RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 RPL36ALQ969Q0 106 aaKnown RBP7.25□□□□□ -1.25
RNF4-216ENST00000511859 AP5S1Q9NUS5 200 aa7.25□□□□□ -1.25
RNF4-216ENST00000511859 PRR34Q9NV39 138 aa7.25□□□□□ -1.25
RNF4-216ENST00000511859 TRAV26-2A0A0B4J265 109 aa7.24□□□□□ -1.25
RNF4-216ENST00000511859 hDV102S1A0JD36 115 aa7.24□□□□□ -1.25
RNF4-216ENST00000511859 UBE2D3P61077 147 aa7.24□□□□□ -1.25
RNF4-216ENST00000511859 UBE2D2P62837 147 aa7.24□□□□□ -1.25
RNF4-216ENST00000511859 S100PP25815 95 aa7.23□□□□□ -1.25
RNF4-216ENST00000511859 RAB4BP61018 213 aa7.23□□□□□ -1.25
RNF4-216ENST00000511859 HBBP68871 147 aa7.23□□□□□ -1.25
RNF4-216ENST00000511859 SUMO4Q6EEV6 95 aa7.23□□□□□ -1.25
RNF4-216ENST00000511859 A0A1B0GXF2 115 aa7.22□□□□□ -1.25
RNF4-216ENST00000511859 CBLN2Q8IUK8 224 aa7.22□□□□□ -1.25
RNF4-216ENST00000511859 AMN1Q8IY45 258 aa7.22□□□□□ -1.25
RNF4-216ENST00000511859 BTF3L4Q96K17 158 aa7.22□□□□□ -1.25
RNF4-216ENST00000511859 IMMP2LQ96T52 175 aa7.22□□□□□ -1.25
RNF4-216ENST00000511859 TMEM191AQ9H0A3 160 aa7.22□□□□□ -1.25
RNF4-216ENST00000511859 TMEM242Q9NWH2 141 aa7.22□□□□□ -1.25
RNF4-216ENST00000511859 TGIF2-C20orf24A0A0A6YYL0 155 aa7.21□□□□□ -1.25
RNF4-216ENST00000511859 SMKR1H3BMG3 65 aa7.21□□□□□ -1.25
RNF4-216ENST00000511859 ATP6V1G1O75348 118 aa7.21□□□□□ -1.25
RNF4-216ENST00000511859 SLPIP03973 132 aa7.21□□□□□ -1.25
RNF4-216ENST00000511859 SRSF9Q13242 221 aaKnown RBP eCLIP7.21□□□□□ -1.25
RNF4-216ENST00000511859 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.21□□□□□ -1.25
RNF4-216ENST00000511859 CHCHD5Q9BSY4 110 aa7.21□□□□□ -1.25
RNF4-216ENST00000511859 TMA7Q9Y2S6 64 aaKnown RBP7.21□□□□□ -1.25
RNF4-216ENST00000511859 NCR2O95944 276 aa7.2□□□□□ -1.26
RNF4-216ENST00000511859 RAB4AP20338 218 aa7.2□□□□□ -1.26
RNF4-216ENST00000511859 ATP5L2Q7Z4Y8 100 aa7.2□□□□□ -1.26
RNF4-216ENST00000511859 LINC00269Q8N2A0 174 aa7.2□□□□□ -1.26
RNF4-216ENST00000511859 GATD1Q8NB37 220 aa7.2□□□□□ -1.26
RNF4-216ENST00000511859 NEXN-AS1Q8NBZ9 246 aa7.2□□□□□ -1.26
RNF4-216ENST00000511859 TRAV8-4A0A0B4J246 113 aa7.2□□□□□ -1.26
RNF4-216ENST00000511859 A0A1B0GW15 77 aa7.2□□□□□ -1.26
RNF4-216ENST00000511859 M0QY20 66 aa7.2□□□□□ -1.26
RNF4-216ENST00000511859 SCO1O75880 301 aa7.2□□□□□ -1.26
RNF4-216ENST00000511859 S100A8P05109 93 aa7.2□□□□□ -1.26
RNF4-216ENST00000511859 MAJINQ3KP22 176 aa7.2□□□□□ -1.26
RNF4-216ENST00000511859 MRPL51Q4U2R6 128 aaKnown RBP7.2□□□□□ -1.26
RNF4-216ENST00000511859 TMEM97Q5BJF2 176 aa7.2□□□□□ -1.26
RNF4-216ENST00000511859 FAM104BQ5XKR9 115 aa7.2□□□□□ -1.26
RNF4-216ENST00000511859 RPL39LQ96EH5 51 aaKnown RBP7.2□□□□□ -1.26
RNF4-216ENST00000511859 RBX1P62877 108 aa7.19□□□□□ -1.26
RNF4-216ENST00000511859 COX6A2Q02221 97 aa7.19□□□□□ -1.26
RNF4-216ENST00000511859 RASL11AQ6T310 242 aa7.19□□□□□ -1.26
RNF4-216ENST00000511859 CLPSL2Q6UWE3 100 aa7.19□□□□□ -1.26
RNF4-216ENST00000511859 STPG4Q8N801 248 aa7.19□□□□□ -1.26
RNF4-216ENST00000511859 TRAV9-1A0A075B6T8 112 aa7.18□□□□□ -1.26
RNF4-216ENST00000511859 H7C1H1 209 aa7.18□□□□□ -1.26
RNF4-216ENST00000511859 RPS10P46783 165 aaKnown RBP7.18□□□□□ -1.26
RNF4-216ENST00000511859 REG3AQ06141 175 aa7.18□□□□□ -1.26
RNF4-216ENST00000511859 TMEM136Q6ZRR5 245 aa7.18□□□□□ -1.26
RNF4-216ENST00000511859 SMCO4Q9NRQ5 59 aa7.18□□□□□ -1.26
RNF4-216ENST00000511859 IGLV10-54A0A075B6I4 117 aa7.17□□□□□ -1.26
RNF4-216ENST00000511859 KIAA1644Q3SXP7 199 aa7.17□□□□□ -1.26
RNF4-216ENST00000511859 Q6ZRP5 223 aa7.17□□□□□ -1.26
RNF4-216ENST00000511859 NIT2Q9NQR4 276 aa7.17□□□□□ -1.26
RNF4-216ENST00000511859 D6R8Y8 96 aa7.16□□□□□ -1.26
RNF4-216ENST00000511859 LORP23490 312 aaPredicted RBP7.16□□□□□ -1.26
RNF4-216ENST00000511859 CKS2P33552 79 aa7.16□□□□□ -1.26
RNF4-216ENST00000511859 MRAP2Q96G30 205 aa7.16□□□□□ -1.26
RNF4-216ENST00000511859 YPEL4Q96NS1 127 aa7.16□□□□□ -1.26
RNF4-216ENST00000511859 IGKV2-24A0A0C4DH68 120 aa7.15□□□□□ -1.26
RNF4-216ENST00000511859 S100A1P23297 94 aa7.15□□□□□ -1.26
RNF4-216ENST00000511859 CFAP161Q6P656 301 aa7.15□□□□□ -1.26
RNF4-216ENST00000511859 NTM-AS1Q6ZSK4 140 aa7.15□□□□□ -1.26
RNF4-216ENST00000511859 ZNF664Q8N3J9 261 aa7.15□□□□□ -1.26
RNF4-216ENST00000511859 PRSS3P2Q8NHM4 247 aa7.15□□□□□ -1.26
RNF4-216ENST00000511859 LINC00474Q9P2X8 69 aa7.15□□□□□ -1.26
RNF4-216ENST00000511859 TRBV24-1A0A075B6N3 115 aa7.14□□□□□ -1.27
RNF4-216ENST00000511859 TRBV25-1A0A075B6N4 114 aa7.14□□□□□ -1.27
RNF4-216ENST00000511859 NPYP01303 97 aa7.14□□□□□ -1.27
RNF4-216ENST00000511859 APCSP02743 223 aa7.14□□□□□ -1.27
RNF4-216ENST00000511859 GAGE6Q13070 117 aa7.14□□□□□ -1.27
RNF4-216ENST00000511859 NRACQ8N912 160 aa7.14□□□□□ -1.27
RNF4-216ENST00000511859 PRELID3AQ96N28 172 aa7.14□□□□□ -1.27
RNF4-216ENST00000511859 GNB1LQ9BYB4 327 aa7.14□□□□□ -1.27
RNF4-216ENST00000511859 MRPL18Q9H0U6 180 aaKnown RBP7.14□□□□□ -1.27
RNF4-216ENST00000511859 ST20Q9HBF5 79 aa7.14□□□□□ -1.27
RNF4-216ENST00000511859 PSORS1C2Q9UIG4 136 aa7.14□□□□□ -1.27
RNF4-216ENST00000511859 SDHAF1A6NFY7 115 aa7.13□□□□□ -1.27
RNF4-216ENST00000511859 TNFRSF6BO95407 300 aa7.13□□□□□ -1.27
RNF4-216ENST00000511859 FABP9Q0Z7S8 132 aa7.13□□□□□ -1.27
RNF4-216ENST00000511859 ORMDL3Q8N138 153 aa7.13□□□□□ -1.27
RNF4-216ENST00000511859 TRAPPC1Q9Y5R8 145 aa7.13□□□□□ -1.27
RNF4-216ENST00000511859 A0A1B0GUV1 79 aa7.12□□□□□ -1.27
RNF4-216ENST00000511859 PMCHP20382 165 aa7.12□□□□□ -1.27
RNF4-216ENST00000511859 TRBV6-5A0A0K0K1A5 114 aa7.11□□□□□ -1.27
RNF4-216ENST00000511859 LOC389332A0A1B0GUA5 103 aa7.11□□□□□ -1.27
RNF4-216ENST00000511859 PPBPP02775 128 aa7.11□□□□□ -1.27
RNF4-216ENST00000511859 MT-ND6P03923 174 aa7.11□□□□□ -1.27
RNF4-216ENST00000511859 IQCJQ1A5X6 159 aa7.11□□□□□ -1.27
RNF4-216ENST00000511859 COX19Q49B96 90 aa7.11□□□□□ -1.27
RNF4-216ENST00000511859 C20orf203Q8NBC4 194 aa7.11□□□□□ -1.27
RNF4-216ENST00000511859 PKIGQ9Y2B9 76 aa7.11□□□□□ -1.27
RNF4-216ENST00000511859 A0A096LNI7 61 aa7.1□□□□□ -1.27
RNF4-216ENST00000511859 IGHV1-24A0A0C4DH33 117 aa7.1□□□□□ -1.27
RNF4-216ENST00000511859 COLCA2A8K830 154 aa7.1□□□□□ -1.27
RNF4-216ENST00000511859 SUMO2P61956 95 aaKnown RBP7.1□□□□□ -1.27
RNF4-216ENST00000511859 COTL1Q14019 142 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms