RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 MGPP08493 103 aa0.18□□□□□ -2.38
CHD1-207ENST00000511628 HAMPP81172 84 aa0.18□□□□□ -2.38
CHD1-207ENST00000511628 DPH3P1Q9H4G8 78 aa0.18□□□□□ -2.38
CHD1-207ENST00000511628 FAIMQ9NVQ4 179 aa0.18□□□□□ -2.38
CHD1-207ENST00000511628 PKDREJQ9NTG1 2253 aa0.18□□□□□ -2.38
CHD1-207ENST00000511628 OTOGQ6ZRI0 2925 aa0.18□□□□□ -2.38
CHD1-207ENST00000511628 LRRC37A2A6NM11 1700 aa0.18□□□□□ -2.38
CHD1-207ENST00000511628 ARAP2Q8WZ64 1704 aa0.18□□□□□ -2.38
CHD1-207ENST00000511628 MAPKBP1O60336 1514 aa0.18□□□□□ -2.38
CHD1-207ENST00000511628 FOCADQ5VW36 1801 aa0.17□□□□□ -2.38
CHD1-207ENST00000511628 WNK3Q9BYP7 1800 aa0.17□□□□□ -2.38
CHD1-207ENST00000511628 DMBT1Q9UGM3 2413 aaPredicted RBP0.17□□□□□ -2.38
CHD1-207ENST00000511628 DSTQ03001 7570 aaKnown RBP0.17□□□□□ -2.38
CHD1-207ENST00000511628 TRAV22A0A0B4J277 110 aa0.17□□□□□ -2.38
CHD1-207ENST00000511628 NAP1L6A6NFF2 107 aa0.17□□□□□ -2.38
CHD1-207ENST00000511628 HMGN4O00479 90 aa0.17□□□□□ -2.38
CHD1-207ENST00000511628 S100A1P23297 94 aa0.17□□□□□ -2.38
CHD1-207ENST00000511628 KRTDAPP60985 99 aa0.17□□□□□ -2.38
CHD1-207ENST00000511628 GNG11P61952 73 aa0.17□□□□□ -2.38
CHD1-207ENST00000511628 AKAP6Q13023 2319 aa0.17□□□□□ -2.38
CHD1-207ENST00000511628 IGSF10Q6WRI0 2623 aa0.17□□□□□ -2.38
CHD1-207ENST00000511628 GTF2H5Q6ZYL4 71 aa0.17□□□□□ -2.38
CHD1-207ENST00000511628 Q8IZM0 81 aa0.17□□□□□ -2.38
CHD1-207ENST00000511628 IFT172Q9UG01 1749 aa0.17□□□□□ -2.38
CHD1-207ENST00000511628 PRO0255Q9UI72 69 aa0.17□□□□□ -2.38
CHD1-207ENST00000511628 POLQO75417 2590 aa0.17□□□□□ -2.38
CHD1-207ENST00000511628 CELSR2Q9HCU4 2923 aa0.17□□□□□ -2.38
CHD1-207ENST00000511628 FAT4Q6V0I7 4981 aa0.16□□□□□ -2.38
CHD1-207ENST00000511628 NALCNQ8IZF0 1738 aa0.16□□□□□ -2.38
CHD1-207ENST00000511628 MYO7BQ6PIF6 2116 aa0.16□□□□□ -2.38
CHD1-207ENST00000511628 EIF4G3O43432 1585 aaKnown RBP0.16□□□□□ -2.38
CHD1-207ENST00000511628 PIEZO1Q92508 2521 aa0.16□□□□□ -2.38
CHD1-207ENST00000511628 NCOR2Q9Y618 2525 aa0.16□□□□□ -2.38
CHD1-207ENST00000511628 CHKB-CPT1BH3BT56 60 aa0.16□□□□□ -2.38
CHD1-207ENST00000511628 M0R3E3 92 aa0.16□□□□□ -2.38
CHD1-207ENST00000511628 COX6CP09669 75 aa0.16□□□□□ -2.38
CHD1-207ENST00000511628 PIGYQ3MUY2 71 aa0.16□□□□□ -2.38
CHD1-207ENST00000511628 Q6JHZ5 121 aa0.16□□□□□ -2.38
CHD1-207ENST00000511628 TMEM263Q8WUH6 116 aaKnown RBP0.16□□□□□ -2.38
CHD1-207ENST00000511628 FAM167A-AS1Q96KT0 104 aa0.16□□□□□ -2.38
CHD1-207ENST00000511628 NXT2Q9NPJ8 142 aaKnown RBP0.16□□□□□ -2.38
CHD1-207ENST00000511628 DOCK1Q14185 1865 aa0.16□□□□□ -2.38
CHD1-207ENST00000511628 MYOM2P54296 1465 aa0.16□□□□□ -2.38
CHD1-207ENST00000511628 PRDM2Q13029 1718 aa0.16□□□□□ -2.38
CHD1-207ENST00000511628 PTPRQQ9UMZ3 2332 aa0.15□□□□□ -2.38
CHD1-207ENST00000511628 TCHHQ07283 1943 aa0.15□□□□□ -2.39
CHD1-207ENST00000511628 C20orf202A1L168 122 aa0.15□□□□□ -2.39
CHD1-207ENST00000511628 C10orf142B7Z368 130 aa0.15□□□□□ -2.39
CHD1-207ENST00000511628 WFDC2Q14508 124 aa0.15□□□□□ -2.39
CHD1-207ENST00000511628 TSLPQ969D9 159 aa0.15□□□□□ -2.39
CHD1-207ENST00000511628 TP53AIP1Q9HCN2 124 aa0.15□□□□□ -2.39
CHD1-207ENST00000511628 CDC42SE2Q9NRR3 84 aa0.15□□□□□ -2.39
CHD1-207ENST00000511628 PHLPP1O60346 1717 aa0.15□□□□□ -2.39
CHD1-207ENST00000511628 PLXNB2O15031 1838 aa0.15□□□□□ -2.39
CHD1-207ENST00000511628 ERCC6L2Q5T890 1561 aa0.15□□□□□ -2.39
CHD1-207ENST00000511628 SYNE1Q8NF91 8797 aaKnown RBP0.15□□□□□ -2.39
CHD1-207ENST00000511628 KDM3BQ7LBC6 1761 aa0.14□□□□□ -2.39
CHD1-207ENST00000511628 C10orf71Q711Q0 1435 aa0.14□□□□□ -2.39
CHD1-207ENST00000511628 FAM135AQ9P2D6 1515 aa0.14□□□□□ -2.39
CHD1-207ENST00000511628 BCE1O60756 84 aa0.14□□□□□ -2.39
CHD1-207ENST00000511628 TRAPPC2P0DI81 140 aa0.14□□□□□ -2.39
CHD1-207ENST00000511628 TRAPPC2BP0DI82 140 aa0.14□□□□□ -2.39
CHD1-207ENST00000511628 S100PP25815 95 aa0.14□□□□□ -2.39
CHD1-207ENST00000511628 Q5VSD8 79 aa0.14□□□□□ -2.39
CHD1-207ENST00000511628 C12orf57Q99622 126 aa0.14□□□□□ -2.39
CHD1-207ENST00000511628 LINC00472Q9H8W2 130 aa0.14□□□□□ -2.39
CHD1-207ENST00000511628 PRO1854Q9UHT4 67 aa0.14□□□□□ -2.39
CHD1-207ENST00000511628 USF3Q68DE3 2245 aa0.14□□□□□ -2.39
CHD1-207ENST00000511628 UNC79Q9P2D8 2635 aa0.14□□□□□ -2.39
CHD1-207ENST00000511628 SPTBN1Q01082 2364 aaKnown RBP0.13□□□□□ -2.39
CHD1-207ENST00000511628 NEBP20929 6669 aa0.13□□□□□ -2.39
CHD1-207ENST00000511628 SBF2Q86WG5 1849 aa0.13□□□□□ -2.39
CHD1-207ENST00000511628 ABCA2Q9BZC7 2435 aa0.13□□□□□ -2.39
CHD1-207ENST00000511628 LINC00587B1AMM8 73 aa0.13□□□□□ -2.39
CHD1-207ENST00000511628 TMEM262E9PQX1 116 aa0.13□□□□□ -2.39
CHD1-207ENST00000511628 IGLC1P0CG04 106 aa0.13□□□□□ -2.39
CHD1-207ENST00000511628 UBA52P62987 128 aaKnown RBP0.13□□□□□ -2.39
CHD1-207ENST00000511628 TCEAL7Q9BRU2 100 aa0.13□□□□□ -2.39
CHD1-207ENST00000511628 PRO1933Q9H354 126 aa0.13□□□□□ -2.39
CHD1-207ENST00000511628 MANBALQ9NQG1 85 aa0.13□□□□□ -2.39
CHD1-207ENST00000511628 LINC00474Q9P2X8 69 aa0.13□□□□□ -2.39
CHD1-207ENST00000511628 ARL2-SNX15V9GYD0 113 aa0.13□□□□□ -2.39
CHD1-207ENST00000511628 PSME4Q14997 1843 aa0.13□□□□□ -2.39
CHD1-207ENST00000511628 NHSL1Q5SYE7 1610 aa0.13□□□□□ -2.39
CHD1-207ENST00000511628 RAPGEF6Q8TEU7 1601 aa0.13□□□□□ -2.39
CHD1-207ENST00000511628 SCAPERQ9BY12 1400 aa0.13□□□□□ -2.39
CHD1-207ENST00000511628 TRBV6-1A0A0K0K1D8 114 aa0.12□□□□□ -2.39
CHD1-207ENST00000511628 A0A1B0GWA3 101 aa0.12□□□□□ -2.39
CHD1-207ENST00000511628 SAA2P0DJI9 122 aaPredicted RBP0.12□□□□□ -2.39
CHD1-207ENST00000511628 HSD52Q0P140 79 aa0.12□□□□□ -2.39
CHD1-207ENST00000511628 Q0VG73 95 aa0.12□□□□□ -2.39
CHD1-207ENST00000511628 SPRR4Q96PI1 79 aa0.12□□□□□ -2.39
CHD1-207ENST00000511628 CGREF1Q99674 301 aa0.12□□□□□ -2.39
CHD1-207ENST00000511628 PTPN13Q12923 2485 aa0.12□□□□□ -2.39
CHD1-207ENST00000511628 BIVM-ERCC5R4GMW8 1640 aa0.12□□□□□ -2.39
CHD1-207ENST00000511628 HIVEP3Q5T1R4 2406 aa0.12□□□□□ -2.39
CHD1-207ENST00000511628 CHD9Q3L8U1 2897 aa0.12□□□□□ -2.39
CHD1-207ENST00000511628 UBR5O95071 2799 aaPredicted RBP0.11□□□□□ -2.39
CHD1-207ENST00000511628 KIF21AQ7Z4S6 1674 aa0.11□□□□□ -2.39
CHD1-207ENST00000511628 RIMS1Q86UR5 1692 aaKnown RBP0.11□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms