RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 ZNF705AQ6ZN79 300 aaPredicted RBP1.53□□□□□ -2.16
TRAPPC11-205ENST00000506426 ANKRD29Q8N6D5 301 aa1.53□□□□□ -2.16
TRAPPC11-205ENST00000506426 OR4B1Q8NGF8 309 aa1.53□□□□□ -2.16
TRAPPC11-205ENST00000506426 BTF3L4Q96K17 158 aa1.53□□□□□ -2.16
TRAPPC11-205ENST00000506426 DNAJC30Q96LL9 226 aa1.53□□□□□ -2.16
TRAPPC11-205ENST00000506426 TSC22D3Q99576 134 aa1.53□□□□□ -2.16
TRAPPC11-205ENST00000506426 Q9BRP9 147 aa1.53□□□□□ -2.16
TRAPPC11-205ENST00000506426 PDCD10Q9BUL8 212 aa1.53□□□□□ -2.16
TRAPPC11-205ENST00000506426 WDR61Q9GZS3 305 aaKnown RBP1.53□□□□□ -2.16
TRAPPC11-205ENST00000506426 COMMD3Q9UBI1 195 aa1.53□□□□□ -2.16
TRAPPC11-205ENST00000506426 HHLA3Q9XRX5 114 aa1.53□□□□□ -2.16
TRAPPC11-205ENST00000506426 HLA-DRB4X5D2U9 266 aa1.53□□□□□ -2.16
TRAPPC11-205ENST00000506426 VPS13BQ7Z7G8 4022 aa1.53□□□□□ -2.17
TRAPPC11-205ENST00000506426 HMCN2Q8NDA2 5059 aa1.52□□□□□ -2.17
TRAPPC11-205ENST00000506426 TRAV2A0A0B4J234 112 aa1.52□□□□□ -2.17
TRAPPC11-205ENST00000506426 TRGV4A0A0C4DH28 118 aa1.52□□□□□ -2.17
TRAPPC11-205ENST00000506426 A0A0J9YY99 117 aa1.52□□□□□ -2.17
TRAPPC11-205ENST00000506426 NBDYA0A0U1RRE5 68 aa1.52□□□□□ -2.17
TRAPPC11-205ENST00000506426 C3orf85A0A1B0GTC6 90 aa1.52□□□□□ -2.17
TRAPPC11-205ENST00000506426 CEBPZOSA8MTT3 80 aa1.52□□□□□ -2.17
TRAPPC11-205ENST00000506426 FAM25AB3EWG3 89 aa1.52□□□□□ -2.17
TRAPPC11-205ENST00000506426 FAM25CB3EWG5 89 aa1.52□□□□□ -2.17
TRAPPC11-205ENST00000506426 FAM25GB3EWG6 89 aa1.52□□□□□ -2.17
TRAPPC11-205ENST00000506426 LEPROTO15243 131 aa1.52□□□□□ -2.17
TRAPPC11-205ENST00000506426 IFNA21P01568 189 aa1.52□□□□□ -2.17
TRAPPC11-205ENST00000506426 CD3DP04234 171 aa1.52□□□□□ -2.17
TRAPPC11-205ENST00000506426 SPART-AS1P0CW21 52 aa1.52□□□□□ -2.17
TRAPPC11-205ENST00000506426 IAPPP10997 89 aa1.52□□□□□ -2.17
TRAPPC11-205ENST00000506426 HTN1P15515 57 aa1.52□□□□□ -2.17
TRAPPC11-205ENST00000506426 VBP1P61758 197 aa1.52□□□□□ -2.17
TRAPPC11-205ENST00000506426 SNRPD3P62318 126 aaKnown RBP1.52□□□□□ -2.17
TRAPPC11-205ENST00000506426 HIST1H4AP62805 103 aaKnown RBP1.52□□□□□ -2.17
TRAPPC11-205ENST00000506426 ERHP84090 104 aaKnown RBP1.52□□□□□ -2.17
TRAPPC11-205ENST00000506426 ZNF90Q03938 601 aa1.52□□□□□ -2.17
TRAPPC11-205ENST00000506426 SPINK13Q1W4C9 94 aa1.52□□□□□ -2.17
TRAPPC11-205ENST00000506426 RNASE10Q5GAN6 216 aaKnown RBP1.52□□□□□ -2.17
TRAPPC11-205ENST00000506426 LYZL1Q6UWQ5 148 aa1.52□□□□□ -2.17
TRAPPC11-205ENST00000506426 BORCS5Q969J3 196 aa1.52□□□□□ -2.17
TRAPPC11-205ENST00000506426 S100A16Q96FQ6 103 aaKnown RBP1.52□□□□□ -2.17
TRAPPC11-205ENST00000506426 IMMP2LQ96T52 175 aa1.52□□□□□ -2.17
TRAPPC11-205ENST00000506426 ENY2Q9NPA8 101 aa1.52□□□□□ -2.17
TRAPPC11-205ENST00000506426 FKBP11Q9NYL4 201 aa1.52□□□□□ -2.17
TRAPPC11-205ENST00000506426 IL36BQ9NZH7 164 aa1.52□□□□□ -2.17
TRAPPC11-205ENST00000506426 COPZ2Q9P299 210 aa1.52□□□□□ -2.17
TRAPPC11-205ENST00000506426 PAIP2BQ9ULR5 123 aaKnown RBP1.52□□□□□ -2.17
TRAPPC11-205ENST00000506426 TIMM9Q9Y5J7 89 aa1.52□□□□□ -2.17
TRAPPC11-205ENST00000506426 FLG2Q5D862 2391 aaPredicted RBP1.51□□□□□ -2.17
TRAPPC11-205ENST00000506426 TRAV26-2A0A0B4J265 109 aa1.51□□□□□ -2.17
TRAPPC11-205ENST00000506426 CORTO00230 105 aa1.51□□□□□ -2.17
TRAPPC11-205ENST00000506426 S100GP29377 79 aa1.51□□□□□ -2.17
TRAPPC11-205ENST00000506426 EIF2B2P49770 351 aaKnown RBP1.51□□□□□ -2.17
TRAPPC11-205ENST00000506426 CCL20P78556 96 aa1.51□□□□□ -2.17
TRAPPC11-205ENST00000506426 PSG9Q00887 426 aa1.51□□□□□ -2.17
TRAPPC11-205ENST00000506426 HIST1H1AQ02539 215 aaPredicted RBP1.51□□□□□ -2.17
TRAPPC11-205ENST00000506426 SS18Q15532 418 aa1.51□□□□□ -2.17
TRAPPC11-205ENST00000506426 RRN3P1Q2M238 152 aa1.51□□□□□ -2.17
TRAPPC11-205ENST00000506426 IAH1Q2TAA2 248 aaPredicted RBP1.51□□□□□ -2.17
TRAPPC11-205ENST00000506426 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.51□□□□□ -2.17
TRAPPC11-205ENST00000506426 FOXI2Q6ZQN5 318 aa1.51□□□□□ -2.17
TRAPPC11-205ENST00000506426 SIGMAR1Q99720 223 aa1.51□□□□□ -2.17
TRAPPC11-205ENST00000506426 TMEM147Q9BVK8 224 aa1.51□□□□□ -2.17
TRAPPC11-205ENST00000506426 VCX3BQ9H321 246 aa1.51□□□□□ -2.17
TRAPPC11-205ENST00000506426 NAA60Q9H7X0 242 aa1.51□□□□□ -2.17
TRAPPC11-205ENST00000506426 TMEM56-RWDD3S4R434 201 aa1.51□□□□□ -2.17
TRAPPC11-205ENST00000506426 TRAV30A0A087WSZ9 112 aa1.5□□□□□ -2.17
TRAPPC11-205ENST00000506426 A0A096LPF7 62 aa1.5□□□□□ -2.17
TRAPPC11-205ENST00000506426 FAM236DA0A1B0GTK5 79 aa1.5□□□□□ -2.17
TRAPPC11-205ENST00000506426 TMEM189A5PLL7 270 aa1.5□□□□□ -2.17
TRAPPC11-205ENST00000506426 CRYM-AS1A6NIL9 109 aa1.5□□□□□ -2.17
TRAPPC11-205ENST00000506426 H3BT86 120 aa1.5□□□□□ -2.17
TRAPPC11-205ENST00000506426 SMR3BP02814 79 aaPredicted RBP1.5□□□□□ -2.17
TRAPPC11-205ENST00000506426 SULT1A3P0DMM9 295 aa1.5□□□□□ -2.17
TRAPPC11-205ENST00000506426 SULT1A4P0DMN0 295 aa1.5□□□□□ -2.17
TRAPPC11-205ENST00000506426 FAM236CP0DP71 79 aa1.5□□□□□ -2.17
TRAPPC11-205ENST00000506426 SLC25A4P12235 298 aa1.5□□□□□ -2.17
TRAPPC11-205ENST00000506426 HIST1H2BOP23527 126 aa1.5□□□□□ -2.17
TRAPPC11-205ENST00000506426 HIST1H2BBP33778 126 aa1.5□□□□□ -2.17
TRAPPC11-205ENST00000506426 RPL28P46779 137 aaKnown RBP1.5□□□□□ -2.17
TRAPPC11-205ENST00000506426 ATP5G3P48201 142 aa1.5□□□□□ -2.17
TRAPPC11-205ENST00000506426 HIST1H2BDP58876 126 aa1.5□□□□□ -2.17
TRAPPC11-205ENST00000506426 RPS20P60866 119 aaKnown RBP1.5□□□□□ -2.17
TRAPPC11-205ENST00000506426 RAB14P61106 215 aa1.5□□□□□ -2.17
TRAPPC11-205ENST00000506426 YPEL3P61236 119 aaPredicted RBP1.5□□□□□ -2.17
TRAPPC11-205ENST00000506426 HIST1H2BCP62807 126 aa1.5□□□□□ -2.17
TRAPPC11-205ENST00000506426 SUPT4H1P63272 117 aaKnown RBP1.5□□□□□ -2.17
TRAPPC11-205ENST00000506426 SPCS2Q15005 226 aa1.5□□□□□ -2.17
TRAPPC11-205ENST00000506426 HIST2H2BEQ16778 126 aa1.5□□□□□ -2.17
TRAPPC11-205ENST00000506426 NMSQ5H8A3 153 aa1.5□□□□□ -2.17
TRAPPC11-205ENST00000506426 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.5□□□□□ -2.17
TRAPPC11-205ENST00000506426 Q5VSD8 79 aa1.5□□□□□ -2.17
TRAPPC11-205ENST00000506426 TMED4Q7Z7H5 227 aa1.5□□□□□ -2.17
TRAPPC11-205ENST00000506426 OR8I2Q8N0Y5 310 aa1.5□□□□□ -2.17
TRAPPC11-205ENST00000506426 MCFD2Q8NI22 146 aa1.5□□□□□ -2.17
TRAPPC11-205ENST00000506426 HIST1H2BHQ93079 126 aa1.5□□□□□ -2.17
TRAPPC11-205ENST00000506426 HIST1H2BNQ99877 126 aa1.5□□□□□ -2.17
TRAPPC11-205ENST00000506426 HIST1H2BMQ99879 126 aa1.5□□□□□ -2.17
TRAPPC11-205ENST00000506426 MIXL1Q9H2W2 232 aa1.5□□□□□ -2.17
TRAPPC11-205ENST00000506426 Q9H521 79 aa1.5□□□□□ -2.17
TRAPPC11-205ENST00000506426 NOP10Q9NPE3 64 aaKnown RBP1.5□□□□□ -2.17
TRAPPC11-205ENST00000506426 NAT8Q9UHE5 227 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms