RNA–Protein interactions for RNA: ENST00000507116.5

PDE4D-216, Transcript of phosphodiesterase 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE4D, Length 3,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-216ENST00000507116 K7EQG2 157 aa4.39□□□□□ -1.71
PDE4D-216ENST00000507116 PATE4P0C8F1 98 aa4.39□□□□□ -1.71
PDE4D-216ENST00000507116 SAA1P0DJI8 122 aaPredicted RBP4.39□□□□□ -1.71
PDE4D-216ENST00000507116 LINC01547P58512 204 aaPredicted RBP4.39□□□□□ -1.71
PDE4D-216ENST00000507116 X6R8D5 127 aa4.39□□□□□ -1.71
PDE4D-216ENST00000507116 CELSR3Q9NYQ7 3312 aa4.39□□□□□ -1.71
PDE4D-216ENST00000507116 LINC00308Q8TCZ7 52 aa4.39□□□□□ -1.71
PDE4D-216ENST00000507116 RPL39LQ96EH5 51 aaKnown RBP4.39□□□□□ -1.71
PDE4D-216ENST00000507116 CFAP47Q6ZTR5 3102 aa4.38□□□□□ -1.71
PDE4D-216ENST00000507116 PIEZO2Q9H5I5 2752 aa4.38□□□□□ -1.71
PDE4D-216ENST00000507116 IGHV3-48P01763 117 aa4.38□□□□□ -1.71
PDE4D-216ENST00000507116 FDCSPQ8NFU4 85 aa4.38□□□□□ -1.71
PDE4D-216ENST00000507116 COL6A6A6NMZ7 2263 aa4.38□□□□□ -1.71
PDE4D-216ENST00000507116 A6NED7 52 aa4.38□□□□□ -1.71
PDE4D-216ENST00000507116 RNF223E7ERA6 249 aa4.38□□□□□ -1.71
PDE4D-216ENST00000507116 C9orf116Q5BN46 136 aaPredicted RBP4.38□□□□□ -1.71
PDE4D-216ENST00000507116 DNAJC13O75165 2243 aa4.38□□□□□ -1.71
PDE4D-216ENST00000507116 IGKV2-40A0A087WW87 121 aaPredicted RBP4.37□□□□□ -1.71
PDE4D-216ENST00000507116 BPY2O14599 106 aa4.37□□□□□ -1.71
PDE4D-216ENST00000507116 IGKV2D-40P01614 121 aaPredicted RBP4.37□□□□□ -1.71
PDE4D-216ENST00000507116 C18orf65Q6ZTR6 163 aa4.37□□□□□ -1.71
PDE4D-216ENST00000507116 CCL4L1Q8NHW4 92 aa4.37□□□□□ -1.71
PDE4D-216ENST00000507116 ARRDC1-AS1Q9H2J1 176 aa4.37□□□□□ -1.71
PDE4D-216ENST00000507116 DEC1Q9P2X7 70 aa4.37□□□□□ -1.71
PDE4D-216ENST00000507116 ZFHX3Q15911 3703 aa4.37□□□□□ -1.71
PDE4D-216ENST00000507116 ASCC3Q8N3C0 2202 aaKnown RBP4.37□□□□□ -1.71
PDE4D-216ENST00000507116 SPEGQ15772 3267 aa4.37□□□□□ -1.71
PDE4D-216ENST00000507116 DMDP11532 3685 aa4.37□□□□□ -1.71
PDE4D-216ENST00000507116 H3BRN7 92 aa4.37□□□□□ -1.71
PDE4D-216ENST00000507116 RPL39P62891 51 aaKnown RBP4.37□□□□□ -1.71
PDE4D-216ENST00000507116 Q75L30 129 aa4.37□□□□□ -1.71
PDE4D-216ENST00000507116 IGHV7-4-1A0A0J9YVY3 117 aa4.37□□□□□ -1.71
PDE4D-216ENST00000507116 HAMPP81172 84 aa4.37□□□□□ -1.71
PDE4D-216ENST00000507116 ZNF580Q9UK33 172 aa4.37□□□□□ -1.71
PDE4D-216ENST00000507116 DSPP15924 2871 aaKnown RBP4.37□□□□□ -1.71
PDE4D-216ENST00000507116 A0A0J9YXV3 536 aa4.36□□□□□ -1.71
PDE4D-216ENST00000507116 C19orf54Q5BKX5 351 aa4.36□□□□□ -1.71
PDE4D-216ENST00000507116 Q8TAT8 98 aa4.36□□□□□ -1.71
PDE4D-216ENST00000507116 DEFB126Q9BYW3 111 aa4.36□□□□□ -1.71
PDE4D-216ENST00000507116 FREM2Q5SZK8 3169 aa4.36□□□□□ -1.71
PDE4D-216ENST00000507116 A0A087WYN8 130 aa4.36□□□□□ -1.71
PDE4D-216ENST00000507116 IGHV1-18A0A0C4DH31 117 aa4.36□□□□□ -1.71
PDE4D-216ENST00000507116 C3orf84H3BNL1 204 aa4.36□□□□□ -1.71
PDE4D-216ENST00000507116 WT1-ASQ06250 92 aa4.36□□□□□ -1.71
PDE4D-216ENST00000507116 CHD6Q8TD26 2715 aa4.36□□□□□ -1.71
PDE4D-216ENST00000507116 IGKV3D-20A0A0C4DH25 116 aa4.36□□□□□ -1.71
PDE4D-216ENST00000507116 TFF1P04155 84 aa4.36□□□□□ -1.71
PDE4D-216ENST00000507116 RNASE13Q5GAN3 156 aaKnown RBP4.36□□□□□ -1.71
PDE4D-216ENST00000507116 ZFAND3Q9H8U3 227 aa4.36□□□□□ -1.71
PDE4D-216ENST00000507116 NDUFA1O15239 70 aa4.35□□□□□ -1.71
PDE4D-216ENST00000507116 CRPP02741 224 aa4.35□□□□□ -1.71
PDE4D-216ENST00000507116 SPINK2P20155 84 aa4.35□□□□□ -1.71
PDE4D-216ENST00000507116 PTPRQQ9UMZ3 2332 aa4.35□□□□□ -1.71
PDE4D-216ENST00000507116 FRYQ5TBA9 3013 aa4.35□□□□□ -1.71
PDE4D-216ENST00000507116 SVILO95425 2214 aa4.35□□□□□ -1.71
PDE4D-216ENST00000507116 IGHV3OR16-9A0A0B4J2B5 98 aa4.35□□□□□ -1.71
PDE4D-216ENST00000507116 C19orf84I3L1E1 186 aa4.35□□□□□ -1.71
PDE4D-216ENST00000507116 MGPP08493 103 aa4.35□□□□□ -1.71
PDE4D-216ENST00000507116 SAA2P0DJI9 122 aaPredicted RBP4.35□□□□□ -1.71
PDE4D-216ENST00000507116 MOBPQ13875 183 aa4.35□□□□□ -1.71
PDE4D-216ENST00000507116 PRR15LQ9BU68 103 aa4.35□□□□□ -1.71
PDE4D-216ENST00000507116 LINC00574Q9H8X3 128 aa4.35□□□□□ -1.71
PDE4D-216ENST00000507116 PATE3B3GLJ2 98 aa4.34□□□□□ -1.71
PDE4D-216ENST00000507116 LECT2O14960 151 aa4.34□□□□□ -1.71
PDE4D-216ENST00000507116 LY6HO94772 140 aa4.34□□□□□ -1.71
PDE4D-216ENST00000507116 IGHV3-9P01782 118 aa4.34□□□□□ -1.71
PDE4D-216ENST00000507116 GNLYP22749 145 aa4.34□□□□□ -1.71
PDE4D-216ENST00000507116 PRR3P79522 188 aaKnown RBP4.34□□□□□ -1.71
PDE4D-216ENST00000507116 LEAP2Q969E1 77 aa4.34□□□□□ -1.71
PDE4D-216ENST00000507116 TNCP24821 2201 aa4.34□□□□□ -1.71
PDE4D-216ENST00000507116 DCHS1Q96JQ0 3298 aa4.34□□□□□ -1.71
PDE4D-216ENST00000507116 IGLV3-9A0A075B6K5 115 aa4.34□□□□□ -1.71
PDE4D-216ENST00000507116 DEFB110Q30KQ9 67 aa4.34□□□□□ -1.71
PDE4D-216ENST00000507116 SCXQ7RTU7 201 aa4.34□□□□□ -1.71
PDE4D-216ENST00000507116 IGHV6-1A0A0B4J1U7 121 aa4.34□□□□□ -1.72
PDE4D-216ENST00000507116 TRBV10-1A0A0K0K1A3 114 aa4.34□□□□□ -1.72
PDE4D-216ENST00000507116 ZNHIT1O43257 154 aa4.34□□□□□ -1.72
PDE4D-216ENST00000507116 POLR2KP53803 58 aaKnown RBP4.34□□□□□ -1.72
PDE4D-216ENST00000507116 HIGD2AQ9BW72 106 aa4.34□□□□□ -1.72
PDE4D-216ENST00000507116 CDC42SE2Q9NRR3 84 aa4.34□□□□□ -1.72
PDE4D-216ENST00000507116 IGHV4OR15-8A0A075B7B6 117 aa4.33□□□□□ -1.72
PDE4D-216ENST00000507116 A0A087WW49 117 aa4.33□□□□□ -1.72
PDE4D-216ENST00000507116 OCR1Q9BZK8 76 aa4.33□□□□□ -1.72
PDE4D-216ENST00000507116 PKD1L2Q7Z442 2459 aa4.33□□□□□ -1.72
PDE4D-216ENST00000507116 SDK2Q58EX2 2172 aa4.33□□□□□ -1.72
PDE4D-216ENST00000507116 IGKV2-29A2NJV5 120 aaPredicted RBP4.33□□□□□ -1.72
PDE4D-216ENST00000507116 ASB16-AS1Q495Z4 193 aa4.33□□□□□ -1.72
PDE4D-216ENST00000507116 TMEM167AQ8TBQ9 72 aa4.33□□□□□ -1.72
PDE4D-216ENST00000507116 ZNF462Q96JM2 2506 aa4.33□□□□□ -1.72
PDE4D-216ENST00000507116 CADP27708 2225 aa4.33□□□□□ -1.72
PDE4D-216ENST00000507116 SPTBN1Q01082 2364 aaKnown RBP4.33□□□□□ -1.72
PDE4D-216ENST00000507116 IGKV3D-11A0A0A0MRZ8 115 aa4.33□□□□□ -1.72
PDE4D-216ENST00000507116 FAM30AQ9NZY2 134 aa4.33□□□□□ -1.72
PDE4D-216ENST00000507116 C1orf229Q6ZS94 237 aaPredicted RBP4.32□□□□□ -1.72
PDE4D-216ENST00000507116 NAV2Q8IVL1 2488 aa4.32□□□□□ -1.72
PDE4D-216ENST00000507116 IGHV3-15A0A0B4J1V0 119 aa4.32□□□□□ -1.72
PDE4D-216ENST00000507116 FBXL19-AS1Q494R0 122 aa4.32□□□□□ -1.72
PDE4D-216ENST00000507116 Q8N9P0 234 aaPredicted RBP4.32□□□□□ -1.72
PDE4D-216ENST00000507116 DEFB124Q8NES8 71 aa4.32□□□□□ -1.72
PDE4D-216ENST00000507116 CASC2Q6XLA1 102 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms