RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 FAM231BA6NCW3 169 aa5.12□□□□□ -1.59
SNF8-204ENST00000506104 RPL18AQ02543 176 aaKnown RBP5.12□□□□□ -1.59
SNF8-204ENST00000506104 FOXI1Q12951 378 aa5.12□□□□□ -1.59
SNF8-204ENST00000506104 OR5A1Q8NGJ0 315 aa5.12□□□□□ -1.59
SNF8-204ENST00000506104 BIN3Q9NQY0 253 aa5.12□□□□□ -1.59
SNF8-204ENST00000506104 LOC107984640A0A0U1RRK4 108 aa5.11□□□□□ -1.59
SNF8-204ENST00000506104 LINC00959A0A1B0GUT2 108 aa5.11□□□□□ -1.59
SNF8-204ENST00000506104 C19orf71A6NCJ1 209 aa5.11□□□□□ -1.59
SNF8-204ENST00000506104 G3V3Q6 166 aa5.11□□□□□ -1.59
SNF8-204ENST00000506104 TEX46H3BTG2 121 aa5.11□□□□□ -1.59
SNF8-204ENST00000506104 BCL2L11O43521 198 aa5.11□□□□□ -1.59
SNF8-204ENST00000506104 BCL2P10415 239 aa5.11□□□□□ -1.59
SNF8-204ENST00000506104 FOXA3P55318 350 aaPredicted RBP5.11□□□□□ -1.59
SNF8-204ENST00000506104 KRTAP10-8P60410 259 aa5.11□□□□□ -1.59
SNF8-204ENST00000506104 EIF5AP63241 154 aaKnown RBP5.11□□□□□ -1.59
SNF8-204ENST00000506104 C1orf137Q5JT78 98 aa5.11□□□□□ -1.59
SNF8-204ENST00000506104 ISOC2Q96AB3 205 aa5.11□□□□□ -1.59
SNF8-204ENST00000506104 CTDSP1Q9GZU7 261 aa5.11□□□□□ -1.59
SNF8-204ENST00000506104 TMEM242Q9NWH2 141 aa5.11□□□□□ -1.59
SNF8-204ENST00000506104 SDHAF1A6NFY7 115 aa5.1□□□□□ -1.59
SNF8-204ENST00000506104 I3L3M4 83 aa5.1□□□□□ -1.59
SNF8-204ENST00000506104 NCR2O95944 276 aa5.1□□□□□ -1.59
SNF8-204ENST00000506104 CAMPP49913 170 aa5.1□□□□□ -1.59
SNF8-204ENST00000506104 EIF5AL1Q6IS14 154 aaKnown RBP5.1□□□□□ -1.59
SNF8-204ENST00000506104 C11orf52Q96A22 123 aa5.1□□□□□ -1.59
SNF8-204ENST00000506104 CAMK2N2Q96S95 79 aa5.1□□□□□ -1.59
SNF8-204ENST00000506104 KRTAP4-8Q9BYQ9 185 aa5.1□□□□□ -1.59
SNF8-204ENST00000506104 RNASE7Q9H1E1 156 aaKnown RBP5.1□□□□□ -1.59
SNF8-204ENST00000506104 RPP21Q9H633 154 aaKnown RBP5.1□□□□□ -1.59
SNF8-204ENST00000506104 IGLV4-69A0A075B6H9 119 aa5.09□□□□□ -1.59
SNF8-204ENST00000506104 ZNF25P17030 456 aaPredicted RBP5.09□□□□□ -1.59
SNF8-204ENST00000506104 CEBPGP53567 150 aa5.09□□□□□ -1.59
SNF8-204ENST00000506104 SUMO2P61956 95 aaKnown RBP5.09□□□□□ -1.59
SNF8-204ENST00000506104 MEF2BQ02080 365 aaPredicted RBP5.09□□□□□ -1.59
SNF8-204ENST00000506104 RNF151Q2KHN1 245 aa5.09□□□□□ -1.59
SNF8-204ENST00000506104 RNASE13Q5GAN3 156 aaKnown RBP5.09□□□□□ -1.59
SNF8-204ENST00000506104 PHF5AQ7RTV0 110 aaKnown RBP5.09□□□□□ -1.59
SNF8-204ENST00000506104 BORCS7Q96B45 105 aa5.09□□□□□ -1.59
SNF8-204ENST00000506104 MRAP2Q96G30 205 aa5.09□□□□□ -1.59
SNF8-204ENST00000506104 ST20Q9HBF5 79 aa5.09□□□□□ -1.59
SNF8-204ENST00000506104 LRP2P98164 4655 aa5.09□□□□□ -1.6
SNF8-204ENST00000506104 A0A1W2PNN7 141 aa5.08□□□□□ -1.6
SNF8-204ENST00000506104 H7C423 109 aa5.08□□□□□ -1.6
SNF8-204ENST00000506104 GATCO43716 136 aaKnown RBP5.08□□□□□ -1.6
SNF8-204ENST00000506104 PDE6DO43924 150 aa5.08□□□□□ -1.6
SNF8-204ENST00000506104 CTRLP40313 264 aa5.08□□□□□ -1.6
SNF8-204ENST00000506104 SRSF9Q13242 221 aaKnown RBP eCLIP5.08□□□□□ -1.6
SNF8-204ENST00000506104 ZNF345Q14585 488 aa5.08□□□□□ -1.6
SNF8-204ENST00000506104 PRR4Q16378 134 aa5.08□□□□□ -1.6
SNF8-204ENST00000506104 RGS21Q2M5E4 152 aa5.08□□□□□ -1.6
SNF8-204ENST00000506104 C9orf116Q5BN46 136 aaPredicted RBP5.08□□□□□ -1.6
SNF8-204ENST00000506104 C9orf62Q8N4C0 152 aa5.08□□□□□ -1.6
SNF8-204ENST00000506104 PRR26Q8N8Z3 221 aa5.08□□□□□ -1.6
SNF8-204ENST00000506104 OPRPNQ99935 248 aaPredicted RBP5.08□□□□□ -1.6
SNF8-204ENST00000506104 PSORS1C2Q9UIG4 136 aa5.08□□□□□ -1.6
SNF8-204ENST00000506104 TRBV20OR9-2A0A075B6H5 130 aa5.07□□□□□ -1.6
SNF8-204ENST00000506104 A0A087WZ39 114 aa5.07□□□□□ -1.6
SNF8-204ENST00000506104 TRAV13-1A0A0B4J241 112 aa5.07□□□□□ -1.6
SNF8-204ENST00000506104 COX7A2LO14548 114 aa5.07□□□□□ -1.6
SNF8-204ENST00000506104 FCER1GP30273 86 aa5.07□□□□□ -1.6
SNF8-204ENST00000506104 TEX261Q6UWH6 196 aa5.07□□□□□ -1.6
SNF8-204ENST00000506104 CD164L2Q6UWJ8 174 aa5.07□□□□□ -1.6
SNF8-204ENST00000506104 C5orf38Q86SI9 138 aa5.07□□□□□ -1.6
SNF8-204ENST00000506104 ZNF664Q8N3J9 261 aa5.07□□□□□ -1.6
SNF8-204ENST00000506104 C7orf77A4D0Y5 90 aa5.06□□□□□ -1.6
SNF8-204ENST00000506104 TSHBP01222 138 aa5.06□□□□□ -1.6
SNF8-204ENST00000506104 UBE2D1P51668 147 aa5.06□□□□□ -1.6
SNF8-204ENST00000506104 OCC1Q8TAD7 63 aa5.06□□□□□ -1.6
SNF8-204ENST00000506104 SMIM12Q96EX1 92 aa5.06□□□□□ -1.6
SNF8-204ENST00000506104 C1orf196B1AJZ1 125 aa5.05□□□□□ -1.6
SNF8-204ENST00000506104 K7EN84 100 aa5.05□□□□□ -1.6
SNF8-204ENST00000506104 APOMO95445 188 aa5.05□□□□□ -1.6
SNF8-204ENST00000506104 SPAG11BQ08648 103 aa5.05□□□□□ -1.6
SNF8-204ENST00000506104 FAM19A5Q7Z5A7 132 aaPredicted RBP5.05□□□□□ -1.6
SNF8-204ENST00000506104 NUP35Q8NFH5 326 aa5.05□□□□□ -1.6
SNF8-204ENST00000506104 DIRC1Q969H9 104 aa5.05□□□□□ -1.6
SNF8-204ENST00000506104 CDC42SE2Q9NRR3 84 aa5.05□□□□□ -1.6
SNF8-204ENST00000506104 TRAV1-1A0A0B4J248 108 aa5.04□□□□□ -1.6
SNF8-204ENST00000506104 HMSDA8MTL9 139 aa5.04□□□□□ -1.6
SNF8-204ENST00000506104 A8MWL6 223 aa5.04□□□□□ -1.6
SNF8-204ENST00000506104 SMKR1H3BMG3 65 aa5.04□□□□□ -1.6
SNF8-204ENST00000506104 UBE2BP63146 152 aa5.04□□□□□ -1.6
SNF8-204ENST00000506104 SMAGPQ0VAQ4 97 aa5.04□□□□□ -1.6
SNF8-204ENST00000506104 GAGE2EQ4V326 116 aa5.04□□□□□ -1.6
SNF8-204ENST00000506104 BATF3Q9NR55 127 aa5.04□□□□□ -1.6
SNF8-204ENST00000506104 GAGE2DQ9UEU5 116 aa5.04□□□□□ -1.6
SNF8-204ENST00000506104 TNXBP22105 4242 aa5.04□□□□□ -1.6
SNF8-204ENST00000506104 FAM168BA1KXE4 195 aa5.03□□□□□ -1.6
SNF8-204ENST00000506104 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.03□□□□□ -1.6
SNF8-204ENST00000506104 IGLV7-43P04211 117 aa5.03□□□□□ -1.6
SNF8-204ENST00000506104 ESDP10768 282 aa5.03□□□□□ -1.6
SNF8-204ENST00000506104 ORAOV1Q8WV07 137 aa5.03□□□□□ -1.6
SNF8-204ENST00000506104 TSPAN13O95857 204 aa5.02□□□□□ -1.61
SNF8-204ENST00000506104 Q6ZUT4 128 aa5.02□□□□□ -1.61
SNF8-204ENST00000506104 MRPL52Q86TS9 123 aaKnown RBP5.02□□□□□ -1.61
SNF8-204ENST00000506104 AMN1Q8IY45 258 aa5.02□□□□□ -1.61
SNF8-204ENST00000506104 KIR2DL4Q99706 377 aa5.02□□□□□ -1.61
SNF8-204ENST00000506104 CNFNQ9BYD5 112 aa5.02□□□□□ -1.61
SNF8-204ENST00000506104 TRBV6-5A0A0K0K1A5 114 aa5.01□□□□□ -1.61
SNF8-204ENST00000506104 A0A1B0GUT8 65 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms