□□□ -0.98
PVT1-203ENST00000513868 EREGO14944 169 aa8.91□□□□□ -0.98
PVT1-203ENST00000513868 ZNF22P17026 224 aaPredicted RBP8.91□□□□□ -0.98
PVT1-203ENST00000513868 DEFB121Q5J5C9 76 aa8.91□□□□□ -0.98
PVT1-203ENST00000513868 DGAT2L7PQ6IED9 249 aa8.91□□□□□ -0.98
PVT1-203ENST00000513868 MAPKAPK5-AS1Q8N8E1 139 aa8.91□□□□□ -0.98
PVT1-203ENST00000513868 UBE2L6O14933 153 aa8.91□□□□□ -0.98
PVT1-203ENST00000513868 UBE2D1P51668 147 aa8.91□□□□□ -0.98
PVT1-203ENST00000513868 SPATA25Q9BR10 227 aa8.91□□□□□ -0.98
PVT1-203ENST00000513868 GAGE6Q13070 117 aa8.9□□□□□ -0.98
PVT1-203ENST00000513868 TMEM170BQ5T4T1 132 aa8.9□□□□□ -0.98
PVT1-203ENST00000513868 Q6ZTC4 211 aa8.9□□□□□ -0.98
PVT1-203ENST00000513868 OR5A1Q8NGJ0 315 aa8.9□□□□□ -0.98
PVT1-203ENST00000513868 TINCRA0A1B0GVN0 87 aa8.89□□□□□ -0.99
PVT1-203ENST00000513868 TMEM223A0PJW6 202 aa8.89□□□□□ -0.99
PVT1-203ENST00000513868 M0R143 59 aa8.89□□□□□ -0.99
PVT1-203ENST00000513868 ZNF25P17030 456 aaPredicted RBP8.89□□□□□ -0.99
PVT1-203ENST00000513868 SMAGPQ0VAQ4 97 aa8.89□□□□□ -0.99
PVT1-203ENST00000513868 AMMECR1LQ6DCA0 310 aa8.89□□□□□ -0.99
PVT1-203ENST00000513868 FAM19A3Q7Z5A8 133 aa8.89□□□□□ -0.99
PVT1-203ENST00000513868 MRAPQ8TCY5 172 aa8.89□□□□□ -0.99
PVT1-203ENST00000513868 C2orf88Q9BSF0 95 aa8.89□□□□□ -0.99
PVT1-203ENST00000513868 CHCHD5Q9BSY4 110 aa8.89□□□□□ -0.99
PVT1-203ENST00000513868 IGLV4-60A0A075B6I1 120 aa8.88□□□□□ -0.99
PVT1-203ENST00000513868 TRAV8-6A0A0B4J262 113 aa8.88□□□□□ -0.99
PVT1-203ENST00000513868 SIVA1O15304 175 aa8.88□□□□□ -0.99
PVT1-203ENST00000513868 MRPL23Q16540 153 aaKnown RBP8.88□□□□□ -0.99
PVT1-203ENST00000513868 NANOS2P60321 138 aaKnown RBP8.88□□□□□ -0.99
PVT1-203ENST00000513868 ICOSQ9Y6W8 199 aa8.88□□□□□ -0.99
PVT1-203ENST00000513868 H3BNG1 76 aa8.87□□□□□ -0.99
PVT1-203ENST00000513868 TIRAPP58753 221 aa8.87□□□□□ -0.99
PVT1-203ENST00000513868 TSPEAR-AS2P59090 65 aa8.87□□□□□ -0.99
PVT1-203ENST00000513868 HERVK_113P61574 105 aa8.87□□□□□ -0.99
PVT1-203ENST00000513868 COX6A2Q02221 97 aa8.87□□□□□ -0.99
PVT1-203ENST00000513868 LINC00242Q5T6M2 205 aa8.87□□□□□ -0.99
PVT1-203ENST00000513868 C11orf45Q8TAV5 145 aa8.87□□□□□ -0.99
PVT1-203ENST00000513868 TMEM101Q96IK0 257 aa8.87□□□□□ -0.99
PVT1-203ENST00000513868 IGLV5-45A0A087WSX0 123 aa8.86□□□□□ -0.99
PVT1-203ENST00000513868 A0A1B0GUV1 79 aa8.85□□□□□ -0.99
PVT1-203ENST00000513868 MPV17L2Q567V2 206 aa8.85□□□□□ -0.99
PVT1-203ENST00000513868 DNAH9Q9NYC9 4486 aa8.85□□□□□ -0.99
PVT1-203ENST00000513868 MYMXA0A1B0GTQ4 84 aa8.85□□□□□ -0.99
PVT1-203ENST00000513868 HINT1P49773 126 aaPredicted RBP8.85□□□□□ -0.99
PVT1-203ENST00000513868 SH2D6Q7Z4S9 175 aa8.85□□□□□ -0.99
PVT1-203ENST00000513868 HIGD1BQ9P298 99 aa8.85□□□□□ -0.99
PVT1-203ENST00000513868 CDKN2A-AS1Q9UH64 79 aa8.85□□□□□ -0.99
PVT1-203ENST00000513868 TRAV13-1A0A0B4J241 112 aa8.84□□□□□ -0.99
PVT1-203ENST00000513868 LEPROTO15243 131 aa8.84□□□□□ -0.99
PVT1-203ENST00000513868 RBX1P62877 108 aa8.84□□□□□ -0.99
PVT1-203ENST00000513868 LBHQ53QV2 105 aaPredicted RBP8.84□□□□□ -0.99
PVT1-203ENST00000513868 GEMIN7Q9H840 131 aaKnown RBP8.84□□□□□ -0.99
PVT1-203ENST00000513868 IGHV3-64A0A075B6Q5 118 aa8.83□□□□□ -1
PVT1-203ENST00000513868 TRAV8-3A0A0A6YYJ7 113 aa8.83□□□□□ -1
PVT1-203ENST00000513868 HERVK_113P63121 156 aa8.83□□□□□ -1
PVT1-203ENST00000513868 BATFQ16520 125 aa8.83□□□□□ -1
PVT1-203ENST00000513868 LYPD5Q6UWN5 251 aa8.83□□□□□ -1
PVT1-203ENST00000513868 LINC00469Q8N7U9 141 aa8.83□□□□□ -1
PVT1-203ENST00000513868 DEFB131BA0A096LNP1 70 aa8.82□□□□□ -1
PVT1-203ENST00000513868 ZNF815PA8K554 130 aa8.82□□□□□ -1
PVT1-203ENST00000513868 TMEM262E9PQX1 116 aa8.82□□□□□ -1
PVT1-203ENST00000513868 J3QQQ9 107 aa8.82□□□□□ -1
PVT1-203ENST00000513868 BVES-AS1Q5T3Y7 98 aa8.82□□□□□ -1
PVT1-203ENST00000513868 LELP1Q5T871 98 aa8.82□□□□□ -1
PVT1-203ENST00000513868 IGHV1-58A0A0C4DH39 117 aa8.81□□□□□ -1
PVT1-203ENST00000513868 SPINK8P0C7L1 97 aa8.81□□□□□ -1
PVT1-203ENST00000513868 IGHV3-30-3P0DP02 117 aa8.81□□□□□ -1
PVT1-203ENST00000513868 SEC11AP67812 179 aa8.81□□□□□ -1
PVT1-203ENST00000513868 Q8N3U1 123 aa8.81□□□□□ -1
PVT1-203ENST00000513868 PLEKHB2Q96CS7 222 aa8.81□□□□□ -1
PVT1-203ENST00000513868 STAB2Q8WWQ8 2551 aa8.81□□□□□ -1
PVT1-203ENST00000513868 HSD52Q0P140 79 aa8.8□□□□□ -1
PVT1-203ENST00000513868 IGKV3OR2-268A0A0C4DH90 116 aa8.79□□□□□ -1
PVT1-203ENST00000513868 IGLV5-39A0A0G2JS06 123 aa8.79□□□□□ -1
PVT1-203ENST00000513868 LINC00959A0A1B0GUT2 108 aa8.79□□□□□ -1
PVT1-203ENST00000513868 LGALS3P17931 250 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms