RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 UBE2L6O14933 153 aa4.4□□□□□ -1.71
RFC1-215ENST00000512881 AMTP48728 403 aa4.4□□□□□ -1.71
RFC1-215ENST00000512881 COTL1Q14019 142 aa4.4□□□□□ -1.71
RFC1-215ENST00000512881 GATD1Q8NB37 220 aa4.4□□□□□ -1.71
RFC1-215ENST00000512881 CNFNQ9BYD5 112 aa4.4□□□□□ -1.71
RFC1-215ENST00000512881 RPP21Q9H633 154 aaKnown RBP4.4□□□□□ -1.71
RFC1-215ENST00000512881 TRAV26-2A0A0B4J265 109 aa4.39□□□□□ -1.71
RFC1-215ENST00000512881 hDV102S1A0JD36 115 aa4.39□□□□□ -1.71
RFC1-215ENST00000512881 PANO1I0J062 215 aa4.39□□□□□ -1.71
RFC1-215ENST00000512881 OXTP01178 125 aa4.39□□□□□ -1.71
RFC1-215ENST00000512881 FOXA3P55318 350 aaPredicted RBP4.39□□□□□ -1.71
RFC1-215ENST00000512881 RPL37AP61513 92 aaKnown RBP4.39□□□□□ -1.71
RFC1-215ENST00000512881 CNBPP62633 177 aaKnown RBP4.39□□□□□ -1.71
RFC1-215ENST00000512881 SMIM15Q7Z3B0 74 aa4.39□□□□□ -1.71
RFC1-215ENST00000512881 GTSF1Q8WW33 167 aa4.39□□□□□ -1.71
RFC1-215ENST00000512881 TMEM250H0YL14 139 aa4.38□□□□□ -1.71
RFC1-215ENST00000512881 GATCO43716 136 aaKnown RBP4.38□□□□□ -1.71
RFC1-215ENST00000512881 RPL39LQ96EH5 51 aaKnown RBP4.38□□□□□ -1.71
RFC1-215ENST00000512881 DPH3Q96FX2 82 aa4.38□□□□□ -1.71
RFC1-215ENST00000512881 TNXBP22105 4242 aa4.38□□□□□ -1.71
RFC1-215ENST00000512881 IGHV3-64A0A075B6Q5 118 aa4.37□□□□□ -1.71
RFC1-215ENST00000512881 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.37□□□□□ -1.71
RFC1-215ENST00000512881 IGKV3OR2-268A0A0C4DH90 116 aa4.37□□□□□ -1.71
RFC1-215ENST00000512881 A8MWL6 223 aa4.37□□□□□ -1.71
RFC1-215ENST00000512881 TNFRSF6BO95407 300 aa4.37□□□□□ -1.71
RFC1-215ENST00000512881 NCR2O95944 276 aa4.37□□□□□ -1.71
RFC1-215ENST00000512881 CIRBPQ14011 172 aaKnown RBP4.37□□□□□ -1.71
RFC1-215ENST00000512881 AMMECR1LQ6DCA0 310 aa4.37□□□□□ -1.71
RFC1-215ENST00000512881 CFAP161Q6P656 301 aa4.37□□□□□ -1.71
RFC1-215ENST00000512881 TEX261Q6UWH6 196 aa4.37□□□□□ -1.71
RFC1-215ENST00000512881 ALKAL2Q6UX46 152 aa4.37□□□□□ -1.71
RFC1-215ENST00000512881 FAM231DQ6ZW35 169 aa4.37□□□□□ -1.71
RFC1-215ENST00000512881 AKAP14Q86UN6 197 aa4.37□□□□□ -1.71
RFC1-215ENST00000512881 LYPD6BQ8NI32 183 aa4.37□□□□□ -1.71
RFC1-215ENST00000512881 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.36□□□□□ -1.71
RFC1-215ENST00000512881 IGKV2-29A2NJV5 120 aaPredicted RBP4.36□□□□□ -1.71
RFC1-215ENST00000512881 SDHAF1A6NFY7 115 aa4.36□□□□□ -1.71
RFC1-215ENST00000512881 H7C423 109 aa4.36□□□□□ -1.71
RFC1-215ENST00000512881 APCSP02743 223 aa4.36□□□□□ -1.71
RFC1-215ENST00000512881 FGF6P10767 208 aa4.36□□□□□ -1.71
RFC1-215ENST00000512881 PMCHP20382 165 aa4.36□□□□□ -1.71
RFC1-215ENST00000512881 HNRNPA3P51991 378 aaKnown RBP4.36□□□□□ -1.71
RFC1-215ENST00000512881 CEBPGP53567 150 aa4.36□□□□□ -1.71
RFC1-215ENST00000512881 SERTAD4-AS1Q5TG53 156 aa4.36□□□□□ -1.71
RFC1-215ENST00000512881 RNASEKQ6P5S7 137 aaKnown RBP4.36□□□□□ -1.71
RFC1-215ENST00000512881 C15orf56Q8N910 161 aa4.36□□□□□ -1.71
RFC1-215ENST00000512881 CHCHD10Q8WYQ3 142 aaPredicted RBP4.36□□□□□ -1.71
RFC1-215ENST00000512881 TRBV6-5A0A0K0K1A5 114 aa4.35□□□□□ -1.71
RFC1-215ENST00000512881 FAM231BA6NCW3 169 aa4.35□□□□□ -1.71
RFC1-215ENST00000512881 I3L3M4 83 aa4.35□□□□□ -1.71
RFC1-215ENST00000512881 GAS8-AS1O95177 125 aa4.35□□□□□ -1.71
RFC1-215ENST00000512881 PRSS2P07478 247 aa4.35□□□□□ -1.71
RFC1-215ENST00000512881 CHTF8P0CG12 524 aa4.35□□□□□ -1.71
RFC1-215ENST00000512881 RPS10P46783 165 aaKnown RBP4.35□□□□□ -1.71
RFC1-215ENST00000512881 HIGD2BQ4VC39 106 aa4.35□□□□□ -1.71
RFC1-215ENST00000512881 BORCS7Q96B45 105 aa4.35□□□□□ -1.71
RFC1-215ENST00000512881 RNF185Q96GF1 192 aa4.35□□□□□ -1.71
RFC1-215ENST00000512881 EIF5A2Q9GZV4 153 aaKnown RBP4.35□□□□□ -1.71
RFC1-215ENST00000512881 A0A0A0MQY5 61 aa4.34□□□□□ -1.71
RFC1-215ENST00000512881 A0A1B0GUT8 65 aa4.34□□□□□ -1.71
RFC1-215ENST00000512881 HIGD1CA8MV81 97 aa4.34□□□□□ -1.71
RFC1-215ENST00000512881 TSHBP01222 138 aa4.34□□□□□ -1.71
RFC1-215ENST00000512881 ESDP10768 282 aa4.34□□□□□ -1.71
RFC1-215ENST00000512881 COX6A2Q02221 97 aa4.34□□□□□ -1.71
RFC1-215ENST00000512881 LINC01551Q86U37 167 aa4.34□□□□□ -1.71
RFC1-215ENST00000512881 SPACA4Q8TDM5 124 aa4.34□□□□□ -1.71
RFC1-215ENST00000512881 TSKUQ8WUA8 353 aa4.34□□□□□ -1.71
RFC1-215ENST00000512881 TMEM101Q96IK0 257 aa4.34□□□□□ -1.71
RFC1-215ENST00000512881 SMIM7Q9BQ49 75 aa4.34□□□□□ -1.71
RFC1-215ENST00000512881 TMEM191AQ9H0A3 160 aa4.34□□□□□ -1.71
RFC1-215ENST00000512881 ST20Q9HBF5 79 aa4.34□□□□□ -1.71
RFC1-215ENST00000512881 GVQW2A0A096LPI5 108 aaPredicted RBP4.33□□□□□ -1.72
RFC1-215ENST00000512881 LINC00959A0A1B0GUT2 108 aa4.33□□□□□ -1.72
RFC1-215ENST00000512881 ZNF727A8MUV8 499 aa4.33□□□□□ -1.72
RFC1-215ENST00000512881 NDUFS6O75380 124 aaKnown RBP4.33□□□□□ -1.72
RFC1-215ENST00000512881 SRP19P09132 144 aaKnown RBP4.33□□□□□ -1.72
RFC1-215ENST00000512881 ZNF25P17030 456 aaPredicted RBP4.33□□□□□ -1.72
RFC1-215ENST00000512881 RAB4AP20338 218 aa4.33□□□□□ -1.72
RFC1-215ENST00000512881 XCL1P47992 114 aa4.33□□□□□ -1.72
RFC1-215ENST00000512881 POLR2KP53803 58 aaKnown RBP4.33□□□□□ -1.72
RFC1-215ENST00000512881 OR5A1Q8NGJ0 315 aa4.33□□□□□ -1.72
RFC1-215ENST00000512881 BTF3L4Q96K17 158 aa4.33□□□□□ -1.72
RFC1-215ENST00000512881 FAM210AQ96ND0 272 aa4.33□□□□□ -1.72
RFC1-215ENST00000512881 OSTCQ9NRP0 149 aa4.33□□□□□ -1.72
RFC1-215ENST00000512881 TMEM242Q9NWH2 141 aa4.33□□□□□ -1.72
RFC1-215ENST00000512881 PLAC8Q9NZF1 115 aa4.33□□□□□ -1.72
RFC1-215ENST00000512881 IGKV2-24A0A0C4DH68 120 aa4.32□□□□□ -1.72
RFC1-215ENST00000512881 TRBV27A0A0K0K1C4 114 aa4.32□□□□□ -1.72
RFC1-215ENST00000512881 VCYO14598 125 aa4.32□□□□□ -1.72
RFC1-215ENST00000512881 CCL25O15444 150 aa4.32□□□□□ -1.72
RFC1-215ENST00000512881 RIGQ13278 110 aa4.32□□□□□ -1.72
RFC1-215ENST00000512881 MAJINQ3KP22 176 aa4.32□□□□□ -1.72
RFC1-215ENST00000512881 Q6ZRU5 148 aa4.32□□□□□ -1.72
RFC1-215ENST00000512881 MRPL52Q86TS9 123 aaKnown RBP4.32□□□□□ -1.72
RFC1-215ENST00000512881 AMN1Q8IY45 258 aa4.32□□□□□ -1.72
RFC1-215ENST00000512881 ZNF664Q8N3J9 261 aa4.32□□□□□ -1.72
RFC1-215ENST00000512881 NUP35Q8NFH5 326 aa4.32□□□□□ -1.72
RFC1-215ENST00000512881 MRAP2Q96G30 205 aa4.32□□□□□ -1.72
RFC1-215ENST00000512881 CDC42SE2Q9NRR3 84 aa4.32□□□□□ -1.72
RFC1-215ENST00000512881 IGHV1-58A0A0C4DH39 117 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms