RNA–Protein interactions for RNA: ENST00000511773.5

POLR2J3-216, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-216ENST00000511773 BCL2L11O43521 198 aa7.93□□□□□ -1.14
POLR2J3-216ENST00000511773 CTRLP40313 264 aa7.93□□□□□ -1.14
POLR2J3-216ENST00000511773 MBD3L1Q8WWY6 194 aa7.93□□□□□ -1.14
POLR2J3-216ENST00000511773 FAM168BA1KXE4 195 aa7.92□□□□□ -1.14
POLR2J3-216ENST00000511773 COX7A2LO14548 114 aa7.92□□□□□ -1.14
POLR2J3-216ENST00000511773 ARPC5O15511 151 aa7.92□□□□□ -1.14
POLR2J3-216ENST00000511773 TSPAN13O95857 204 aa7.92□□□□□ -1.14
POLR2J3-216ENST00000511773 PMCHP20382 165 aa7.92□□□□□ -1.14
POLR2J3-216ENST00000511773 RAB19A4D1S5 217 aa7.91□□□□□ -1.14
POLR2J3-216ENST00000511773 I3L3M4 83 aa7.91□□□□□ -1.14
POLR2J3-216ENST00000511773 RPL13AP40429 203 aaKnown RBP7.91□□□□□ -1.14
POLR2J3-216ENST00000511773 GNG4P50150 75 aa7.91□□□□□ -1.14
POLR2J3-216ENST00000511773 FOXA3P55318 350 aaPredicted RBP7.91□□□□□ -1.14
POLR2J3-216ENST00000511773 FAM19A5Q7Z5A7 132 aaPredicted RBP7.91□□□□□ -1.14
POLR2J3-216ENST00000511773 C9orf62Q8N4C0 152 aa7.91□□□□□ -1.14
POLR2J3-216ENST00000511773 MRAP2Q96G30 205 aa7.91□□□□□ -1.14
POLR2J3-216ENST00000511773 CDC42SE2Q9NRR3 84 aa7.91□□□□□ -1.14
POLR2J3-216ENST00000511773 TMEM242Q9NWH2 141 aa7.91□□□□□ -1.14
POLR2J3-216ENST00000511773 GNG13Q9P2W3 67 aa7.91□□□□□ -1.14
POLR2J3-216ENST00000511773 H2AFB1P0C5Y9 115 aa7.9□□□□□ -1.14
POLR2J3-216ENST00000511773 C11orf52Q96A22 123 aa7.9□□□□□ -1.14
POLR2J3-216ENST00000511773 TSHBP01222 138 aa7.89□□□□□ -1.15
POLR2J3-216ENST00000511773 ESDP10768 282 aa7.89□□□□□ -1.15
POLR2J3-216ENST00000511773 SPAG11BQ08648 103 aa7.89□□□□□ -1.15
POLR2J3-216ENST00000511773 UMAD1C9J7I0 102 aa7.88□□□□□ -1.15
POLR2J3-216ENST00000511773 G3V3Q6 166 aa7.88□□□□□ -1.15
POLR2J3-216ENST00000511773 RNASE13Q5GAN3 156 aaKnown RBP7.88□□□□□ -1.15
POLR2J3-216ENST00000511773 SMIM15Q7Z3B0 74 aa7.88□□□□□ -1.15
POLR2J3-216ENST00000511773 C5orf38Q86SI9 138 aa7.88□□□□□ -1.15
POLR2J3-216ENST00000511773 TSKUQ8WUA8 353 aa7.88□□□□□ -1.15
POLR2J3-216ENST00000511773 C2orf48Q96LS8 159 aa7.88□□□□□ -1.15
POLR2J3-216ENST00000511773 CNFNQ9BYD5 112 aa7.88□□□□□ -1.15
POLR2J3-216ENST00000511773 C1orf196B1AJZ1 125 aa7.87□□□□□ -1.15
POLR2J3-216ENST00000511773 CCL20P78556 96 aa7.87□□□□□ -1.15
POLR2J3-216ENST00000511773 TEX261Q6UWH6 196 aa7.87□□□□□ -1.15
POLR2J3-216ENST00000511773 MRPL52Q86TS9 123 aaKnown RBP7.87□□□□□ -1.15
POLR2J3-216ENST00000511773 RNASE7Q9H1E1 156 aaKnown RBP7.87□□□□□ -1.15
POLR2J3-216ENST00000511773 MANBALQ9NQG1 85 aa7.87□□□□□ -1.15
POLR2J3-216ENST00000511773 TRBV20OR9-2A0A075B6H5 130 aa7.86□□□□□ -1.15
POLR2J3-216ENST00000511773 TRAV13-1A0A0B4J241 112 aa7.86□□□□□ -1.15
POLR2J3-216ENST00000511773 UBE2BP63146 152 aa7.86□□□□□ -1.15
POLR2J3-216ENST00000511773 NUDT10Q8NFP7 164 aa7.86□□□□□ -1.15
POLR2J3-216ENST00000511773 SMIM12Q96EX1 92 aa7.86□□□□□ -1.15
POLR2J3-216ENST00000511773 NUDT11Q96G61 164 aa7.86□□□□□ -1.15
POLR2J3-216ENST00000511773 ST20Q9HBF5 79 aa7.86□□□□□ -1.15
POLR2J3-216ENST00000511773 C7orf77A4D0Y5 90 aa7.85□□□□□ -1.15
POLR2J3-216ENST00000511773 RNF151Q2KHN1 245 aa7.85□□□□□ -1.15
POLR2J3-216ENST00000511773 RPP21Q9H633 154 aaKnown RBP7.85□□□□□ -1.15
POLR2J3-216ENST00000511773 BIN3Q9NQY0 253 aa7.85□□□□□ -1.15
POLR2J3-216ENST00000511773 FSIP2Q5CZC0 6907 aa7.84□□□□□ -1.15
POLR2J3-216ENST00000511773 TRBV6-5A0A0K0K1A5 114 aa7.84□□□□□ -1.15
POLR2J3-216ENST00000511773 SMLR1H3BR10 107 aa7.84□□□□□ -1.15
POLR2J3-216ENST00000511773 M0QXV9 152 aa7.84□□□□□ -1.15
POLR2J3-216ENST00000511773 GAGE2EQ4V326 116 aa7.84□□□□□ -1.15
POLR2J3-216ENST00000511773 MED9Q9NWA0 146 aa7.84□□□□□ -1.15
POLR2J3-216ENST00000511773 GAGE2DQ9UEU5 116 aa7.84□□□□□ -1.15
POLR2J3-216ENST00000511773 ORAOV1Q8WV07 137 aa7.83□□□□□ -1.16
POLR2J3-216ENST00000511773 IMMP2LQ96T52 175 aa7.83□□□□□ -1.16
POLR2J3-216ENST00000511773 MRPL35Q9NZE8 188 aaKnown RBP7.83□□□□□ -1.16
POLR2J3-216ENST00000511773 CARHSP1Q9Y2V2 147 aaKnown RBP7.83□□□□□ -1.16
POLR2J3-216ENST00000511773 C10orf25Q5T742 122 aa7.82□□□□□ -1.16
POLR2J3-216ENST00000511773 KRTAP7-1Q8IUC3 87 aa7.82□□□□□ -1.16
POLR2J3-216ENST00000511773 NDUFA1O15239 70 aa7.81□□□□□ -1.16
POLR2J3-216ENST00000511773 Q6ZUT4 128 aa7.81□□□□□ -1.16
POLR2J3-216ENST00000511773 OR10D4PQ8NGN7 298 aa7.81□□□□□ -1.16
POLR2J3-216ENST00000511773 MUC17Q685J3 4493 aa7.8□□□□□ -1.16
POLR2J3-216ENST00000511773 TRBV27A0A0K0K1C4 114 aa7.8□□□□□ -1.16
POLR2J3-216ENST00000511773 K7EN84 100 aa7.8□□□□□ -1.16
POLR2J3-216ENST00000511773 PDE6DO43924 150 aa7.8□□□□□ -1.16
POLR2J3-216ENST00000511773 FCER1GP30273 86 aa7.8□□□□□ -1.16
POLR2J3-216ENST00000511773 UNQ6190/PRO20217Q6UXQ8 127 aa7.8□□□□□ -1.16
POLR2J3-216ENST00000511773 RETNLBQ9BQ08 111 aa7.8□□□□□ -1.16
POLR2J3-216ENST00000511773 C6orf48Q9UBA6 75 aa7.8□□□□□ -1.16
POLR2J3-216ENST00000511773 UBE2D4Q9Y2X8 147 aa7.8□□□□□ -1.16
POLR2J3-216ENST00000511773 POLR2KP53803 58 aaKnown RBP7.79□□□□□ -1.16
POLR2J3-216ENST00000511773 ZNF345Q14585 488 aa7.79□□□□□ -1.16
POLR2J3-216ENST00000511773 SMDT1Q9H4I9 107 aa7.79□□□□□ -1.16
POLR2J3-216ENST00000511773 A0A087X002 238 aa7.78□□□□□ -1.16
POLR2J3-216ENST00000511773 KANTRA0A1W2PQU2 76 aa7.78□□□□□ -1.16
POLR2J3-216ENST00000511773 TLX1NBP0CAT3 122 aa7.78□□□□□ -1.16
POLR2J3-216ENST00000511773 FAM210AQ96ND0 272 aa7.78□□□□□ -1.16
POLR2J3-216ENST00000511773 CSDC2Q9Y534 153 aaKnown RBP7.78□□□□□ -1.16
POLR2J3-216ENST00000511773 ZNF861PO60384 105 aa7.77□□□□□ -1.17
POLR2J3-216ENST00000511773 SMAGPQ0VAQ4 97 aa7.77□□□□□ -1.17
POLR2J3-216ENST00000511773 OCC1Q8TAD7 63 aa7.77□□□□□ -1.17
POLR2J3-216ENST00000511773 CDIP1Q9H305 208 aa7.77□□□□□ -1.17
POLR2J3-216ENST00000511773 F8WDY8 70 aa7.76□□□□□ -1.17
POLR2J3-216ENST00000511773 SMKR1H3BMG3 65 aa7.76□□□□□ -1.17
POLR2J3-216ENST00000511773 TMEM241Q24JQ0 296 aa7.76□□□□□ -1.17
POLR2J3-216ENST00000511773 TYMSOSQ8TAI1 123 aa7.76□□□□□ -1.17
POLR2J3-216ENST00000511773 BORCS7Q96B45 105 aa7.76□□□□□ -1.17
POLR2J3-216ENST00000511773 TEX46H3BTG2 121 aa7.75□□□□□ -1.17
POLR2J3-216ENST00000511773 VCYO14598 125 aa7.75□□□□□ -1.17
POLR2J3-216ENST00000511773 GATCO43716 136 aaKnown RBP7.75□□□□□ -1.17
POLR2J3-216ENST00000511773 RAB4AP20338 218 aa7.74□□□□□ -1.17
POLR2J3-216ENST00000511773 C9orf129Q5T035 196 aaKnown RBP7.74□□□□□ -1.17
POLR2J3-216ENST00000511773 AMN1Q8IY45 258 aa7.74□□□□□ -1.17
POLR2J3-216ENST00000511773 KIR2DL4Q99706 377 aa7.74□□□□□ -1.17
POLR2J3-216ENST00000511773 IGHV3OR16-9A0A0B4J2B5 98 aa7.73□□□□□ -1.17
POLR2J3-216ENST00000511773 A8MWL6 223 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms