RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 S100A12P80511 92 aa3.39□□□□□ -1.87
DEPDC1B-203ENST00000505017 LAGE3Q14657 143 aa3.39□□□□□ -1.87
DEPDC1B-203ENST00000505017 ZNF56Q15929 161 aa3.39□□□□□ -1.87
DEPDC1B-203ENST00000505017 PMCHL1Q16048 86 aa3.39□□□□□ -1.87
DEPDC1B-203ENST00000505017 CFAP126Q5VTH2 177 aa3.39□□□□□ -1.87
DEPDC1B-203ENST00000505017 UFSP1Q6NVU6 142 aa3.39□□□□□ -1.87
DEPDC1B-203ENST00000505017 PET117Q6UWS5 81 aa3.39□□□□□ -1.87
DEPDC1B-203ENST00000505017 SPATA12Q7Z6I5 190 aa3.39□□□□□ -1.87
DEPDC1B-203ENST00000505017 C18orf15Q96N68 181 aa3.39□□□□□ -1.87
DEPDC1B-203ENST00000505017 MAP1LC3CQ9BXW4 147 aa3.39□□□□□ -1.87
DEPDC1B-203ENST00000505017 WFDC10AQ9H1F0 79 aa3.39□□□□□ -1.87
DEPDC1B-203ENST00000505017 NIT2Q9NQR4 276 aa3.39□□□□□ -1.87
DEPDC1B-203ENST00000505017 STAB1Q9NY15 2570 aa3.39□□□□□ -1.87
DEPDC1B-203ENST00000505017 COL6A5A8TX70 2615 aa3.39□□□□□ -1.87
DEPDC1B-203ENST00000505017 VWFP04275 2813 aa3.38□□□□□ -1.87
DEPDC1B-203ENST00000505017 IGHV3OR16-12A0A075B7B8 117 aa3.38□□□□□ -1.87
DEPDC1B-203ENST00000505017 TRAV26-2A0A0B4J265 109 aa3.38□□□□□ -1.87
DEPDC1B-203ENST00000505017 TRBV10-1A0A0K0K1A3 114 aa3.38□□□□□ -1.87
DEPDC1B-203ENST00000505017 TEX48A0A1B0GUV7 120 aa3.38□□□□□ -1.87
DEPDC1B-203ENST00000505017 LYRM9A8MSI8 78 aa3.38□□□□□ -1.87
DEPDC1B-203ENST00000505017 ATP5LO75964 103 aa3.38□□□□□ -1.87
DEPDC1B-203ENST00000505017 IGHV3-53P01767 116 aa3.38□□□□□ -1.87
DEPDC1B-203ENST00000505017 RHOHQ15669 191 aa3.38□□□□□ -1.87
DEPDC1B-203ENST00000505017 FAM74A4Q5TZK3 123 aa3.38□□□□□ -1.87
DEPDC1B-203ENST00000505017 FAM19A2Q8N3H0 131 aa3.38□□□□□ -1.87
DEPDC1B-203ENST00000505017 OR4C5Q8NGB2 326 aa3.38□□□□□ -1.87
DEPDC1B-203ENST00000505017 KIR2DL4Q99706 377 aa3.38□□□□□ -1.87
DEPDC1B-203ENST00000505017 TMEM70Q9BUB7 260 aa3.38□□□□□ -1.87
DEPDC1B-203ENST00000505017 JPT2Q9H910 190 aa3.38□□□□□ -1.87
DEPDC1B-203ENST00000505017 TP53TG1Q9Y2A0 90 aa3.38□□□□□ -1.87
DEPDC1B-203ENST00000505017 A0A096LNJ9 63 aa3.37□□□□□ -1.87
DEPDC1B-203ENST00000505017 TRGV1A0A0A0MS02 117 aa3.37□□□□□ -1.87
DEPDC1B-203ENST00000505017 PLAC8L1A1L4L8 177 aa3.37□□□□□ -1.87
DEPDC1B-203ENST00000505017 SDHAF1A6NFY7 115 aa3.37□□□□□ -1.87
DEPDC1B-203ENST00000505017 SYS1-DBNDD2H3BUS1 97 aa3.37□□□□□ -1.87
DEPDC1B-203ENST00000505017 C3orf79P0CE67 100 aa3.37□□□□□ -1.87
DEPDC1B-203ENST00000505017 MIFP14174 115 aa3.37□□□□□ -1.87
DEPDC1B-203ENST00000505017 RIPPLY3P57055 190 aa3.37□□□□□ -1.87
DEPDC1B-203ENST00000505017 KRTDAPP60985 99 aa3.37□□□□□ -1.87
DEPDC1B-203ENST00000505017 TEX43Q6ZNM6 134 aa3.37□□□□□ -1.87
DEPDC1B-203ENST00000505017 RPL39LQ96EH5 51 aaKnown RBP3.37□□□□□ -1.87
DEPDC1B-203ENST00000505017 Q9H8V8 135 aa3.37□□□□□ -1.87
DEPDC1B-203ENST00000505017 NOP10Q9NPE3 64 aaKnown RBP3.37□□□□□ -1.87
DEPDC1B-203ENST00000505017 MRPL16Q9NX20 251 aaKnown RBP3.37□□□□□ -1.87
DEPDC1B-203ENST00000505017 CELA1Q9UNI1 258 aa3.37□□□□□ -1.87
DEPDC1B-203ENST00000505017 TRRAPQ9Y4A5 3859 aa3.37□□□□□ -1.87
DEPDC1B-203ENST00000505017 TRBV6-4A0A1B0GX49 114 aa3.36□□□□□ -1.87
DEPDC1B-203ENST00000505017 TSTD3H0UI37 97 aa3.36□□□□□ -1.87
DEPDC1B-203ENST00000505017 I3L3M4 83 aa3.36□□□□□ -1.87
DEPDC1B-203ENST00000505017 K7EQD1 137 aa3.36□□□□□ -1.87
DEPDC1B-203ENST00000505017 SMAGPQ0VAQ4 97 aa3.36□□□□□ -1.87
DEPDC1B-203ENST00000505017 LINC01545Q5VT33 79 aa3.36□□□□□ -1.87
DEPDC1B-203ENST00000505017 LGALS9CQ6DKI2 356 aa3.36□□□□□ -1.87
DEPDC1B-203ENST00000505017 Q6ZTI0 123 aa3.36□□□□□ -1.87
DEPDC1B-203ENST00000505017 TOMM6Q96B49 74 aa3.36□□□□□ -1.87
DEPDC1B-203ENST00000505017 IFI27L1Q96BM0 104 aa3.36□□□□□ -1.87
DEPDC1B-203ENST00000505017 VAMP8Q9BV40 100 aa3.36□□□□□ -1.87
DEPDC1B-203ENST00000505017 CYSLTR1Q9Y271 337 aa3.36□□□□□ -1.87
DEPDC1B-203ENST00000505017 ANK2Q01484 3957 aa3.36□□□□□ -1.87
DEPDC1B-203ENST00000505017 CMYA5Q8N3K9 4069 aa3.36□□□□□ -1.87
DEPDC1B-203ENST00000505017 FBN1P35555 2871 aaKnown RBP3.35□□□□□ -1.87
DEPDC1B-203ENST00000505017 DNAH3Q8TD57 4116 aa3.35□□□□□ -1.87
DEPDC1B-203ENST00000505017 TRBV7-3A0A075B6L6 115 aa3.35□□□□□ -1.87
DEPDC1B-203ENST00000505017 TRGV2A0A075B6R0 118 aa3.35□□□□□ -1.87
DEPDC1B-203ENST00000505017 TRAV12-1A0A0B4J245 112 aa3.35□□□□□ -1.87
DEPDC1B-203ENST00000505017 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.35□□□□□ -1.87
DEPDC1B-203ENST00000505017 PRM2P04554 102 aa3.35□□□□□ -1.87
DEPDC1B-203ENST00000505017 CRYBA4P53673 196 aa3.35□□□□□ -1.87
DEPDC1B-203ENST00000505017 PKIAP61925 76 aa3.35□□□□□ -1.87
DEPDC1B-203ENST00000505017 DEFB135Q30KP9 77 aa3.35□□□□□ -1.87
DEPDC1B-203ENST00000505017 TMEM97Q5BJF2 176 aa3.35□□□□□ -1.87
DEPDC1B-203ENST00000505017 KPRPQ5T749 579 aaPredicted RBP3.35□□□□□ -1.87
DEPDC1B-203ENST00000505017 LCE1CQ5T751 118 aa3.35□□□□□ -1.87
DEPDC1B-203ENST00000505017 LCE1BQ5T7P3 118 aa3.35□□□□□ -1.87
DEPDC1B-203ENST00000505017 C2orf66Q6UXQ4 117 aa3.35□□□□□ -1.87
DEPDC1B-203ENST00000505017 ERASQ7Z444 233 aa3.35□□□□□ -1.87
DEPDC1B-203ENST00000505017 DAZ4Q86SG3 579 aaKnown RBP3.35□□□□□ -1.87
DEPDC1B-203ENST00000505017 Q8N976 141 aa3.35□□□□□ -1.87
DEPDC1B-203ENST00000505017 OR11H2Q8NH07 326 aa3.35□□□□□ -1.87
DEPDC1B-203ENST00000505017 TMEM141Q96I45 108 aa3.35□□□□□ -1.87
DEPDC1B-203ENST00000505017 TIMM17AQ99595 171 aa3.35□□□□□ -1.87
DEPDC1B-203ENST00000505017 PRADC1Q9BSG0 188 aa3.35□□□□□ -1.87
DEPDC1B-203ENST00000505017 DAZ3Q9NR90 486 aaKnown RBP3.35□□□□□ -1.87
DEPDC1B-203ENST00000505017 TRAV9-2A0A087WT02 112 aa3.34□□□□□ -1.87
DEPDC1B-203ENST00000505017 TRGV4A0A0C4DH28 118 aa3.34□□□□□ -1.87
DEPDC1B-203ENST00000505017 HSBP1L1C9JCN9 74 aa3.34□□□□□ -1.87
DEPDC1B-203ENST00000505017 SPART-AS1P0CW21 52 aa3.34□□□□□ -1.87
DEPDC1B-203ENST00000505017 COTL1Q14019 142 aa3.34□□□□□ -1.87
DEPDC1B-203ENST00000505017 Q6ZN92 141 aa3.34□□□□□ -1.87
DEPDC1B-203ENST00000505017 LINC00173Q6ZV60 143 aa3.34□□□□□ -1.87
DEPDC1B-203ENST00000505017 Q8NAQ8 132 aa3.34□□□□□ -1.87
DEPDC1B-203ENST00000505017 C20orf203Q8NBC4 194 aa3.34□□□□□ -1.87
DEPDC1B-203ENST00000505017 SCGB3A1Q96QR1 104 aa3.34□□□□□ -1.87
DEPDC1B-203ENST00000505017 TIMM21Q9BVV7 248 aa3.34□□□□□ -1.87
DEPDC1B-203ENST00000505017 C11orf68Q9H3H3 251 aaKnown RBP3.34□□□□□ -1.87
DEPDC1B-203ENST00000505017 SPANXA1Q9NS26 97 aa3.34□□□□□ -1.87
DEPDC1B-203ENST00000505017 A0A087WX48 190 aa3.33□□□□□ -1.88
DEPDC1B-203ENST00000505017 IGHV3-73A0A0B4J1V6 119 aa3.33□□□□□ -1.88
DEPDC1B-203ENST00000505017 IGIPA6NJ69 53 aa3.33□□□□□ -1.88
DEPDC1B-203ENST00000505017 F8VRH5 84 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms