RNA–Protein interactions for RNA: ENST00000510058.1

CCND3-212, Transcript of cyclin D3, humanhuman

TSL 2

Gene CCND3, Length 926 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-212ENST00000510058 RTL8CO15255 209 aa13.09□□□□□ -0.31
CCND3-212ENST00000510058 ENHOQ6UWT2 76 aa13.09□□□□□ -0.31
CCND3-212ENST00000510058 C2orf66Q6UXQ4 117 aa13.09□□□□□ -0.31
CCND3-212ENST00000510058 CDC42SE2Q9NRR3 84 aa13.09□□□□□ -0.31
CCND3-212ENST00000510058 PYGO1Q9Y3Y4 419 aa13.09□□□□□ -0.31
CCND3-212ENST00000510058 NPSP0C0P6 89 aa13.08□□□□□ -0.32
CCND3-212ENST00000510058 LINC00614P0C842 121 aa13.08□□□□□ -0.32
CCND3-212ENST00000510058 RPL39P62891 51 aaKnown RBP13.08□□□□□ -0.32
CCND3-212ENST00000510058 Q6ZRN7 208 aaPredicted RBP13.08□□□□□ -0.32
CCND3-212ENST00000510058 ZNF664Q8N3J9 261 aa13.08□□□□□ -0.32
CCND3-212ENST00000510058 C1orf43Q9BWL3 253 aa13.08□□□□□ -0.32
CCND3-212ENST00000510058 PSCAO43653 123 aa13.07□□□□□ -0.32
CCND3-212ENST00000510058 MRPS36P82909 103 aaKnown RBP13.07□□□□□ -0.32
CCND3-212ENST00000510058 CHCHD1Q96BP2 118 aaKnown RBP13.06□□□□□ -0.32
CCND3-212ENST00000510058 IGKV2D-24A0A075B6R9 120 aa13.05□□□□□ -0.32
CCND3-212ENST00000510058 CLPSL2Q6UWE3 100 aa13.05□□□□□ -0.32
CCND3-212ENST00000510058 TOMM6Q96B49 74 aa13.05□□□□□ -0.32
CCND3-212ENST00000510058 CCL25O15444 150 aa13.04□□□□□ -0.32
CCND3-212ENST00000510058 PAPPA-AS1Q5QFB9 102 aa13.04□□□□□ -0.32
CCND3-212ENST00000510058 PRSS29PA6NIE9 313 aa13.03□□□□□ -0.32
CCND3-212ENST00000510058 BAGE3Q86Y29 109 aa13.03□□□□□ -0.32
CCND3-212ENST00000510058 URB1-AS1Q96HZ7 61 aa13.03□□□□□ -0.32
CCND3-212ENST00000510058 TIMM17AQ99595 171 aa13.03□□□□□ -0.32
CCND3-212ENST00000510058 Q6ZN92 141 aa13.02□□□□□ -0.33
CCND3-212ENST00000510058 Q6ZUT4 128 aa13.02□□□□□ -0.33
CCND3-212ENST00000510058 DNAH2Q9P225 4427 aa13.02□□□□□ -0.33
CCND3-212ENST00000510058 SS18Q15532 418 aa13.01□□□□□ -0.33
CCND3-212ENST00000510058 ERASQ7Z444 233 aa13.01□□□□□ -0.33
CCND3-212ENST00000510058 TMEM141Q96I45 108 aa13.01□□□□□ -0.33
CCND3-212ENST00000510058 IGLV4-3A0A075B6K6 122 aa13□□□□□ -0.33
CCND3-212ENST00000510058 IGKV3OR2-268A0A0C4DH90 116 aa13□□□□□ -0.33
CCND3-212ENST00000510058 IGIPA6NJ69 53 aa13□□□□□ -0.33
CCND3-212ENST00000510058 HBDP02042 147 aa13□□□□□ -0.33
CCND3-212ENST00000510058 LINC00959A0A1B0GUT2 108 aa12.99□□□□□ -0.33
CCND3-212ENST00000510058 EREGO14944 169 aa12.99□□□□□ -0.33
CCND3-212ENST00000510058 TEX43Q6ZNM6 134 aa12.99□□□□□ -0.33
CCND3-212ENST00000510058 SCGB3A1Q96QR1 104 aa12.99□□□□□ -0.33
CCND3-212ENST00000510058 FRAS1Q86XX4 4008 aa12.99□□□□□ -0.33
CCND3-212ENST00000510058 C1orf196B1AJZ1 125 aa12.98□□□□□ -0.33
CCND3-212ENST00000510058 HSBP1O75506 76 aa12.98□□□□□ -0.33
CCND3-212ENST00000510058 TNP2Q05952 138 aa12.98□□□□□ -0.33
CCND3-212ENST00000510058 C2orf88Q9BSF0 95 aa12.98□□□□□ -0.33
CCND3-212ENST00000510058 IGLV10-54A0A075B6I4 117 aa12.97□□□□□ -0.33
CCND3-212ENST00000510058 CHCHD10Q8WYQ3 142 aaPredicted RBP12.97□□□□□ -0.33
CCND3-212ENST00000510058 FAM104AQ969W3 186 aa12.97□□□□□ -0.33
CCND3-212ENST00000510058 VCX2Q9H322 139 aa12.97□□□□□ -0.33
CCND3-212ENST00000510058 A0A096LNJ9 63 aa12.96□□□□□ -0.33
CCND3-212ENST00000510058 IFITM10A6NMD0 228 aa12.96□□□□□ -0.33
CCND3-212ENST00000510058 HIST1H2BKO60814 126 aa12.96□□□□□ -0.33
CCND3-212ENST00000510058 HIST1H2BJP06899 126 aa12.96□□□□□ -0.33
CCND3-212ENST00000510058 HIST1H2BOP23527 126 aa12.96□□□□□ -0.33
CCND3-212ENST00000510058 HIST1H2BBP33778 126 aa12.96□□□□□ -0.33
CCND3-212ENST00000510058 HIST1H2BDP58876 126 aa12.96□□□□□ -0.33
CCND3-212ENST00000510058 HIST1H2BCP62807 126 aa12.96□□□□□ -0.33
CCND3-212ENST00000510058 HIST2H2BEQ16778 126 aa12.96□□□□□ -0.33
CCND3-212ENST00000510058 RNASE13Q5GAN3 156 aaKnown RBP12.96□□□□□ -0.33
CCND3-212ENST00000510058 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.96□□□□□ -0.33
CCND3-212ENST00000510058 KRTAP26-1Q6PEX3 210 aa12.96□□□□□ -0.33
CCND3-212ENST00000510058 HIST1H2BHQ93079 126 aa12.96□□□□□ -0.33
CCND3-212ENST00000510058 HIST1H2BNQ99877 126 aa12.96□□□□□ -0.33
CCND3-212ENST00000510058 HIST1H2BMQ99879 126 aa12.96□□□□□ -0.33
CCND3-212ENST00000510058 DNAH10Q8IVF4 4471 aa12.96□□□□□ -0.34
CCND3-212ENST00000510058 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.95□□□□□ -0.34
CCND3-212ENST00000510058 AMELXQ99217 191 aa12.95□□□□□ -0.34
CCND3-212ENST00000510058 OPRPNQ99935 248 aaPredicted RBP12.95□□□□□ -0.34
CCND3-212ENST00000510058 DNAH17Q9UFH2 4485 aa12.94□□□□□ -0.34
CCND3-212ENST00000510058 A0A087WTM6 91 aa12.94□□□□□ -0.34
CCND3-212ENST00000510058 TRAV13-1A0A0B4J241 112 aa12.94□□□□□ -0.34
CCND3-212ENST00000510058 LRCOL1A6NCL2 159 aa12.94□□□□□ -0.34
CCND3-212ENST00000510058 ATP5LO75964 103 aa12.94□□□□□ -0.34
CCND3-212ENST00000510058 CD164L2Q6UWJ8 174 aa12.94□□□□□ -0.34
CCND3-212ENST00000510058 SERF1AO75920 110 aa12.93□□□□□ -0.34
CCND3-212ENST00000510058 C14orf177Q52M58 125 aa12.93□□□□□ -0.34
CCND3-212ENST00000510058 PDZD11Q5EBL8 140 aa12.93□□□□□ -0.34
CCND3-212ENST00000510058 MAPKAPK5-AS1Q8N8E1 139 aa12.93□□□□□ -0.34
CCND3-212ENST00000510058 GAGE12HA6NDE8 117 aa12.92□□□□□ -0.34
CCND3-212ENST00000510058 XCL1P47992 114 aa12.92□□□□□ -0.34
CCND3-212ENST00000510058 PMCHL1Q16048 86 aa12.92□□□□□ -0.34
CCND3-212ENST00000510058 SEC11AP67812 179 aa12.91□□□□□ -0.34
CCND3-212ENST00000510058 BAALCQ8WXS3 180 aa12.91□□□□□ -0.34
CCND3-212ENST00000510058 FOXI1Q12951 378 aa12.9□□□□□ -0.34
CCND3-212ENST00000510058 CFAP161Q6P656 301 aa12.9□□□□□ -0.34
CCND3-212ENST00000510058 LINC00173Q6ZV60 143 aa12.9□□□□□ -0.34
CCND3-212ENST00000510058 A0A1B0GVY2 172 aa12.89□□□□□ -0.35
CCND3-212ENST00000510058 UBE2D1P51668 147 aa12.89□□□□□ -0.35
CCND3-212ENST00000510058 LINC00310P59036 64 aa12.89□□□□□ -0.35
CCND3-212ENST00000510058 FAM19A3Q7Z5A8 133 aa12.89□□□□□ -0.35
CCND3-212ENST00000510058 Q8N814 137 aa12.89□□□□□ -0.35
CCND3-212ENST00000510058 FAT2Q9NYQ8 4349 aa12.89□□□□□ -0.35
CCND3-212ENST00000510058 PMVKQ15126 192 aa12.88□□□□□ -0.35
CCND3-212ENST00000510058 USP17L23D6RBM5 183 aa12.87□□□□□ -0.35
CCND3-212ENST00000510058 COA6Q5JTJ3 125 aaKnown RBP12.87□□□□□ -0.35
CCND3-212ENST00000510058 FAM19A2Q8N3H0 131 aa12.87□□□□□ -0.35
CCND3-212ENST00000510058 NTN5Q8WTR8 489 aaPredicted RBP12.87□□□□□ -0.35
CCND3-212ENST00000510058 COX7A2LO14548 114 aa12.86□□□□□ -0.35
CCND3-212ENST00000510058 LEPROTL1O95214 131 aa12.86□□□□□ -0.35
CCND3-212ENST00000510058 HERVK_113P63121 156 aa12.86□□□□□ -0.35
CCND3-212ENST00000510058 LINC00242Q5T6M2 205 aa12.86□□□□□ -0.35
CCND3-212ENST00000510058 CDPF1Q6NVV7 123 aa12.86□□□□□ -0.35
CCND3-212ENST00000510058 IGHV3OR16-9A0A0B4J2B5 98 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms