RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 A0A096LNI7 61 aa5.31□□□□□ -1.56
COL4A3BP-206ENST00000508809 A0A0A0MQY5 61 aa5.31□□□□□ -1.56
COL4A3BP-206ENST00000508809 C19orf71A6NCJ1 209 aa5.31□□□□□ -1.56
COL4A3BP-206ENST00000508809 F2Z2F3 143 aa5.31□□□□□ -1.56
COL4A3BP-206ENST00000508809 UBE2L6O14933 153 aa5.31□□□□□ -1.56
COL4A3BP-206ENST00000508809 MGPP08493 103 aa5.31□□□□□ -1.56
COL4A3BP-206ENST00000508809 RPL35P42766 123 aaKnown RBP5.31□□□□□ -1.56
COL4A3BP-206ENST00000508809 SULT1A2P50226 295 aa5.31□□□□□ -1.56
COL4A3BP-206ENST00000508809 RPS20P60866 119 aaKnown RBP5.31□□□□□ -1.56
COL4A3BP-206ENST00000508809 COTL1Q14019 142 aa5.31□□□□□ -1.56
COL4A3BP-206ENST00000508809 HIGD2BQ4VC39 106 aa5.31□□□□□ -1.56
COL4A3BP-206ENST00000508809 FER1L6-AS1Q8NA97 138 aa5.31□□□□□ -1.56
COL4A3BP-206ENST00000508809 LYPD6BQ8NI32 183 aa5.31□□□□□ -1.56
COL4A3BP-206ENST00000508809 SFT2D1Q8WV19 159 aa5.31□□□□□ -1.56
COL4A3BP-206ENST00000508809 PAM16Q9Y3D7 125 aa5.31□□□□□ -1.56
COL4A3BP-206ENST00000508809 UMAD1C9J7I0 102 aa5.3□□□□□ -1.56
COL4A3BP-206ENST00000508809 PFDN1O60925 122 aa5.3□□□□□ -1.56
COL4A3BP-206ENST00000508809 Q6ZRP5 223 aa5.3□□□□□ -1.56
COL4A3BP-206ENST00000508809 CHCHD10Q8WYQ3 142 aaPredicted RBP5.3□□□□□ -1.56
COL4A3BP-206ENST00000508809 CHTOPQ9Y3Y2 248 aaKnown RBP5.3□□□□□ -1.56
COL4A3BP-206ENST00000508809 H7C423 109 aa5.29□□□□□ -1.56
COL4A3BP-206ENST00000508809 TRGC1P0CF51 173 aa5.29□□□□□ -1.56
COL4A3BP-206ENST00000508809 NTF3P20783 257 aa5.29□□□□□ -1.56
COL4A3BP-206ENST00000508809 C9orf62Q8N4C0 152 aa5.29□□□□□ -1.56
COL4A3BP-206ENST00000508809 KCNRGQ8N5I3 272 aa5.29□□□□□ -1.56
COL4A3BP-206ENST00000508809 OR2D3Q8NGH3 330 aa5.29□□□□□ -1.56
COL4A3BP-206ENST00000508809 C11orf52Q96A22 123 aa5.29□□□□□ -1.56
COL4A3BP-206ENST00000508809 IGKV3OR2-268A0A0C4DH90 116 aa5.28□□□□□ -1.56
COL4A3BP-206ENST00000508809 ARPC5O15511 151 aa5.28□□□□□ -1.56
COL4A3BP-206ENST00000508809 NCR2O95944 276 aa5.28□□□□□ -1.56
COL4A3BP-206ENST00000508809 LYZL1Q6UWQ5 148 aa5.28□□□□□ -1.56
COL4A3BP-206ENST00000508809 GATD1Q8NB37 220 aa5.28□□□□□ -1.56
COL4A3BP-206ENST00000508809 FAM213BQ8TBF2 198 aa5.28□□□□□ -1.56
COL4A3BP-206ENST00000508809 SMIM12Q96EX1 92 aa5.28□□□□□ -1.56
COL4A3BP-206ENST00000508809 CNFNQ9BYD5 112 aa5.28□□□□□ -1.56
COL4A3BP-206ENST00000508809 PKIGQ9Y2B9 76 aa5.28□□□□□ -1.56
COL4A3BP-206ENST00000508809 A0A1B0GV50 99 aa5.27□□□□□ -1.57
COL4A3BP-206ENST00000508809 IFNA1P01562 189 aa5.27□□□□□ -1.57
COL4A3BP-206ENST00000508809 CENPWQ5EE01 88 aa5.27□□□□□ -1.57
COL4A3BP-206ENST00000508809 OR5A1Q8NGJ0 315 aa5.27□□□□□ -1.57
COL4A3BP-206ENST00000508809 IGHV1-58A0A0C4DH39 117 aa5.26□□□□□ -1.57
COL4A3BP-206ENST00000508809 H0Y8G0 127 aa5.26□□□□□ -1.57
COL4A3BP-206ENST00000508809 FGF6P10767 208 aa5.26□□□□□ -1.57
COL4A3BP-206ENST00000508809 TAGLN2P37802 199 aaKnown RBP5.26□□□□□ -1.57
COL4A3BP-206ENST00000508809 CCL20P78556 96 aa5.26□□□□□ -1.57
COL4A3BP-206ENST00000508809 ZNF345Q14585 488 aa5.26□□□□□ -1.57
COL4A3BP-206ENST00000508809 AMMECR1LQ6DCA0 310 aa5.26□□□□□ -1.57
COL4A3BP-206ENST00000508809 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.25□□□□□ -1.57
COL4A3BP-206ENST00000508809 TRAV1-1A0A0B4J248 108 aa5.25□□□□□ -1.57
COL4A3BP-206ENST00000508809 LINC00959A0A1B0GUT2 108 aa5.25□□□□□ -1.57
COL4A3BP-206ENST00000508809 A0A1W2PNN7 141 aa5.25□□□□□ -1.57
COL4A3BP-206ENST00000508809 IGKV2-29A2NJV5 120 aaPredicted RBP5.25□□□□□ -1.57
COL4A3BP-206ENST00000508809 RAB19A4D1S5 217 aa5.25□□□□□ -1.57
COL4A3BP-206ENST00000508809 FAM231BA6NCW3 169 aa5.25□□□□□ -1.57
COL4A3BP-206ENST00000508809 ZNF25P17030 456 aaPredicted RBP5.25□□□□□ -1.57
COL4A3BP-206ENST00000508809 MT3P25713 68 aa5.25□□□□□ -1.57
COL4A3BP-206ENST00000508809 CTRLP40313 264 aa5.25□□□□□ -1.57
COL4A3BP-206ENST00000508809 XCL1P47992 114 aa5.25□□□□□ -1.57
COL4A3BP-206ENST00000508809 RNASEKQ6P5S7 137 aaKnown RBP5.25□□□□□ -1.57
COL4A3BP-206ENST00000508809 LINC00526Q96FQ7 95 aa5.25□□□□□ -1.57
COL4A3BP-206ENST00000508809 CARD19Q96LW7 228 aa5.25□□□□□ -1.57
COL4A3BP-206ENST00000508809 MANBALQ9NQG1 85 aa5.25□□□□□ -1.57
COL4A3BP-206ENST00000508809 TRBV20OR9-2A0A075B6H5 130 aa5.24□□□□□ -1.57
COL4A3BP-206ENST00000508809 TRAV26-2A0A0B4J265 109 aa5.24□□□□□ -1.57
COL4A3BP-206ENST00000508809 SDHAF1A6NFY7 115 aa5.24□□□□□ -1.57
COL4A3BP-206ENST00000508809 HMSDA8MTL9 139 aa5.24□□□□□ -1.57
COL4A3BP-206ENST00000508809 CCL25O15444 150 aa5.24□□□□□ -1.57
COL4A3BP-206ENST00000508809 APCSP02743 223 aa5.24□□□□□ -1.57
COL4A3BP-206ENST00000508809 ESDP10768 282 aa5.24□□□□□ -1.57
COL4A3BP-206ENST00000508809 GNG4P50150 75 aa5.24□□□□□ -1.57
COL4A3BP-206ENST00000508809 SYCNQ0VAF6 134 aa5.24□□□□□ -1.57
COL4A3BP-206ENST00000508809 TEX261Q6UWH6 196 aa5.24□□□□□ -1.57
COL4A3BP-206ENST00000508809 CD164L2Q6UWJ8 174 aa5.24□□□□□ -1.57
COL4A3BP-206ENST00000508809 ZNF664Q8N3J9 261 aa5.24□□□□□ -1.57
COL4A3BP-206ENST00000508809 RPL39LQ96EH5 51 aaKnown RBP5.24□□□□□ -1.57
COL4A3BP-206ENST00000508809 FAM210AQ96ND0 272 aa5.24□□□□□ -1.57
COL4A3BP-206ENST00000508809 BIN3Q9NQY0 253 aa5.24□□□□□ -1.57
COL4A3BP-206ENST00000508809 GNG13Q9P2W3 67 aa5.24□□□□□ -1.57
COL4A3BP-206ENST00000508809 FAT4Q6V0I7 4981 aa5.24□□□□□ -1.57
COL4A3BP-206ENST00000508809 TRBV6-5A0A0K0K1A5 114 aa5.23□□□□□ -1.57
COL4A3BP-206ENST00000508809 I3L3M4 83 aa5.23□□□□□ -1.57
COL4A3BP-206ENST00000508809 KRTAP2-2Q9BYT5 123 aa5.23□□□□□ -1.57
COL4A3BP-206ENST00000508809 CDC42SE2Q9NRR3 84 aa5.23□□□□□ -1.57
COL4A3BP-206ENST00000508809 PSORS1C2Q9UIG4 136 aa5.23□□□□□ -1.57
COL4A3BP-206ENST00000508809 LOC107984640A0A0U1RRK4 108 aa5.22□□□□□ -1.57
COL4A3BP-206ENST00000508809 SMLR1H3BR10 107 aa5.22□□□□□ -1.57
COL4A3BP-206ENST00000508809 BCL2L11O43521 198 aa5.22□□□□□ -1.57
COL4A3BP-206ENST00000508809 PDE6DO43924 150 aa5.22□□□□□ -1.57
COL4A3BP-206ENST00000508809 FOXA3P55318 350 aaPredicted RBP5.22□□□□□ -1.57
COL4A3BP-206ENST00000508809 GAGE2BQ13066 116 aa5.22□□□□□ -1.57
COL4A3BP-206ENST00000508809 SS18Q15532 418 aa5.22□□□□□ -1.57
COL4A3BP-206ENST00000508809 MRPL52Q86TS9 123 aaKnown RBP5.22□□□□□ -1.57
COL4A3BP-206ENST00000508809 NUP35Q8NFH5 326 aa5.22□□□□□ -1.57
COL4A3BP-206ENST00000508809 ISOC2Q96AB3 205 aa5.22□□□□□ -1.57
COL4A3BP-206ENST00000508809 TMEM101Q96IK0 257 aa5.22□□□□□ -1.57
COL4A3BP-206ENST00000508809 BTF3L4Q96K17 158 aa5.22□□□□□ -1.57
COL4A3BP-206ENST00000508809 MUC17Q685J3 4493 aa5.21□□□□□ -1.58
COL4A3BP-206ENST00000508809 PMCHP20382 165 aa5.21□□□□□ -1.58
COL4A3BP-206ENST00000508809 EIF5AP63241 154 aaKnown RBP5.21□□□□□ -1.58
COL4A3BP-206ENST00000508809 MEF2BQ02080 365 aaPredicted RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms