RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 GAS8-AS1O95177 125 aa9.25□□□□□ -0.93
CCHCR1-229ENST00000512418 AKAP14Q86UN6 197 aa9.25□□□□□ -0.93
CCHCR1-229ENST00000512418 TSKUQ8WUA8 353 aa9.25□□□□□ -0.93
CCHCR1-229ENST00000512418 TMEM191AQ9H0A3 160 aa9.25□□□□□ -0.93
CCHCR1-229ENST00000512418 TMEM242Q9NWH2 141 aa9.25□□□□□ -0.93
CCHCR1-229ENST00000512418 A0A096LNI7 61 aa9.24□□□□□ -0.93
CCHCR1-229ENST00000512418 MRPL52Q86TS9 123 aaKnown RBP9.24□□□□□ -0.93
CCHCR1-229ENST00000512418 LINC01551Q86U37 167 aa9.24□□□□□ -0.93
CCHCR1-229ENST00000512418 SMIM7Q9BQ49 75 aa9.24□□□□□ -0.93
CCHCR1-229ENST00000512418 LINC00474Q9P2X8 69 aa9.24□□□□□ -0.93
CCHCR1-229ENST00000512418 TRBV27A0A0K0K1C4 114 aa9.23□□□□□ -0.93
CCHCR1-229ENST00000512418 C7orf77A4D0Y5 90 aa9.23□□□□□ -0.93
CCHCR1-229ENST00000512418 POLR2KP53803 58 aaKnown RBP9.23□□□□□ -0.93
CCHCR1-229ENST00000512418 PRR3P79522 188 aaKnown RBP9.23□□□□□ -0.93
CCHCR1-229ENST00000512418 SS18Q15532 418 aa9.23□□□□□ -0.93
CCHCR1-229ENST00000512418 CARD19Q96LW7 228 aa9.23□□□□□ -0.93
CCHCR1-229ENST00000512418 EIF5A2Q9GZV4 153 aaKnown RBP9.23□□□□□ -0.93
CCHCR1-229ENST00000512418 CDC42SE2Q9NRR3 84 aa9.23□□□□□ -0.93
CCHCR1-229ENST00000512418 RAB4AP20338 218 aa9.22□□□□□ -0.93
CCHCR1-229ENST00000512418 CD164L2Q6UWJ8 174 aa9.22□□□□□ -0.93
CCHCR1-229ENST00000512418 OSTCQ9NRP0 149 aa9.22□□□□□ -0.93
CCHCR1-229ENST00000512418 TNXBP22105 4242 aa9.22□□□□□ -0.93
CCHCR1-229ENST00000512418 ZNF727A8MUV8 499 aa9.21□□□□□ -0.94
CCHCR1-229ENST00000512418 AMN1Q8IY45 258 aa9.21□□□□□ -0.94
CCHCR1-229ENST00000512418 ZNF664Q8N3J9 261 aa9.21□□□□□ -0.94
CCHCR1-229ENST00000512418 LINC00526Q96FQ7 95 aa9.21□□□□□ -0.94
CCHCR1-229ENST00000512418 ZNF561-AS1K7EIQ3 104 aa9.2□□□□□ -0.94
CCHCR1-229ENST00000512418 VCYO14598 125 aa9.19□□□□□ -0.94
CCHCR1-229ENST00000512418 PPP1R17O96001 155 aa9.19□□□□□ -0.94
CCHCR1-229ENST00000512418 FCER1GP30273 86 aa9.19□□□□□ -0.94
CCHCR1-229ENST00000512418 SYCNQ0VAF6 134 aa9.19□□□□□ -0.94
CCHCR1-229ENST00000512418 LINC01600Q96MT4 127 aa9.19□□□□□ -0.94
CCHCR1-229ENST00000512418 C1orf196B1AJZ1 125 aa9.18□□□□□ -0.94
CCHCR1-229ENST00000512418 CAMPP49913 170 aa9.18□□□□□ -0.94
CCHCR1-229ENST00000512418 SMAGPQ0VAQ4 97 aa9.18□□□□□ -0.94
CCHCR1-229ENST00000512418 RIGQ13278 110 aa9.18□□□□□ -0.94
CCHCR1-229ENST00000512418 ISOC2Q96AB3 205 aa9.18□□□□□ -0.94
CCHCR1-229ENST00000512418 CSDC2Q9Y534 153 aaKnown RBP9.18□□□□□ -0.94
CCHCR1-229ENST00000512418 V9GYV3 84 aa9.18□□□□□ -0.94
CCHCR1-229ENST00000512418 hCG_2014768A0A024R1R8 64 aa9.17□□□□□ -0.94
CCHCR1-229ENST00000512418 SMKR1H3BMG3 65 aa9.17□□□□□ -0.94
CCHCR1-229ENST00000512418 SRP19P09132 144 aaKnown RBP9.17□□□□□ -0.94
CCHCR1-229ENST00000512418 SUMO2P61956 95 aaKnown RBP9.17□□□□□ -0.94
CCHCR1-229ENST00000512418 NRACQ8N912 160 aa9.17□□□□□ -0.94
CCHCR1-229ENST00000512418 NUP35Q8NFH5 326 aa9.17□□□□□ -0.94
CCHCR1-229ENST00000512418 KIR2DL4Q99706 377 aa9.17□□□□□ -0.94
CCHCR1-229ENST00000512418 UBE2D4Q9Y2X8 147 aa9.17□□□□□ -0.94
CCHCR1-229ENST00000512418 COX7A2LO14548 114 aa9.16□□□□□ -0.94
CCHCR1-229ENST00000512418 MALP21145 153 aa9.16□□□□□ -0.94
CCHCR1-229ENST00000512418 SPINK6Q6UWN8 80 aa9.16□□□□□ -0.94
CCHCR1-229ENST00000512418 NAT8BQ9UHF3 227 aa9.16□□□□□ -0.94
CCHCR1-229ENST00000512418 IGLV4-69A0A075B6H9 119 aa9.15□□□□□ -0.94
CCHCR1-229ENST00000512418 PPP1R2P9O14990 202 aa9.15□□□□□ -0.94
CCHCR1-229ENST00000512418 PTTG1IPP53801 180 aa9.15□□□□□ -0.94
CCHCR1-229ENST00000512418 Q6ZRP5 223 aa9.15□□□□□ -0.94
CCHCR1-229ENST00000512418 A0A0J9YXV3 536 aa9.14□□□□□ -0.95
CCHCR1-229ENST00000512418 LOC107984640A0A0U1RRK4 108 aa9.14□□□□□ -0.95
CCHCR1-229ENST00000512418 FAM74A3Q4VXF1 159 aa9.14□□□□□ -0.95
CCHCR1-229ENST00000512418 REG3GQ6UW15 175 aa9.14□□□□□ -0.95
CCHCR1-229ENST00000512418 LRP2P98164 4655 aa9.13□□□□□ -0.95
CCHCR1-229ENST00000512418 TRAV13-1A0A0B4J241 112 aa9.13□□□□□ -0.95
CCHCR1-229ENST00000512418 RPL23P62829 140 aaKnown RBP9.13□□□□□ -0.95
CCHCR1-229ENST00000512418 GAGE2BQ13066 116 aa9.13□□□□□ -0.95
CCHCR1-229ENST00000512418 TMEM241Q24JQ0 296 aa9.13□□□□□ -0.95
CCHCR1-229ENST00000512418 RNASE13Q5GAN3 156 aaKnown RBP9.13□□□□□ -0.95
CCHCR1-229ENST00000512418 FAM104BQ5XKR9 115 aa9.13□□□□□ -0.95
CCHCR1-229ENST00000512418 Q6ZUT4 128 aa9.13□□□□□ -0.95
CCHCR1-229ENST00000512418 TMEM18Q96B42 140 aa9.13□□□□□ -0.95
CCHCR1-229ENST00000512418 CAMK2N2Q96S95 79 aa9.13□□□□□ -0.95
CCHCR1-229ENST00000512418 TIMM21Q9BVV7 248 aa9.13□□□□□ -0.95
CCHCR1-229ENST00000512418 LINC00862A6NCI5 91 aa9.12□□□□□ -0.95
CCHCR1-229ENST00000512418 APOMO95445 188 aa9.12□□□□□ -0.95
CCHCR1-229ENST00000512418 MRPL51Q4U2R6 128 aaKnown RBP9.12□□□□□ -0.95
CCHCR1-229ENST00000512418 C2orf48Q96LS8 159 aa9.12□□□□□ -0.95
CCHCR1-229ENST00000512418 C20orf78Q9BR46 151 aa9.12□□□□□ -0.95
CCHCR1-229ENST00000512418 A0A1B0GW15 77 aa9.11□□□□□ -0.95
CCHCR1-229ENST00000512418 TCAPO15273 167 aa9.11□□□□□ -0.95
CCHCR1-229ENST00000512418 SRSF9Q13242 221 aaKnown RBP eCLIP9.11□□□□□ -0.95
CCHCR1-229ENST00000512418 ADIRFQ15847 76 aa9.11□□□□□ -0.95
CCHCR1-229ENST00000512418 C5orf38Q86SI9 138 aa9.11□□□□□ -0.95
CCHCR1-229ENST00000512418 NAT8Q9UHE5 227 aa9.11□□□□□ -0.95
CCHCR1-229ENST00000512418 TRBV24-1A0A075B6N3 115 aa9.1□□□□□ -0.95
CCHCR1-229ENST00000512418 SMIM27A0A1W2PRY6 76 aa9.1□□□□□ -0.95
CCHCR1-229ENST00000512418 RPL32P62910 135 aaKnown RBP9.1□□□□□ -0.95
CCHCR1-229ENST00000512418 SPAG11BQ08648 103 aa9.1□□□□□ -0.95
CCHCR1-229ENST00000512418 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.09□□□□□ -0.95
CCHCR1-229ENST00000512418 CKS2P33552 79 aa9.09□□□□□ -0.95
CCHCR1-229ENST00000512418 KRTAP10-8P60410 259 aa9.09□□□□□ -0.95
CCHCR1-229ENST00000512418 A0A1W2PNN7 141 aa9.08□□□□□ -0.96
CCHCR1-229ENST00000512418 RPL18AQ02543 176 aaKnown RBP9.08□□□□□ -0.96
CCHCR1-229ENST00000512418 OR10D4PQ8NGN7 298 aa9.08□□□□□ -0.96
CCHCR1-229ENST00000512418 C9JQL5 133 aa9.07□□□□□ -0.96
CCHCR1-229ENST00000512418 TNFRSF6BO95407 300 aa9.07□□□□□ -0.96
CCHCR1-229ENST00000512418 RPL39P62891 51 aaKnown RBP9.07□□□□□ -0.96
CCHCR1-229ENST00000512418 ODF1Q14990 250 aa9.07□□□□□ -0.96
CCHCR1-229ENST00000512418 RNF151Q2KHN1 245 aa9.07□□□□□ -0.96
CCHCR1-229ENST00000512418 C9orf116Q5BN46 136 aaPredicted RBP9.07□□□□□ -0.96
CCHCR1-229ENST00000512418 SMIM2Q9BVW6 85 aa9.07□□□□□ -0.96
CCHCR1-229ENST00000512418 SPANXA1Q9NS26 97 aa9.07□□□□□ -0.96
CCHCR1-229ENST00000512418 RNF213Q63HN8 5207 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms