RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 APCSP02743 223 aa3.75□□□□□ -1.81
HMGB1P44-201ENST00000508597 PMCHP20382 165 aa3.75□□□□□ -1.81
HMGB1P44-201ENST00000508597 POLR2KP53803 58 aaKnown RBP3.75□□□□□ -1.81
HMGB1P44-201ENST00000508597 SMAGPQ0VAQ4 97 aa3.75□□□□□ -1.81
HMGB1P44-201ENST00000508597 COTL1Q14019 142 aa3.75□□□□□ -1.81
HMGB1P44-201ENST00000508597 ATRAIDQ6UW56 229 aa3.75□□□□□ -1.81
HMGB1P44-201ENST00000508597 SMIM29Q86T20 159 aa3.75□□□□□ -1.81
HMGB1P44-201ENST00000508597 PRELID3AQ96N28 172 aa3.75□□□□□ -1.81
HMGB1P44-201ENST00000508597 YPEL4Q96NS1 127 aa3.75□□□□□ -1.81
HMGB1P44-201ENST00000508597 TMEM70Q9BUB7 260 aa3.75□□□□□ -1.81
HMGB1P44-201ENST00000508597 LINC00588Q9Y4M8 146 aa3.75□□□□□ -1.81
HMGB1P44-201ENST00000508597 KMT2AQ03164 3969 aa3.75□□□□□ -1.81
HMGB1P44-201ENST00000508597 ALMS1Q8TCU4 4167 aa3.75□□□□□ -1.81
HMGB1P44-201ENST00000508597 DNAH6Q9C0G6 4158 aa3.75□□□□□ -1.81
HMGB1P44-201ENST00000508597 TRBV25-1A0A075B6N4 114 aa3.74□□□□□ -1.81
HMGB1P44-201ENST00000508597 TRBV6-8A0A0A6YYG3 113 aa3.74□□□□□ -1.81
HMGB1P44-201ENST00000508597 TGIF2-C20orf24A0A0A6YYL0 155 aa3.74□□□□□ -1.81
HMGB1P44-201ENST00000508597 TRAV26-2A0A0B4J265 109 aa3.74□□□□□ -1.81
HMGB1P44-201ENST00000508597 IGHV1-24A0A0C4DH33 117 aa3.74□□□□□ -1.81
HMGB1P44-201ENST00000508597 LINC01549A6NIU2 74 aa3.74□□□□□ -1.81
HMGB1P44-201ENST00000508597 SIVA1O15304 175 aa3.74□□□□□ -1.81
HMGB1P44-201ENST00000508597 LY6G6CO95867 125 aa3.74□□□□□ -1.81
HMGB1P44-201ENST00000508597 G0S2P27469 103 aa3.74□□□□□ -1.81
HMGB1P44-201ENST00000508597 FABP9Q0Z7S8 132 aa3.74□□□□□ -1.81
HMGB1P44-201ENST00000508597 IQCJQ1A5X6 159 aa3.74□□□□□ -1.81
HMGB1P44-201ENST00000508597 TTC32Q5I0X7 151 aa3.74□□□□□ -1.81
HMGB1P44-201ENST00000508597 CBLN2Q8IUK8 224 aa3.74□□□□□ -1.81
HMGB1P44-201ENST00000508597 C10orf126Q8N4M7 172 aa3.74□□□□□ -1.81
HMGB1P44-201ENST00000508597 RPL39LQ96EH5 51 aaKnown RBP3.74□□□□□ -1.81
HMGB1P44-201ENST00000508597 KIR2DL4Q99706 377 aa3.74□□□□□ -1.81
HMGB1P44-201ENST00000508597 MAP1LC3AQ9H492 121 aa3.74□□□□□ -1.81
HMGB1P44-201ENST00000508597 NXT2Q9NPJ8 142 aaKnown RBP3.74□□□□□ -1.81
HMGB1P44-201ENST00000508597 Q9UF83 564 aa3.74□□□□□ -1.81
HMGB1P44-201ENST00000508597 TRAPPC1Q9Y5R8 145 aa3.74□□□□□ -1.81
HMGB1P44-201ENST00000508597 IGHV3-38A0A0C4DH36 116 aa3.73□□□□□ -1.81
HMGB1P44-201ENST00000508597 TSHBP01222 138 aa3.73□□□□□ -1.81
HMGB1P44-201ENST00000508597 DNAH10OSP0CZ25 163 aa3.73□□□□□ -1.81
HMGB1P44-201ENST00000508597 RAB5AP20339 215 aa3.73□□□□□ -1.81
HMGB1P44-201ENST00000508597 RPS10P46783 165 aaKnown RBP3.73□□□□□ -1.81
HMGB1P44-201ENST00000508597 LINC01556Q5JQF7 62 aa3.73□□□□□ -1.81
HMGB1P44-201ENST00000508597 SMIM2Q9BVW6 85 aa3.73□□□□□ -1.81
HMGB1P44-201ENST00000508597 A0A087WX48 190 aa3.72□□□□□ -1.81
HMGB1P44-201ENST00000508597 C5orf52A6NGY3 159 aa3.72□□□□□ -1.81
HMGB1P44-201ENST00000508597 COLCA2A8K830 154 aa3.72□□□□□ -1.81
HMGB1P44-201ENST00000508597 SMKR1H3BMG3 65 aa3.72□□□□□ -1.81
HMGB1P44-201ENST00000508597 UBE2L6O14933 153 aa3.72□□□□□ -1.81
HMGB1P44-201ENST00000508597 GAS8-AS1O95177 125 aa3.72□□□□□ -1.81
HMGB1P44-201ENST00000508597 NPYP01303 97 aa3.72□□□□□ -1.81
HMGB1P44-201ENST00000508597 ESDP10768 282 aa3.72□□□□□ -1.81
HMGB1P44-201ENST00000508597 ZNF25P17030 456 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P44-201ENST00000508597 FCER1GP30273 86 aa3.72□□□□□ -1.81
HMGB1P44-201ENST00000508597 RAB5BP61020 215 aa3.72□□□□□ -1.81
HMGB1P44-201ENST00000508597 ORMDL2Q53FV1 153 aa3.72□□□□□ -1.81
HMGB1P44-201ENST00000508597 NTM-AS1Q6ZSK4 140 aa3.72□□□□□ -1.81
HMGB1P44-201ENST00000508597 NIT1Q86X76 327 aa3.72□□□□□ -1.81
HMGB1P44-201ENST00000508597 MAPKAPK5-AS1Q8N8E1 139 aa3.72□□□□□ -1.81
HMGB1P44-201ENST00000508597 Q8N8P6 123 aa3.72□□□□□ -1.81
HMGB1P44-201ENST00000508597 ALKBH7Q9BT30 221 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P44-201ENST00000508597 TMEM243Q9BU79 118 aa3.72□□□□□ -1.81
HMGB1P44-201ENST00000508597 VPS13DQ5THJ4 4388 aa3.72□□□□□ -1.81
HMGB1P44-201ENST00000508597 KMT2CQ8NEZ4 4911 aaKnown RBP3.71□□□□□ -1.81
HMGB1P44-201ENST00000508597 DNAH1Q9P2D7 4330 aa3.71□□□□□ -1.82
HMGB1P44-201ENST00000508597 IGLV2-18A0A075B6J9 118 aa3.71□□□□□ -1.82
HMGB1P44-201ENST00000508597 NBDYA0A0U1RRE5 68 aa3.71□□□□□ -1.82
HMGB1P44-201ENST00000508597 LAGE3Q14657 143 aa3.71□□□□□ -1.82
HMGB1P44-201ENST00000508597 KIAA1644Q3SXP7 199 aa3.71□□□□□ -1.82
HMGB1P44-201ENST00000508597 CHCHD5Q9BSY4 110 aa3.71□□□□□ -1.82
HMGB1P44-201ENST00000508597 TIMM21Q9BVV7 248 aa3.71□□□□□ -1.82
HMGB1P44-201ENST00000508597 CSDC2Q9Y534 153 aaKnown RBP3.71□□□□□ -1.82
HMGB1P44-201ENST00000508597 TRAV8-3A0A0A6YYJ7 113 aa3.7□□□□□ -1.82
HMGB1P44-201ENST00000508597 LINC01546A6NGU7 62 aa3.7□□□□□ -1.82
HMGB1P44-201ENST00000508597 IBA57-AS1B1ANH7 110 aa3.7□□□□□ -1.82
HMGB1P44-201ENST00000508597 TMEM262E9PQX1 116 aa3.7□□□□□ -1.82
HMGB1P44-201ENST00000508597 Q0VG73 95 aa3.7□□□□□ -1.82
HMGB1P44-201ENST00000508597 LBHQ53QV2 105 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P44-201ENST00000508597 AMMECR1LQ6DCA0 310 aa3.7□□□□□ -1.82
HMGB1P44-201ENST00000508597 Q6ZR54 194 aa3.7□□□□□ -1.82
HMGB1P44-201ENST00000508597 MRPL52Q86TS9 123 aaKnown RBP3.7□□□□□ -1.82
HMGB1P44-201ENST00000508597 WFDC10BQ8IUB3 73 aa3.7□□□□□ -1.82
HMGB1P44-201ENST00000508597 C20orf203Q8NBC4 194 aa3.7□□□□□ -1.82
HMGB1P44-201ENST00000508597 TMEM101Q96IK0 257 aa3.7□□□□□ -1.82
HMGB1P44-201ENST00000508597 IGLV9-49A0A0B4J1Y8 123 aa3.69□□□□□ -1.82
HMGB1P44-201ENST00000508597 LOC389332A0A1B0GUA5 103 aa3.69□□□□□ -1.82
HMGB1P44-201ENST00000508597 CCL25O15444 150 aa3.69□□□□□ -1.82
HMGB1P44-201ENST00000508597 SCO1O75880 301 aa3.69□□□□□ -1.82
HMGB1P44-201ENST00000508597 TRGC2P03986 189 aa3.69□□□□□ -1.82
HMGB1P44-201ENST00000508597 LINC00614P0C842 121 aa3.69□□□□□ -1.82
HMGB1P44-201ENST00000508597 FGF6P10767 208 aa3.69□□□□□ -1.82
HMGB1P44-201ENST00000508597 IFI27P40305 119 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P44-201ENST00000508597 RBX1P62877 108 aa3.69□□□□□ -1.82
HMGB1P44-201ENST00000508597 S100A12P80511 92 aa3.69□□□□□ -1.82
HMGB1P44-201ENST00000508597 KRTAP5-11Q6L8G4 156 aa3.69□□□□□ -1.82
HMGB1P44-201ENST00000508597 FA2HQ7L5A8 372 aa3.69□□□□□ -1.82
HMGB1P44-201ENST00000508597 C18orf32Q8TCD1 76 aa3.69□□□□□ -1.82
HMGB1P44-201ENST00000508597 CHCHD1Q96BP2 118 aaKnown RBP3.69□□□□□ -1.82
HMGB1P44-201ENST00000508597 RMI2Q96E14 147 aa3.69□□□□□ -1.82
HMGB1P44-201ENST00000508597 SPANXA1Q9NS26 97 aa3.69□□□□□ -1.82
HMGB1P44-201ENST00000508597 CYSLTR1Q9Y271 337 aa3.69□□□□□ -1.82
HMGB1P44-201ENST00000508597 PYGO1Q9Y3Y4 419 aa3.69□□□□□ -1.82
HMGB1P44-201ENST00000508597 SACSQ9NZJ4 4579 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms