RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 CDK2AP2O75956 126 aa13.14□□□□□ -0.31
SNX25-204ENST00000506896 OR5A1Q8NGJ0 315 aa13.14□□□□□ -0.31
SNX25-204ENST00000506896 BAALCQ8WXS3 180 aa13.14□□□□□ -0.31
SNX25-204ENST00000506896 GNB1LQ9BYB4 327 aa13.14□□□□□ -0.31
SNX25-204ENST00000506896 KRTAP17-1Q9BYP8 105 aa13.13□□□□□ -0.31
SNX25-204ENST00000506896 MAP1LC3AQ9H492 121 aa13.13□□□□□ -0.31
SNX25-204ENST00000506896 PCLOQ9Y6V0 5065 aa13.12□□□□□ -0.31
SNX25-204ENST00000506896 RAB5AP20339 215 aa13.12□□□□□ -0.31
SNX25-204ENST00000506896 CSDC2Q9Y534 153 aaKnown RBP13.12□□□□□ -0.31
SNX25-204ENST00000506896 MT-ND6P03923 174 aa13.11□□□□□ -0.31
SNX25-204ENST00000506896 DGAT2L7PQ6IED9 249 aa13.11□□□□□ -0.31
SNX25-204ENST00000506896 IGLV10-54A0A075B6I4 117 aa13.1□□□□□ -0.31
SNX25-204ENST00000506896 LECT2O14960 151 aa13.1□□□□□ -0.31
SNX25-204ENST00000506896 WFDC2Q14508 124 aa13.1□□□□□ -0.31
SNX25-204ENST00000506896 C14orf177Q52M58 125 aa13.1□□□□□ -0.31
SNX25-204ENST00000506896 KRTAP26-1Q6PEX3 210 aa13.1□□□□□ -0.31
SNX25-204ENST00000506896 TIMM21Q9BVV7 248 aa13.1□□□□□ -0.31
SNX25-204ENST00000506896 CDC42SE2Q9NRR3 84 aa13.1□□□□□ -0.31
SNX25-204ENST00000506896 UBE2D4Q9Y2X8 147 aa13.1□□□□□ -0.31
SNX25-204ENST00000506896 IGLV5-52A0A0A0MRZ9 124 aa13.09□□□□□ -0.31
SNX25-204ENST00000506896 LOC389332A0A1B0GUA5 103 aa13.08□□□□□ -0.32
SNX25-204ENST00000506896 FUSP35637 526 aaKnown RBP eCLIP13.08□□□□□ -0.32
SNX25-204ENST00000506896 ZNF664Q8N3J9 261 aa13.08□□□□□ -0.32
SNX25-204ENST00000506896 Q8N8P6 123 aa13.08□□□□□ -0.32
SNX25-204ENST00000506896 IGKV3OR2-268A0A0C4DH90 116 aa13.07□□□□□ -0.32
SNX25-204ENST00000506896 K7EMI3 77 aa13.07□□□□□ -0.32
SNX25-204ENST00000506896 SLC7A5P1Q8MH63 180 aa13.07□□□□□ -0.32
SNX25-204ENST00000506896 NXT2Q9NPJ8 142 aaKnown RBP13.07□□□□□ -0.32
SNX25-204ENST00000506896 ABCA13Q86UQ4 5058 aa13.06□□□□□ -0.32
SNX25-204ENST00000506896 KIAA1644Q3SXP7 199 aa13.06□□□□□ -0.32
SNX25-204ENST00000506896 SPANXA1Q9NS26 97 aa13.06□□□□□ -0.32
SNX25-204ENST00000506896 USP17L23D6RBM5 183 aa13.05□□□□□ -0.32
SNX25-204ENST00000506896 GCSHP23434 173 aa13.05□□□□□ -0.32
SNX25-204ENST00000506896 KRTAP4-5Q9BYR2 181 aa13.05□□□□□ -0.32
SNX25-204ENST00000506896 MRPL18Q9H0U6 180 aaKnown RBP13.05□□□□□ -0.32
SNX25-204ENST00000506896 TGIF2-C20orf24A0A0A6YYL0 155 aa13.04□□□□□ -0.32
SNX25-204ENST00000506896 LINC00959A0A1B0GUT2 108 aa13.04□□□□□ -0.32
SNX25-204ENST00000506896 ORMDL2Q53FV1 153 aa13.04□□□□□ -0.32
SNX25-204ENST00000506896 CHCHD10Q8WYQ3 142 aaPredicted RBP13.04□□□□□ -0.32
SNX25-204ENST00000506896 DNAH8Q96JB1 4490 aa13.03□□□□□ -0.32
SNX25-204ENST00000506896 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.03□□□□□ -0.32
SNX25-204ENST00000506896 CCL25O15444 150 aa13.03□□□□□ -0.32
SNX25-204ENST00000506896 RPL39P62891 51 aaKnown RBP13.03□□□□□ -0.32
SNX25-204ENST00000506896 FABP9Q0Z7S8 132 aa13.03□□□□□ -0.32
SNX25-204ENST00000506896 SS18Q15532 418 aa13.03□□□□□ -0.32
SNX25-204ENST00000506896 GAGE12HA6NDE8 117 aa13.02□□□□□ -0.33
SNX25-204ENST00000506896 ALKBH7Q9BT30 221 aaPredicted RBP13.02□□□□□ -0.33
SNX25-204ENST00000506896 G0S2P27469 103 aa13.01□□□□□ -0.33
SNX25-204ENST00000506896 IFI27P40305 119 aaPredicted RBP13.01□□□□□ -0.33
SNX25-204ENST00000506896 MRPS36P82909 103 aaKnown RBP13.01□□□□□ -0.33
SNX25-204ENST00000506896 TRAPPC1Q9Y5R8 145 aa13.01□□□□□ -0.33
SNX25-204ENST00000506896 CFAP161Q6P656 301 aa13□□□□□ -0.33
SNX25-204ENST00000506896 Q6ZUT4 128 aa13□□□□□ -0.33
SNX25-204ENST00000506896 CYSLTR1Q9Y271 337 aa13□□□□□ -0.33
SNX25-204ENST00000506896 PYGO1Q9Y3Y4 419 aa13□□□□□ -0.33
SNX25-204ENST00000506896 C1orf196B1AJZ1 125 aa12.99□□□□□ -0.33
SNX25-204ENST00000506896 XCL1P47992 114 aa12.99□□□□□ -0.33
SNX25-204ENST00000506896 KRTAP10-1P60331 282 aa12.99□□□□□ -0.33
SNX25-204ENST00000506896 PRSS3P2Q8NHM4 247 aa12.99□□□□□ -0.33
SNX25-204ENST00000506896 SMCO4Q9NRQ5 59 aa12.99□□□□□ -0.33
SNX25-204ENST00000506896 FOXI1Q12951 378 aa12.98□□□□□ -0.33
SNX25-204ENST00000506896 CD164L2Q6UWJ8 174 aa12.98□□□□□ -0.33
SNX25-204ENST00000506896 C2orf66Q6UXQ4 117 aa12.98□□□□□ -0.33
SNX25-204ENST00000506896 Q8N1X5 172 aa12.98□□□□□ -0.33
SNX25-204ENST00000506896 YPEL4Q96NS1 127 aa12.98□□□□□ -0.33
SNX25-204ENST00000506896 PRSS1P07477 247 aa12.97□□□□□ -0.33
SNX25-204ENST00000506896 XGP55808 180 aa12.97□□□□□ -0.33
SNX25-204ENST00000506896 RNASE13Q5GAN3 156 aaKnown RBP12.97□□□□□ -0.33
SNX25-204ENST00000506896 NPSP0C0P6 89 aa12.96□□□□□ -0.33
SNX25-204ENST00000506896 FAT1Q14517 4588 aa12.96□□□□□ -0.34
SNX25-204ENST00000506896 TRAV13-1A0A0B4J241 112 aa12.95□□□□□ -0.34
SNX25-204ENST00000506896 hDV102S1A0JD36 115 aa12.95□□□□□ -0.34
SNX25-204ENST00000506896 FAM104AQ969W3 186 aa12.95□□□□□ -0.34
SNX25-204ENST00000506896 LINC01546A6NGU7 62 aa12.94□□□□□ -0.34
SNX25-204ENST00000506896 LINC01549A6NIU2 74 aa12.94□□□□□ -0.34
SNX25-204ENST00000506896 CBLN2Q8IUK8 224 aa12.94□□□□□ -0.34
SNX25-204ENST00000506896 TMEM141Q96I45 108 aa12.94□□□□□ -0.34
SNX25-204ENST00000506896 AP5S1Q9NUS5 200 aa12.94□□□□□ -0.34
SNX25-204ENST00000506896 IGLV4-3A0A075B6K6 122 aa12.93□□□□□ -0.34
SNX25-204ENST00000506896 Q6ZN92 141 aa12.93□□□□□ -0.34
SNX25-204ENST00000506896 C15orf56Q8N910 161 aa12.93□□□□□ -0.34
SNX25-204ENST00000506896 OPRPNQ99935 248 aaPredicted RBP12.93□□□□□ -0.34
SNX25-204ENST00000506896 IFITM10A6NMD0 228 aa12.92□□□□□ -0.34
SNX25-204ENST00000506896 CNBPP62633 177 aaKnown RBP12.92□□□□□ -0.34
SNX25-204ENST00000506896 FA2HQ7L5A8 372 aa12.92□□□□□ -0.34
SNX25-204ENST00000506896 TOMM6Q96B49 74 aa12.92□□□□□ -0.34
SNX25-204ENST00000506896 IGHV1-58A0A0C4DH39 117 aa12.91□□□□□ -0.34
SNX25-204ENST00000506896 PAPPA-AS1Q5QFB9 102 aa12.91□□□□□ -0.34
SNX25-204ENST00000506896 TEX43Q6ZNM6 134 aa12.91□□□□□ -0.34
SNX25-204ENST00000506896 GVQW2A0A096LPI5 108 aaPredicted RBP12.9□□□□□ -0.34
SNX25-204ENST00000506896 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.9□□□□□ -0.34
SNX25-204ENST00000506896 IGIPA6NJ69 53 aa12.9□□□□□ -0.34
SNX25-204ENST00000506896 COX7A2LO14548 114 aa12.9□□□□□ -0.34
SNX25-204ENST00000506896 TIMM17AQ99595 171 aa12.9□□□□□ -0.34
SNX25-204ENST00000506896 C2orf88Q9BSF0 95 aa12.9□□□□□ -0.34
SNX25-204ENST00000506896 C9orf163Q8N9P6 203 aa12.89□□□□□ -0.35
SNX25-204ENST00000506896 C18orf32Q8TCD1 76 aa12.89□□□□□ -0.35
SNX25-204ENST00000506896 VCX2Q9H322 139 aa12.89□□□□□ -0.35
SNX25-204ENST00000506896 VPS13BQ7Z7G8 4022 aa12.88□□□□□ -0.35
SNX25-204ENST00000506896 MALP21145 153 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms