RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 Q9HAA7 133 aa13.53□□□□□ -0.24
USP53-203ENST00000507597 PRR34Q9NV39 138 aa13.53□□□□□ -0.24
USP53-203ENST00000507597 C1orf196B1AJZ1 125 aa13.52□□□□□ -0.25
USP53-203ENST00000507597 CCL25O15444 150 aa13.52□□□□□ -0.25
USP53-203ENST00000507597 PSCAO43653 123 aa13.52□□□□□ -0.25
USP53-203ENST00000507597 RPL39P62891 51 aaKnown RBP13.52□□□□□ -0.25
USP53-203ENST00000507597 MRPS36P82909 103 aaKnown RBP13.52□□□□□ -0.25
USP53-203ENST00000507597 Q6ZN92 141 aa13.52□□□□□ -0.25
USP53-203ENST00000507597 TOMM6Q96B49 74 aa13.52□□□□□ -0.25
USP53-203ENST00000507597 CDC42SE2Q9NRR3 84 aa13.52□□□□□ -0.25
USP53-203ENST00000507597 DNAH1Q9P2D7 4330 aa13.51□□□□□ -0.25
USP53-203ENST00000507597 LINC00336Q6ZUF6 198 aa13.51□□□□□ -0.25
USP53-203ENST00000507597 IGKV2D-24A0A075B6R9 120 aa13.5□□□□□ -0.25
USP53-203ENST00000507597 HSBP1O75506 76 aa13.5□□□□□ -0.25
USP53-203ENST00000507597 TMEM141Q96I45 108 aa13.5□□□□□ -0.25
USP53-203ENST00000507597 HBDP02042 147 aa13.49□□□□□ -0.25
USP53-203ENST00000507597 SS18Q15532 418 aa13.49□□□□□ -0.25
USP53-203ENST00000507597 ENHOQ6UWT2 76 aa13.49□□□□□ -0.25
USP53-203ENST00000507597 ERASQ7Z444 233 aa13.49□□□□□ -0.25
USP53-203ENST00000507597 SCGB3A1Q96QR1 104 aa13.49□□□□□ -0.25
USP53-203ENST00000507597 TIMM17AQ99595 171 aa13.49□□□□□ -0.25
USP53-203ENST00000507597 CLPSL2Q6UWE3 100 aa13.47□□□□□ -0.25
USP53-203ENST00000507597 C2orf88Q9BSF0 95 aa13.47□□□□□ -0.25
USP53-203ENST00000507597 VCX2Q9H322 139 aa13.47□□□□□ -0.25
USP53-203ENST00000507597 IGKV3OR2-268A0A0C4DH90 116 aa13.46□□□□□ -0.25
USP53-203ENST00000507597 EREGO14944 169 aa13.46□□□□□ -0.25
USP53-203ENST00000507597 TEX43Q6ZNM6 134 aa13.46□□□□□ -0.25
USP53-203ENST00000507597 ATP5LO75964 103 aa13.45□□□□□ -0.26
USP53-203ENST00000507597 Q6ZUT4 128 aa13.45□□□□□ -0.26
USP53-203ENST00000507597 URB1-AS1Q96HZ7 61 aa13.45□□□□□ -0.26
USP53-203ENST00000507597 SACSQ9NZJ4 4579 aa13.45□□□□□ -0.26
USP53-203ENST00000507597 IGLV4-3A0A075B6K6 122 aa13.44□□□□□ -0.26
USP53-203ENST00000507597 IGIPA6NJ69 53 aa13.44□□□□□ -0.26
USP53-203ENST00000507597 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.44□□□□□ -0.26
USP53-203ENST00000507597 HIST1H2BKO60814 126 aa13.44□□□□□ -0.26
USP53-203ENST00000507597 HIST1H2BJP06899 126 aa13.44□□□□□ -0.26
USP53-203ENST00000507597 HIST1H2BOP23527 126 aa13.44□□□□□ -0.26
USP53-203ENST00000507597 HIST1H2BBP33778 126 aa13.44□□□□□ -0.26
USP53-203ENST00000507597 HIST1H2BDP58876 126 aa13.44□□□□□ -0.26
USP53-203ENST00000507597 HIST1H2BCP62807 126 aa13.44□□□□□ -0.26
USP53-203ENST00000507597 HIST2H2BEQ16778 126 aa13.44□□□□□ -0.26
USP53-203ENST00000507597 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.44□□□□□ -0.26
USP53-203ENST00000507597 HIST1H2BHQ93079 126 aa13.44□□□□□ -0.26
USP53-203ENST00000507597 HIST1H2BNQ99877 126 aa13.44□□□□□ -0.26
USP53-203ENST00000507597 HIST1H2BMQ99879 126 aa13.44□□□□□ -0.26
USP53-203ENST00000507597 LINC00959A0A1B0GUT2 108 aa13.43□□□□□ -0.26
USP53-203ENST00000507597 IFITM10A6NMD0 228 aa13.42□□□□□ -0.26
USP53-203ENST00000507597 SERF1AO75920 110 aa13.42□□□□□ -0.26
USP53-203ENST00000507597 IGLV10-54A0A075B6I4 117 aa13.41□□□□□ -0.26
USP53-203ENST00000507597 RTL8CO15255 209 aa13.41□□□□□ -0.26
USP53-203ENST00000507597 SEC11AP67812 179 aa13.41□□□□□ -0.26
USP53-203ENST00000507597 Q6ZRN7 208 aaPredicted RBP13.41□□□□□ -0.26
USP53-203ENST00000507597 KMT2AQ03164 3969 aa13.41□□□□□ -0.26
USP53-203ENST00000507597 DNAH6Q9C0G6 4158 aa13.41□□□□□ -0.26
USP53-203ENST00000507597 TRAV13-1A0A0B4J241 112 aa13.4□□□□□ -0.26
USP53-203ENST00000507597 PRSS29PA6NIE9 313 aa13.4□□□□□ -0.26
USP53-203ENST00000507597 PMCHL1Q16048 86 aa13.39□□□□□ -0.27
USP53-203ENST00000507597 RNASE13Q5GAN3 156 aaKnown RBP13.39□□□□□ -0.27
USP53-203ENST00000507597 CHCHD10Q8WYQ3 142 aaPredicted RBP13.39□□□□□ -0.27
USP53-203ENST00000507597 AMELXQ99217 191 aa13.39□□□□□ -0.27
USP53-203ENST00000507597 OPRPNQ99935 248 aaPredicted RBP13.39□□□□□ -0.27
USP53-203ENST00000507597 C14orf177Q52M58 125 aa13.38□□□□□ -0.27
USP53-203ENST00000507597 PDZD11Q5EBL8 140 aa13.38□□□□□ -0.27
USP53-203ENST00000507597 CFAP161Q6P656 301 aa13.38□□□□□ -0.27
USP53-203ENST00000507597 CD164L2Q6UWJ8 174 aa13.38□□□□□ -0.27
USP53-203ENST00000507597 HSPB8Q9UJY1 196 aa13.38□□□□□ -0.27
USP53-203ENST00000507597 LEPROTL1O95214 131 aa13.37□□□□□ -0.27
USP53-203ENST00000507597 PMVKQ15126 192 aa13.37□□□□□ -0.27
USP53-203ENST00000507597 A0A096LNJ9 63 aa13.36□□□□□ -0.27
USP53-203ENST00000507597 GAGE12HA6NDE8 117 aa13.36□□□□□ -0.27
USP53-203ENST00000507597 XCL1P47992 114 aa13.36□□□□□ -0.27
USP53-203ENST00000507597 NDUFA6P56556 154 aa13.36□□□□□ -0.27
USP53-203ENST00000507597 FAM19A2Q8N3H0 131 aa13.35□□□□□ -0.27
USP53-203ENST00000507597 S100A6P06703 90 aa13.34□□□□□ -0.27
USP53-203ENST00000507597 PRSS1P07477 247 aa13.34□□□□□ -0.27
USP53-203ENST00000507597 COA6Q5JTJ3 125 aaKnown RBP13.34□□□□□ -0.27
USP53-203ENST00000507597 BAALCQ8WXS3 180 aa13.34□□□□□ -0.27
USP53-203ENST00000507597 FAM104AQ969W3 186 aa13.34□□□□□ -0.27
USP53-203ENST00000507597 IFI27L1Q96BM0 104 aa13.34□□□□□ -0.27
USP53-203ENST00000507597 PACRGQ96M98 296 aaPredicted RBP13.34□□□□□ -0.27
USP53-203ENST00000507597 HYDINQ4G0P3 5121 aa13.34□□□□□ -0.27
USP53-203ENST00000507597 UBE2D1P51668 147 aa13.33□□□□□ -0.28
USP53-203ENST00000507597 TNP2Q05952 138 aa13.33□□□□□ -0.28
USP53-203ENST00000507597 RYR2Q92736 4967 aa13.33□□□□□ -0.28
USP53-203ENST00000507597 A0A087WTM6 91 aa13.32□□□□□ -0.28
USP53-203ENST00000507597 COX7A2LO14548 114 aa13.32□□□□□ -0.28
USP53-203ENST00000507597 APOMO95445 188 aa13.32□□□□□ -0.28
USP53-203ENST00000507597 MALP21145 153 aa13.32□□□□□ -0.28
USP53-203ENST00000507597 HERVK_113P63121 156 aa13.32□□□□□ -0.28
USP53-203ENST00000507597 CST9LQ9H4G1 147 aa13.32□□□□□ -0.28
USP53-203ENST00000507597 GEMIN7Q9H840 131 aaKnown RBP13.32□□□□□ -0.28
USP53-203ENST00000507597 LINC00310P59036 64 aa13.31□□□□□ -0.28
USP53-203ENST00000507597 FOXI1Q12951 378 aa13.31□□□□□ -0.28
USP53-203ENST00000507597 KRTAP26-1Q6PEX3 210 aa13.31□□□□□ -0.28
USP53-203ENST00000507597 FAM19A3Q7Z5A8 133 aa13.31□□□□□ -0.28
USP53-203ENST00000507597 LINC00173Q6ZV60 143 aa13.3□□□□□ -0.28
USP53-203ENST00000507597 LRCOL1A6NCL2 159 aa13.29□□□□□ -0.28
USP53-203ENST00000507597 NUPR1O60356 82 aa13.29□□□□□ -0.28
USP53-203ENST00000507597 LINC00242Q5T6M2 205 aa13.29□□□□□ -0.28
USP53-203ENST00000507597 TRAV12-1A0A0B4J245 112 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms