RNA–Protein interactions for RNA: ENST00000506963.1

SFXN1-205, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-205ENST00000506963 FRAS1Q86XX4 4008 aa6.47□□□□□ -1.37
SFXN1-205ENST00000506963 A0A087WTM6 91 aa6.46□□□□□ -1.38
SFXN1-205ENST00000506963 LOC389332A0A1B0GUA5 103 aa6.46□□□□□ -1.38
SFXN1-205ENST00000506963 COLCA2A8K830 154 aa6.46□□□□□ -1.38
SFXN1-205ENST00000506963 IFI27P40305 119 aaPredicted RBP6.46□□□□□ -1.38
SFXN1-205ENST00000506963 ORMDL2Q53FV1 153 aa6.46□□□□□ -1.38
SFXN1-205ENST00000506963 MAPKAPK5-AS1Q8N8E1 139 aa6.46□□□□□ -1.38
SFXN1-205ENST00000506963 C1orf43Q9BWL3 253 aa6.46□□□□□ -1.38
SFXN1-205ENST00000506963 PYGO1Q9Y3Y4 419 aa6.46□□□□□ -1.38
SFXN1-205ENST00000506963 FAT2Q9NYQ8 4349 aa6.45□□□□□ -1.38
SFXN1-205ENST00000506963 IGKV2D-24A0A075B6R9 120 aa6.45□□□□□ -1.38
SFXN1-205ENST00000506963 PSCAO43653 123 aa6.45□□□□□ -1.38
SFXN1-205ENST00000506963 NPSP0C0P6 89 aa6.45□□□□□ -1.38
SFXN1-205ENST00000506963 G0S2P27469 103 aa6.45□□□□□ -1.38
SFXN1-205ENST00000506963 MRPS36P82909 103 aaKnown RBP6.45□□□□□ -1.38
SFXN1-205ENST00000506963 DGAT2L7PQ6IED9 249 aa6.45□□□□□ -1.38
SFXN1-205ENST00000506963 ZNF664Q8N3J9 261 aa6.45□□□□□ -1.38
SFXN1-205ENST00000506963 FAM104AQ969W3 186 aa6.45□□□□□ -1.38
SFXN1-205ENST00000506963 LINC01549A6NIU2 74 aa6.44□□□□□ -1.38
SFXN1-205ENST00000506963 CCL25O15444 150 aa6.44□□□□□ -1.38
SFXN1-205ENST00000506963 RPL39P62891 51 aaKnown RBP6.44□□□□□ -1.38
SFXN1-205ENST00000506963 PRSS3P2Q8NHM4 247 aa6.44□□□□□ -1.38
SFXN1-205ENST00000506963 C18orf32Q8TCD1 76 aa6.44□□□□□ -1.38
SFXN1-205ENST00000506963 CYSLTR1Q9Y271 337 aa6.44□□□□□ -1.38
SFXN1-205ENST00000506963 EREGO14944 169 aa6.43□□□□□ -1.38
SFXN1-205ENST00000506963 S100A1P23297 94 aa6.43□□□□□ -1.38
SFXN1-205ENST00000506963 CLPSL2Q6UWE3 100 aa6.43□□□□□ -1.38
SFXN1-205ENST00000506963 C2orf66Q6UXQ4 117 aa6.43□□□□□ -1.38
SFXN1-205ENST00000506963 EPPK1P58107 5090 aaKnown RBP6.43□□□□□ -1.38
SFXN1-205ENST00000506963 LINC00959A0A1B0GUT2 108 aa6.42□□□□□ -1.38
SFXN1-205ENST00000506963 IGIPA6NJ69 53 aa6.42□□□□□ -1.38
SFXN1-205ENST00000506963 CDPF1Q6NVV7 123 aa6.42□□□□□ -1.38
SFXN1-205ENST00000506963 Q6ZUT4 128 aa6.42□□□□□ -1.38
SFXN1-205ENST00000506963 Q8N814 137 aa6.42□□□□□ -1.38
SFXN1-205ENST00000506963 TOMM6Q96B49 74 aa6.42□□□□□ -1.38
SFXN1-205ENST00000506963 URB1-AS1Q96HZ7 61 aa6.42□□□□□ -1.38
SFXN1-205ENST00000506963 IGLV4-3A0A075B6K6 122 aa6.41□□□□□ -1.38
SFXN1-205ENST00000506963 TRGC2P03986 189 aa6.41□□□□□ -1.38
SFXN1-205ENST00000506963 LINC00614P0C842 121 aa6.41□□□□□ -1.38
SFXN1-205ENST00000506963 RAB5BP61020 215 aa6.41□□□□□ -1.38
SFXN1-205ENST00000506963 WFDC2Q14508 124 aa6.41□□□□□ -1.38
SFXN1-205ENST00000506963 FA2HQ7L5A8 372 aa6.41□□□□□ -1.38
SFXN1-205ENST00000506963 NTN5Q8WTR8 489 aaPredicted RBP6.41□□□□□ -1.38
SFXN1-205ENST00000506963 BAALCQ8WXS3 180 aa6.41□□□□□ -1.38
SFXN1-205ENST00000506963 CHCHD10Q8WYQ3 142 aaPredicted RBP6.41□□□□□ -1.38
SFXN1-205ENST00000506963 TIMM17AQ99595 171 aa6.41□□□□□ -1.38
SFXN1-205ENST00000506963 AP5S1Q9NUS5 200 aa6.41□□□□□ -1.38
SFXN1-205ENST00000506963 PGPEP1Q9NXJ5 209 aa6.41□□□□□ -1.38
SFXN1-205ENST00000506963 HECTD4Q9Y4D8 3996 aa6.4□□□□□ -1.38
SFXN1-205ENST00000506963 IGLV10-54A0A075B6I4 117 aa6.4□□□□□ -1.38
SFXN1-205ENST00000506963 C1orf196B1AJZ1 125 aa6.4□□□□□ -1.38
SFXN1-205ENST00000506963 ATP6V1G1O75348 118 aa6.4□□□□□ -1.38
SFXN1-205ENST00000506963 SCO1O75880 301 aa6.4□□□□□ -1.38
SFXN1-205ENST00000506963 KRTAP10-2P60368 255 aa6.4□□□□□ -1.38
SFXN1-205ENST00000506963 SS18Q15532 418 aa6.4□□□□□ -1.38
SFXN1-205ENST00000506963 C14orf177Q52M58 125 aa6.4□□□□□ -1.38
SFXN1-205ENST00000506963 SPATA12Q7Z6I5 190 aa6.4□□□□□ -1.38
SFXN1-205ENST00000506963 TMEM141Q96I45 108 aa6.4□□□□□ -1.38
SFXN1-205ENST00000506963 AMELXQ99217 191 aa6.4□□□□□ -1.38
SFXN1-205ENST00000506963 PKD1P98161 4303 aa6.4□□□□□ -1.39
SFXN1-205ENST00000506963 A0A096LNJ9 63 aa6.39□□□□□ -1.39
SFXN1-205ENST00000506963 IGKV3OR2-268A0A0C4DH90 116 aa6.39□□□□□ -1.39
SFXN1-205ENST00000506963 GAGE12HA6NDE8 117 aa6.39□□□□□ -1.39
SFXN1-205ENST00000506963 FOXI1Q12951 378 aa6.39□□□□□ -1.39
SFXN1-205ENST00000506963 PAPPA-AS1Q5QFB9 102 aa6.39□□□□□ -1.39
SFXN1-205ENST00000506963 CD164L2Q6UWJ8 174 aa6.39□□□□□ -1.39
SFXN1-205ENST00000506963 ERASQ7Z444 233 aa6.39□□□□□ -1.39
SFXN1-205ENST00000506963 CHCHD1Q96BP2 118 aaKnown RBP6.39□□□□□ -1.39
SFXN1-205ENST00000506963 OPRPNQ99935 248 aaPredicted RBP6.39□□□□□ -1.39
SFXN1-205ENST00000506963 DNAH11Q96DT5 4516 aa6.38□□□□□ -1.39
SFXN1-205ENST00000506963 BIRC6Q9NR09 4857 aa6.38□□□□□ -1.39
SFXN1-205ENST00000506963 USP17L23D6RBM5 183 aa6.38□□□□□ -1.39
SFXN1-205ENST00000506963 RNASE13Q5GAN3 156 aaKnown RBP6.38□□□□□ -1.39
SFXN1-205ENST00000506963 LINC00173Q6ZV60 143 aa6.38□□□□□ -1.39
SFXN1-205ENST00000506963 FAM19A3Q7Z5A8 133 aa6.38□□□□□ -1.39
SFXN1-205ENST00000506963 TRAV13-1A0A0B4J241 112 aa6.37□□□□□ -1.39
SFXN1-205ENST00000506963 IFITM10A6NMD0 228 aa6.37□□□□□ -1.39
SFXN1-205ENST00000506963 LECT2O14960 151 aa6.37□□□□□ -1.39
SFXN1-205ENST00000506963 HBDP02042 147 aa6.37□□□□□ -1.39
SFXN1-205ENST00000506963 XCL1P47992 114 aa6.37□□□□□ -1.39
SFXN1-205ENST00000506963 PDZD11Q5EBL8 140 aa6.37□□□□□ -1.39
SFXN1-205ENST00000506963 CFAP161Q6P656 301 aa6.37□□□□□ -1.39
SFXN1-205ENST00000506963 Q6ZN92 141 aa6.37□□□□□ -1.39
SFXN1-205ENST00000506963 TEX43Q6ZNM6 134 aa6.37□□□□□ -1.39
SFXN1-205ENST00000506963 SCGB3A1Q96QR1 104 aa6.37□□□□□ -1.39
SFXN1-205ENST00000506963 VCX2Q9H322 139 aa6.37□□□□□ -1.39
SFXN1-205ENST00000506963 IGHV3OR16-9A0A0B4J2B5 98 aa6.36□□□□□ -1.39
SFXN1-205ENST00000506963 UBE2D1P51668 147 aa6.36□□□□□ -1.39
SFXN1-205ENST00000506963 LINC00242Q5T6M2 205 aa6.36□□□□□ -1.39
SFXN1-205ENST00000506963 C15orf56Q8N910 161 aa6.36□□□□□ -1.39
SFXN1-205ENST00000506963 C2orf88Q9BSF0 95 aa6.36□□□□□ -1.39
SFXN1-205ENST00000506963 GVQW2A0A096LPI5 108 aaPredicted RBP6.35□□□□□ -1.39
SFXN1-205ENST00000506963 IGLV5-52A0A0A0MRZ9 124 aa6.35□□□□□ -1.39
SFXN1-205ENST00000506963 C16orf90A8MZG2 172 aa6.35□□□□□ -1.39
SFXN1-205ENST00000506963 PRSS1P07477 247 aa6.35□□□□□ -1.39
SFXN1-205ENST00000506963 IGHV1-58A0A0C4DH39 117 aa6.34□□□□□ -1.39
SFXN1-205ENST00000506963 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.34□□□□□ -1.39
SFXN1-205ENST00000506963 COX7A2LO14548 114 aa6.34□□□□□ -1.39
SFXN1-205ENST00000506963 ATP5LO75964 103 aa6.34□□□□□ -1.39
SFXN1-205ENST00000506963 LINC00310P59036 64 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms