RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 DAZ3Q9NR90 486 aaKnown RBP6.86□□□□□ -1.31
MSH3-203ENST00000512531 ZNF815PA8K554 130 aa6.85□□□□□ -1.31
MSH3-203ENST00000512531 TAX1BP3O14907 124 aa6.85□□□□□ -1.31
MSH3-203ENST00000512531 TSHBP01222 138 aa6.85□□□□□ -1.31
MSH3-203ENST00000512531 RBMY1A1P0DJD3 496 aaKnown RBP6.85□□□□□ -1.31
MSH3-203ENST00000512531 RBMY1CP0DJD4 496 aa6.85□□□□□ -1.31
MSH3-203ENST00000512531 FABP2P12104 132 aa6.85□□□□□ -1.31
MSH3-203ENST00000512531 RBMY1FQ15415 496 aaKnown RBP6.85□□□□□ -1.31
MSH3-203ENST00000512531 NEGR1Q7Z3B1 354 aa6.85□□□□□ -1.31
MSH3-203ENST00000512531 NFE4Q86UQ8 179 aa6.85□□□□□ -1.31
MSH3-203ENST00000512531 C11orf72Q8NBR9 251 aa6.85□□□□□ -1.31
MSH3-203ENST00000512531 PRADC1Q9BSG0 188 aa6.85□□□□□ -1.31
MSH3-203ENST00000512531 TM2D2Q9BX73 214 aa6.85□□□□□ -1.31
MSH3-203ENST00000512531 DYNC2H1Q8NCM8 4307 aaKnown RBP6.84□□□□□ -1.31
MSH3-203ENST00000512531 IGHV3-73A0A0B4J1V6 119 aa6.84□□□□□ -1.31
MSH3-203ENST00000512531 GAGE10A6NGK3 116 aa6.84□□□□□ -1.31
MSH3-203ENST00000512531 TCTAP57738 103 aa6.84□□□□□ -1.31
MSH3-203ENST00000512531 SRSF9Q13242 221 aaKnown RBP eCLIP6.84□□□□□ -1.31
MSH3-203ENST00000512531 OR5A1Q8NGJ0 315 aa6.84□□□□□ -1.31
MSH3-203ENST00000512531 MRPL16Q9NX20 251 aaKnown RBP6.84□□□□□ -1.31
MSH3-203ENST00000512531 RYR2Q92736 4967 aa6.84□□□□□ -1.31
MSH3-203ENST00000512531 TRBV7-3A0A075B6L6 115 aa6.83□□□□□ -1.32
MSH3-203ENST00000512531 TRGV2A0A075B6R0 118 aa6.83□□□□□ -1.32
MSH3-203ENST00000512531 IGKV2D-26A0A0A0MRZ7 120 aa6.83□□□□□ -1.32
MSH3-203ENST00000512531 SMIM9A6NGZ8 99 aa6.83□□□□□ -1.32
MSH3-203ENST00000512531 K7EQD1 137 aa6.83□□□□□ -1.32
MSH3-203ENST00000512531 UBE2L6O14933 153 aa6.83□□□□□ -1.32
MSH3-203ENST00000512531 LEPROTO15243 131 aa6.83□□□□□ -1.32
MSH3-203ENST00000512531 RPL39P62891 51 aaKnown RBP6.83□□□□□ -1.32
MSH3-203ENST00000512531 ZNF124Q15973 351 aa6.83□□□□□ -1.32
MSH3-203ENST00000512531 UFSP1Q6NVU6 142 aa6.83□□□□□ -1.32
MSH3-203ENST00000512531 RNASE8Q8TDE3 154 aaKnown RBP6.83□□□□□ -1.32
MSH3-203ENST00000512531 TIMM21Q9BVV7 248 aa6.83□□□□□ -1.32
MSH3-203ENST00000512531 GEMIN7Q9H840 131 aaKnown RBP6.83□□□□□ -1.32
MSH3-203ENST00000512531 AGRNO00468 2067 aa6.82□□□□□ -1.32
MSH3-203ENST00000512531 H7C423 109 aa6.82□□□□□ -1.32
MSH3-203ENST00000512531 MRPS36P82909 103 aaKnown RBP6.82□□□□□ -1.32
MSH3-203ENST00000512531 CASC10Q5T4H9 136 aa6.82□□□□□ -1.32
MSH3-203ENST00000512531 C1orf158Q8N1D5 194 aa6.82□□□□□ -1.32
MSH3-203ENST00000512531 MUC7Q8TAX7 377 aa6.82□□□□□ -1.32
MSH3-203ENST00000512531 COPS9Q8WXC6 57 aa6.82□□□□□ -1.32
MSH3-203ENST00000512531 TMEM101Q96IK0 257 aa6.82□□□□□ -1.32
MSH3-203ENST00000512531 SORL1Q92673 2214 aa6.82□□□□□ -1.32
MSH3-203ENST00000512531 BIRC6Q9NR09 4857 aa6.82□□□□□ -1.32
MSH3-203ENST00000512531 IGLV4-69A0A075B6H9 119 aa6.81□□□□□ -1.32
MSH3-203ENST00000512531 IGLV4-3A0A075B6K6 122 aa6.81□□□□□ -1.32
MSH3-203ENST00000512531 TMEM238C9JI98 176 aa6.81□□□□□ -1.32
MSH3-203ENST00000512531 J3QQQ9 107 aa6.81□□□□□ -1.32
MSH3-203ENST00000512531 RPL35AP18077 110 aaKnown RBP6.81□□□□□ -1.32
MSH3-203ENST00000512531 IL17DQ8TAD2 202 aa6.81□□□□□ -1.32
MSH3-203ENST00000512531 SPANXB1Q9NS25 103 aaPredicted RBP6.81□□□□□ -1.32
MSH3-203ENST00000512531 TRGV4A0A0C4DH28 118 aa6.8□□□□□ -1.32
MSH3-203ENST00000512531 TINCRA0A1B0GVN0 87 aa6.8□□□□□ -1.32
MSH3-203ENST00000512531 TRBV6-4A0A1B0GX49 114 aa6.8□□□□□ -1.32
MSH3-203ENST00000512531 KRTAP23-1A1A580 65 aa6.8□□□□□ -1.32
MSH3-203ENST00000512531 APOC4P55056 127 aa6.8□□□□□ -1.32
MSH3-203ENST00000512531 AMMECR1LQ6DCA0 310 aa6.8□□□□□ -1.32
MSH3-203ENST00000512531 ZNRF2Q8NHG8 242 aa6.8□□□□□ -1.32
MSH3-203ENST00000512531 AMELXQ99217 191 aa6.8□□□□□ -1.32
MSH3-203ENST00000512531 OVOL2Q9BRP0 275 aa6.8□□□□□ -1.32
MSH3-203ENST00000512531 TENM2Q9NT68 2774 aa6.8□□□□□ -1.32
MSH3-203ENST00000512531 NHP2Q9NX24 153 aaKnown RBP6.8□□□□□ -1.32
MSH3-203ENST00000512531 TMEM223A0PJW6 202 aa6.79□□□□□ -1.32
MSH3-203ENST00000512531 H3BUT2 72 aa6.79□□□□□ -1.32
MSH3-203ENST00000512531 P0DMU3 169 aa6.79□□□□□ -1.32
MSH3-203ENST00000512531 FAM231AP0DMU4 169 aa6.79□□□□□ -1.32
MSH3-203ENST00000512531 FAM231CP0DMU5 169 aa6.79□□□□□ -1.32
MSH3-203ENST00000512531 HERVK_113P63121 156 aa6.79□□□□□ -1.32
MSH3-203ENST00000512531 RPL24P83731 157 aaKnown RBP6.79□□□□□ -1.32
MSH3-203ENST00000512531 Q6ZVH6 145 aa6.79□□□□□ -1.32
MSH3-203ENST00000512531 LYSTQ99698 3801 aa6.79□□□□□ -1.32
MSH3-203ENST00000512531 GTSF1LQ9H1H1 148 aa6.79□□□□□ -1.32
MSH3-203ENST00000512531 NOP10Q9NPE3 64 aaKnown RBP6.79□□□□□ -1.32
MSH3-203ENST00000512531 CSDC2Q9Y534 153 aaKnown RBP6.79□□□□□ -1.32
MSH3-203ENST00000512531 SACSQ9NZJ4 4579 aa6.78□□□□□ -1.32
MSH3-203ENST00000512531 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.78□□□□□ -1.32
MSH3-203ENST00000512531 LCE6AA0A183 80 aa6.78□□□□□ -1.32
MSH3-203ENST00000512531 A0A1W2PPM0 123 aa6.78□□□□□ -1.32
MSH3-203ENST00000512531 K7EP34 96 aa6.78□□□□□ -1.32
MSH3-203ENST00000512531 CIRBPQ14011 172 aaKnown RBP6.78□□□□□ -1.32
MSH3-203ENST00000512531 MAPKAPK5-AS1Q8N8E1 139 aa6.78□□□□□ -1.32
MSH3-203ENST00000512531 KIR2DL5BQ8NHK3 375 aa6.78□□□□□ -1.32
MSH3-203ENST00000512531 RAB37Q96AX2 223 aa6.78□□□□□ -1.32
MSH3-203ENST00000512531 TP73-AS1Q9UF72 201 aa6.78□□□□□ -1.32
MSH3-203ENST00000512531 UBE2D4Q9Y2X8 147 aa6.78□□□□□ -1.32
MSH3-203ENST00000512531 SPCS1Q9Y6A9 102 aa6.78□□□□□ -1.32
MSH3-203ENST00000512531 HUWE1Q7Z6Z7 4374 aaKnown RBP6.78□□□□□ -1.32
MSH3-203ENST00000512531 DNAH1Q9P2D7 4330 aa6.77□□□□□ -1.33
MSH3-203ENST00000512531 PCP4P48539 62 aa6.77□□□□□ -1.33
MSH3-203ENST00000512531 FXYD2P54710 66 aa6.77□□□□□ -1.33
MSH3-203ENST00000512531 C12orf74Q32Q52 190 aa6.77□□□□□ -1.33
MSH3-203ENST00000512531 Q8N3U1 123 aa6.77□□□□□ -1.33
MSH3-203ENST00000512531 PHLDA1Q8WV24 401 aaPredicted RBP6.77□□□□□ -1.33
MSH3-203ENST00000512531 ZNF479Q96JC4 524 aa6.77□□□□□ -1.33
MSH3-203ENST00000512531 TMEM243Q9BU79 118 aa6.77□□□□□ -1.33
MSH3-203ENST00000512531 CHCHD7Q9BUK0 85 aa6.77□□□□□ -1.33
MSH3-203ENST00000512531 IGHV1-58A0A0C4DH39 117 aa6.76□□□□□ -1.33
MSH3-203ENST00000512531 GAGE12BA1L429 117 aa6.76□□□□□ -1.33
MSH3-203ENST00000512531 K7ERU9 68 aa6.76□□□□□ -1.33
MSH3-203ENST00000512531 CCL25O15444 150 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms