RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 ST20Q9HBF5 79 aa9.12□□□□□ -0.95
RAB28-205ENST00000508274 IGHV3-64A0A075B6Q5 118 aa9.12□□□□□ -0.95
RAB28-205ENST00000508274 SMKR1H3BMG3 65 aa9.12□□□□□ -0.95
RAB28-205ENST00000508274 HNRNPA3P51991 378 aaKnown RBP9.12□□□□□ -0.95
RAB28-205ENST00000508274 RPL23P62829 140 aaKnown RBP9.12□□□□□ -0.95
RAB28-205ENST00000508274 SRSF3P84103 164 aaKnown RBP9.12□□□□□ -0.95
RAB28-205ENST00000508274 NUP35Q8NFH5 326 aa9.12□□□□□ -0.95
RAB28-205ENST00000508274 ESDP10768 282 aa9.11□□□□□ -0.95
RAB28-205ENST00000508274 POLR2KP53803 58 aaKnown RBP9.11□□□□□ -0.95
RAB28-205ENST00000508274 CIRBPQ14011 172 aaKnown RBP9.11□□□□□ -0.95
RAB28-205ENST00000508274 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.1□□□□□ -0.95
RAB28-205ENST00000508274 ZNF25P17030 456 aaPredicted RBP9.1□□□□□ -0.95
RAB28-205ENST00000508274 TMEM241Q24JQ0 296 aa9.1□□□□□ -0.95
RAB28-205ENST00000508274 OR5A1Q8NGJ0 315 aa9.1□□□□□ -0.95
RAB28-205ENST00000508274 MRAP2Q96G30 205 aa9.1□□□□□ -0.95
RAB28-205ENST00000508274 TRBV27A0A0K0K1C4 114 aa9.09□□□□□ -0.95
RAB28-205ENST00000508274 FOXI1Q12951 378 aa9.09□□□□□ -0.95
RAB28-205ENST00000508274 ADIRFQ15847 76 aa9.09□□□□□ -0.95
RAB28-205ENST00000508274 CFAP161Q6P656 301 aa9.09□□□□□ -0.95
RAB28-205ENST00000508274 BTF3L4Q96K17 158 aa9.09□□□□□ -0.95
RAB28-205ENST00000508274 XCL1P47992 114 aa9.08□□□□□ -0.96
RAB28-205ENST00000508274 RIGQ13278 110 aa9.08□□□□□ -0.96
RAB28-205ENST00000508274 SPACA4Q8TDM5 124 aa9.08□□□□□ -0.96
RAB28-205ENST00000508274 TMEM101Q96IK0 257 aa9.08□□□□□ -0.96
RAB28-205ENST00000508274 A0A087WYN8 130 aa9.07□□□□□ -0.96
RAB28-205ENST00000508274 LINC00959A0A1B0GUT2 108 aa9.07□□□□□ -0.96
RAB28-205ENST00000508274 CCL25O15444 150 aa9.07□□□□□ -0.96
RAB28-205ENST00000508274 FAM74A3Q4VXF1 159 aa9.07□□□□□ -0.96
RAB28-205ENST00000508274 NRACQ8N912 160 aa9.07□□□□□ -0.96
RAB28-205ENST00000508274 NAT8Q9UHE5 227 aa9.07□□□□□ -0.96
RAB28-205ENST00000508274 NAT8BQ9UHF3 227 aa9.07□□□□□ -0.96
RAB28-205ENST00000508274 GVQW2A0A096LPI5 108 aaPredicted RBP9.07□□□□□ -0.96
RAB28-205ENST00000508274 C7orf77A4D0Y5 90 aa9.07□□□□□ -0.96
RAB28-205ENST00000508274 COX6A2Q02221 97 aa9.07□□□□□ -0.96
RAB28-205ENST00000508274 MRPL52Q86TS9 123 aaKnown RBP9.06□□□□□ -0.96
RAB28-205ENST00000508274 LINC00526Q96FQ7 95 aa9.06□□□□□ -0.96
RAB28-205ENST00000508274 DPH3Q96FX2 82 aa9.06□□□□□ -0.96
RAB28-205ENST00000508274 CDC42SE2Q9NRR3 84 aa9.06□□□□□ -0.96
RAB28-205ENST00000508274 SMIM27A0A1W2PRY6 76 aa9.05□□□□□ -0.96
RAB28-205ENST00000508274 SUMO2P61956 95 aaKnown RBP9.05□□□□□ -0.96
RAB28-205ENST00000508274 MRPL51Q4U2R6 128 aaKnown RBP9.05□□□□□ -0.96
RAB28-205ENST00000508274 PRSS3P2Q8NHM4 247 aa9.05□□□□□ -0.96
RAB28-205ENST00000508274 IGKV2-24A0A0C4DH68 120 aa9.04□□□□□ -0.96
RAB28-205ENST00000508274 FCER1GP30273 86 aa9.04□□□□□ -0.96
RAB28-205ENST00000508274 CAMPP49913 170 aa9.04□□□□□ -0.96
RAB28-205ENST00000508274 PEA15Q15121 130 aa9.04□□□□□ -0.96
RAB28-205ENST00000508274 FAM104BQ5XKR9 115 aa9.04□□□□□ -0.96
RAB28-205ENST00000508274 VCYO14598 125 aa9.03□□□□□ -0.96
RAB28-205ENST00000508274 OXTP01178 125 aa9.03□□□□□ -0.96
RAB28-205ENST00000508274 RNASE13Q5GAN3 156 aaKnown RBP9.03□□□□□ -0.96
RAB28-205ENST00000508274 ZNF664Q8N3J9 261 aa9.03□□□□□ -0.96
RAB28-205ENST00000508274 SS18Q15532 418 aa9.03□□□□□ -0.96
RAB28-205ENST00000508274 PLAC8Q9NZF1 115 aa9.03□□□□□ -0.96
RAB28-205ENST00000508274 UBE2D4Q9Y2X8 147 aa9.03□□□□□ -0.96
RAB28-205ENST00000508274 IGHV1-58A0A0C4DH39 117 aa9.02□□□□□ -0.97
RAB28-205ENST00000508274 PPP1R17O96001 155 aa9.02□□□□□ -0.97
RAB28-205ENST00000508274 MAJINQ3KP22 176 aa9.02□□□□□ -0.97
RAB28-205ENST00000508274 MRPL54Q6P161 138 aaKnown RBP9.02□□□□□ -0.97
RAB28-205ENST00000508274 A0A096LNI7 61 aa9.01□□□□□ -0.97
RAB28-205ENST00000508274 UQCC3Q6UW78 93 aa9.01□□□□□ -0.97
RAB28-205ENST00000508274 CD164L2Q6UWJ8 174 aa9.01□□□□□ -0.97
RAB28-205ENST00000508274 KIR2DL4Q99706 377 aa9.01□□□□□ -0.97
RAB28-205ENST00000508274 PHOX2AO14813 284 aa9□□□□□ -0.97
RAB28-205ENST00000508274 PPP1R2P9O14990 202 aa9□□□□□ -0.97
RAB28-205ENST00000508274 Q6ZUT4 128 aa9□□□□□ -0.97
RAB28-205ENST00000508274 SMDT1Q9H4I9 107 aa9□□□□□ -0.97
RAB28-205ENST00000508274 CKS2P33552 79 aa8.99□□□□□ -0.97
RAB28-205ENST00000508274 STPG4Q8N801 248 aa8.99□□□□□ -0.97
RAB28-205ENST00000508274 CSDC2Q9Y534 153 aaKnown RBP8.99□□□□□ -0.97
RAB28-205ENST00000508274 TRBV24-1A0A075B6N3 115 aa8.99□□□□□ -0.97
RAB28-205ENST00000508274 TRAV13-1A0A0B4J241 112 aa8.99□□□□□ -0.97
RAB28-205ENST00000508274 A0A1B0GW15 77 aa8.99□□□□□ -0.97
RAB28-205ENST00000508274 A0A1B0GXF2 115 aa8.99□□□□□ -0.97
RAB28-205ENST00000508274 D6R8Y8 96 aa8.99□□□□□ -0.97
RAB28-205ENST00000508274 TNFRSF6BO95407 300 aa8.99□□□□□ -0.97
RAB28-205ENST00000508274 RPL39P62891 51 aaKnown RBP8.99□□□□□ -0.97
RAB28-205ENST00000508274 HBBP68871 147 aa8.99□□□□□ -0.97
RAB28-205ENST00000508274 CARD19Q96LW7 228 aa8.99□□□□□ -0.97
RAB28-205ENST00000508274 HMCN2Q8NDA2 5059 aa8.98□□□□□ -0.97
RAB28-205ENST00000508274 NPYP01303 97 aa8.98□□□□□ -0.97
RAB28-205ENST00000508274 C20orf78Q9BR46 151 aa8.98□□□□□ -0.97
RAB28-205ENST00000508274 C1orf196B1AJZ1 125 aa8.97□□□□□ -0.97
RAB28-205ENST00000508274 ZNF561-AS1K7EIQ3 104 aa8.97□□□□□ -0.97
RAB28-205ENST00000508274 SMIM2Q9BVW6 85 aa8.97□□□□□ -0.97
RAB28-205ENST00000508274 IGLV4-69A0A075B6H9 119 aa8.96□□□□□ -0.97
RAB28-205ENST00000508274 RPL32P62910 135 aaKnown RBP8.96□□□□□ -0.97
RAB28-205ENST00000508274 SYCNQ0VAF6 134 aa8.96□□□□□ -0.97
RAB28-205ENST00000508274 C7orf33Q8WU49 177 aa8.96□□□□□ -0.97
RAB28-205ENST00000508274 FAM104AQ969W3 186 aa8.96□□□□□ -0.97
RAB28-205ENST00000508274 F8W036 122 aa8.95□□□□□ -0.98
RAB28-205ENST00000508274 COX7A2LO14548 114 aa8.95□□□□□ -0.98
RAB28-205ENST00000508274 TCAPO15273 167 aa8.95□□□□□ -0.98
RAB28-205ENST00000508274 S100A8P05109 93 aa8.95□□□□□ -0.98
RAB28-205ENST00000508274 MALP21145 153 aa8.95□□□□□ -0.98
RAB28-205ENST00000508274 SMAGPQ0VAQ4 97 aa8.95□□□□□ -0.98
RAB28-205ENST00000508274 Q6ZRU5 148 aa8.95□□□□□ -0.98
RAB28-205ENST00000508274 C5orf38Q86SI9 138 aa8.95□□□□□ -0.98
RAB28-205ENST00000508274 TMEM18Q96B42 140 aa8.95□□□□□ -0.98
RAB28-205ENST00000508274 TIMM21Q9BVV7 248 aa8.95□□□□□ -0.98
RAB28-205ENST00000508274 TMEM218A2RU14 115 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms