RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, human

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KDM3B-208	ENST00000512928	FAM104B	Q5XKR9	115 aa		4.28	□□□□□ -1.72
KDM3B-208	ENST00000512928	AMMECR1L	Q6DCA0	310 aa		4.28	□□□□□ -1.72
KDM3B-208	ENST00000512928	RNASEK	Q6P5S7	137 aa	Known RBP	4.28	□□□□□ -1.72
KDM3B-208	ENST00000512928	TMEM70	Q9BUB7	260 aa		4.28	□□□□□ -1.72
KDM3B-208	ENST00000512928	IGLV4-60	A0A075B6I1	120 aa		4.27	□□□□□ -1.73
KDM3B-208	ENST00000512928	TRBV24-1	A0A075B6N3	115 aa		4.27	□□□□□ -1.73
KDM3B-208	ENST00000512928	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	4.27	□□□□□ -1.73
KDM3B-208	ENST00000512928	IGKV2-29	A2NJV5	120 aa	Predicted RBP	4.27	□□□□□ -1.73
KDM3B-208	ENST00000512928	SDHAF1	A6NFY7	115 aa		4.27	□□□□□ -1.73
KDM3B-208	ENST00000512928	USP17L23	D6RBM5	183 aa		4.27	□□□□□ -1.73
KDM3B-208	ENST00000512928	GAS8-AS1	O95177	125 aa		4.27	□□□□□ -1.73
KDM3B-208	ENST00000512928	PMCH	P20382	165 aa		4.27	□□□□□ -1.73
KDM3B-208	ENST00000512928	HBB	P68871	147 aa		4.27	□□□□□ -1.73
KDM3B-208	ENST00000512928	RIG	Q13278	110 aa		4.27	□□□□□ -1.73
KDM3B-208	ENST00000512928	NRAC	Q8N912	160 aa		4.27	□□□□□ -1.73
KDM3B-208	ENST00000512928	FAM30A	Q9NZY2	134 aa		4.27	□□□□□ -1.73
KDM3B-208	ENST00000512928	FAT1	Q14517	4588 aa		4.27	□□□□□ -1.73
KDM3B-208	ENST00000512928		I3L3M4	83 aa		4.26	□□□□□ -1.73
KDM3B-208	ENST00000512928	PHOX2A	O14813	284 aa		4.26	□□□□□ -1.73
KDM3B-208	ENST00000512928	NCR2	O95944	276 aa		4.26	□□□□□ -1.73
KDM3B-208	ENST00000512928	INAFM2	P0DMQ5	153 aa		4.26	□□□□□ -1.73
KDM3B-208	ENST00000512928	RPS10	P46783	165 aa	Known RBP	4.26	□□□□□ -1.73
KDM3B-208	ENST00000512928	POLR2K	P53803	58 aa	Known RBP	4.26	□□□□□ -1.73
KDM3B-208	ENST00000512928	PET117	Q6UWS5	81 aa		4.26	□□□□□ -1.73
KDM3B-208	ENST00000512928	TMEM136	Q6ZRR5	245 aa		4.26	□□□□□ -1.73
KDM3B-208	ENST00000512928	AMN1	Q8IY45	258 aa		4.26	□□□□□ -1.73
KDM3B-208	ENST00000512928	C20orf203	Q8NBC4	194 aa		4.26	□□□□□ -1.73
KDM3B-208	ENST00000512928	MRAP2	Q96G30	205 aa		4.26	□□□□□ -1.73
KDM3B-208	ENST00000512928	BTF3L4	Q96K17	158 aa		4.26	□□□□□ -1.73
KDM3B-208	ENST00000512928	ST20	Q9HBF5	79 aa		4.26	□□□□□ -1.73
KDM3B-208	ENST00000512928	PRR34	Q9NV39	138 aa		4.26	□□□□□ -1.73
KDM3B-208	ENST00000512928	DNAH8	Q96JB1	4490 aa		4.26	□□□□□ -1.73
KDM3B-208	ENST00000512928	TRAV8-4	A0A0B4J246	113 aa		4.25	□□□□□ -1.73
KDM3B-208	ENST00000512928	TRBV27	A0A0K0K1C4	114 aa		4.25	□□□□□ -1.73
KDM3B-208	ENST00000512928		A0A1B0GUV1	79 aa		4.25	□□□□□ -1.73
KDM3B-208	ENST00000512928	hDV102S1	A0JD36	115 aa		4.25	□□□□□ -1.73
KDM3B-208	ENST00000512928	SMKR1	H3BMG3	65 aa		4.25	□□□□□ -1.73
KDM3B-208	ENST00000512928	S100A8	P05109	93 aa		4.25	□□□□□ -1.73
KDM3B-208	ENST00000512928	FCER1G	P30273	86 aa		4.25	□□□□□ -1.73
KDM3B-208	ENST00000512928	CAMP	P49913	170 aa		4.25	□□□□□ -1.73
KDM3B-208	ENST00000512928	MRPL51	Q4U2R6	128 aa	Known RBP	4.25	□□□□□ -1.73
KDM3B-208	ENST00000512928	MRPL54	Q6P161	138 aa	Known RBP	4.25	□□□□□ -1.73
KDM3B-208	ENST00000512928	TMEM101	Q96IK0	257 aa		4.25	□□□□□ -1.73
KDM3B-208	ENST00000512928	SRRM2	Q9UQ35	2752 aa	Known RBP	4.25	□□□□□ -1.73
KDM3B-208	ENST00000512928	GAGE12H	A6NDE8	117 aa		4.24	□□□□□ -1.73
KDM3B-208	ENST00000512928	PPBP	P02775	128 aa		4.24	□□□□□ -1.73
KDM3B-208	ENST00000512928	PRSS1	P07477	247 aa		4.24	□□□□□ -1.73
KDM3B-208	ENST00000512928	FGF6	P10767	208 aa		4.24	□□□□□ -1.73
KDM3B-208	ENST00000512928	COX19	Q49B96	90 aa		4.24	□□□□□ -1.73
KDM3B-208	ENST00000512928	SCX	Q7RTU7	201 aa		4.24	□□□□□ -1.73
KDM3B-208	ENST00000512928	GNB1L	Q9BYB4	327 aa		4.24	□□□□□ -1.73
KDM3B-208	ENST00000512928	SMCO4	Q9NRQ5	59 aa		4.24	□□□□□ -1.73
KDM3B-208	ENST00000512928	AP5S1	Q9NUS5	200 aa		4.24	□□□□□ -1.73
KDM3B-208	ENST00000512928	LAMTOR2	Q9Y2Q5	125 aa		4.24	□□□□□ -1.73
KDM3B-208	ENST00000512928	LINC01546	A6NGU7	62 aa		4.23	□□□□□ -1.73
KDM3B-208	ENST00000512928		H7C423	109 aa		4.23	□□□□□ -1.73
KDM3B-208	ENST00000512928	PPP1R17	O96001	155 aa		4.23	□□□□□ -1.73
KDM3B-208	ENST00000512928	TSHB	P01222	138 aa		4.23	□□□□□ -1.73
KDM3B-208	ENST00000512928	MT-ND6	P03923	174 aa		4.23	□□□□□ -1.73
KDM3B-208	ENST00000512928	PLA2G1B	P04054	148 aa	Known RBP	4.23	□□□□□ -1.73
KDM3B-208	ENST00000512928	ESD	P10768	282 aa		4.23	□□□□□ -1.73
KDM3B-208	ENST00000512928	S100P	P25815	95 aa		4.23	□□□□□ -1.73
KDM3B-208	ENST00000512928	DGAT2L7P	Q6IED9	249 aa		4.23	□□□□□ -1.73
KDM3B-208	ENST00000512928	KRTAP26-1	Q6PEX3	210 aa		4.23	□□□□□ -1.73
KDM3B-208	ENST00000512928		Q6ZSA8	131 aa		4.23	□□□□□ -1.73
KDM3B-208	ENST00000512928	OR5A1	Q8NGJ0	315 aa		4.23	□□□□□ -1.73
KDM3B-208	ENST00000512928	C20orf78	Q9BR46	151 aa		4.23	□□□□□ -1.73
KDM3B-208	ENST00000512928	CHAC1	Q9BUX1	264 aa		4.23	□□□□□ -1.73
KDM3B-208	ENST00000512928	RPS10P5	Q9NQ39	176 aa		4.23	□□□□□ -1.73
KDM3B-208	ENST00000512928	VPS13B	Q7Z7G8	4022 aa		4.22	□□□□□ -1.73
KDM3B-208	ENST00000512928	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	4.22	□□□□□ -1.73
KDM3B-208	ENST00000512928		D6R8Y8	96 aa		4.22	□□□□□ -1.73
KDM3B-208	ENST00000512928	VCY	O14598	125 aa		4.22	□□□□□ -1.73
KDM3B-208	ENST00000512928	ZNF25	P17030	456 aa	Predicted RBP	4.22	□□□□□ -1.73
KDM3B-208	ENST00000512928	CKS2	P33552	79 aa		4.22	□□□□□ -1.73
KDM3B-208	ENST00000512928	XCL1	P47992	114 aa		4.22	□□□□□ -1.73
KDM3B-208	ENST00000512928	SUMO2	P61956	95 aa	Known RBP	4.22	□□□□□ -1.73
KDM3B-208	ENST00000512928	HIGD2B	Q4VC39	106 aa		4.22	□□□□□ -1.73
KDM3B-208	ENST00000512928	CBLN2	Q8IUK8	224 aa		4.22	□□□□□ -1.73
KDM3B-208	ENST00000512928	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	4.22	□□□□□ -1.73
KDM3B-208	ENST00000512928	DPH3	Q96FX2	82 aa		4.22	□□□□□ -1.73
KDM3B-208	ENST00000512928	KIR2DL4	Q99706	377 aa		4.22	□□□□□ -1.73
KDM3B-208	ENST00000512928	FLG2	Q5D862	2391 aa	Predicted RBP	4.21	□□□□□ -1.73
KDM3B-208	ENST00000512928	TGIF2-C20orf24	A0A0A6YYL0	155 aa		4.21	□□□□□ -1.74
KDM3B-208	ENST00000512928	COLCA2	A8K830	154 aa		4.21	□□□□□ -1.74
KDM3B-208	ENST00000512928	TNFRSF6B	O95407	300 aa		4.21	□□□□□ -1.74
KDM3B-208	ENST00000512928	NPY	P01303	97 aa		4.21	□□□□□ -1.74
KDM3B-208	ENST00000512928	LINC00518	Q8N0U6	118 aa		4.21	□□□□□ -1.74
KDM3B-208	ENST00000512928	ORMDL3	Q8N138	153 aa		4.21	□□□□□ -1.74
KDM3B-208	ENST00000512928	CIRBP-AS1	Q8TBR5	109 aa		4.21	□□□□□ -1.74
KDM3B-208	ENST00000512928	FAM104A	Q969W3	186 aa		4.21	□□□□□ -1.74
KDM3B-208	ENST00000512928	ALKBH7	Q9BT30	221 aa	Predicted RBP	4.21	□□□□□ -1.74
KDM3B-208	ENST00000512928	SMIM2	Q9BVW6	85 aa		4.21	□□□□□ -1.74
KDM3B-208	ENST00000512928	MYCBP2	O75592	4640 aa		4.2	□□□□□ -1.74
KDM3B-208	ENST00000512928	IGHV3-64	A0A075B6Q5	118 aa		4.2	□□□□□ -1.74
KDM3B-208	ENST00000512928	PCP4L1	A6NKN8	68 aa		4.2	□□□□□ -1.74
KDM3B-208	ENST00000512928	CCL25	O15444	150 aa		4.2	□□□□□ -1.74
KDM3B-208	ENST00000512928	SCGB1D1	O95968	90 aa		4.2	□□□□□ -1.74
KDM3B-208	ENST00000512928	SMAGP	Q0VAQ4	97 aa		4.2	□□□□□ -1.74
KDM3B-208	ENST00000512928	SS18	Q15532	418 aa		4.2	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms