RNA–Protein interactions for RNA: ENST00000504047.1

ATXN3-208, Transcript of ataxin 3, humanhuman

TSL 3

Gene ATXN3, Length 426 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-208ENST00000504047 DEFB108AA8MXU0 73 aa1.32□□□□□ -2.2
ATXN3-208ENST00000504047 IQCF6A8MYZ5 107 aa1.32□□□□□ -2.2
ATXN3-208ENST00000504047 C10orf142B7Z368 130 aa1.32□□□□□ -2.2
ATXN3-208ENST00000504047 H3BRN7 92 aa1.32□□□□□ -2.2
ATXN3-208ENST00000504047 K7EMT4 169 aa1.32□□□□□ -2.2
ATXN3-208ENST00000504047 M0R381 172 aa1.32□□□□□ -2.2
ATXN3-208ENST00000504047 COX6CP09669 75 aa1.32□□□□□ -2.2
ATXN3-208ENST00000504047 SAA1P0DJI8 122 aaPredicted RBP1.32□□□□□ -2.2
ATXN3-208ENST00000504047 SAA2P0DJI9 122 aaPredicted RBP1.32□□□□□ -2.2
ATXN3-208ENST00000504047 CGB3P0DN86 165 aa1.32□□□□□ -2.2
ATXN3-208ENST00000504047 CGB7P0DN87 165 aa1.32□□□□□ -2.2
ATXN3-208ENST00000504047 FAM236CP0DP71 79 aa1.32□□□□□ -2.2
ATXN3-208ENST00000504047 ZNF22P17026 224 aaPredicted RBP1.32□□□□□ -2.2
ATXN3-208ENST00000504047 TSPEAR-AS2P59090 65 aa1.32□□□□□ -2.2
ATXN3-208ENST00000504047 MRPS36P82909 103 aaKnown RBP1.32□□□□□ -2.2
ATXN3-208ENST00000504047 C1orf195Q5TG92 126 aa1.32□□□□□ -2.2
ATXN3-208ENST00000504047 Q6JHZ5 121 aa1.32□□□□□ -2.2
ATXN3-208ENST00000504047 HCP5Q6MZN7 132 aa1.32□□□□□ -2.2
ATXN3-208ENST00000504047 Q6ZT83 130 aa1.32□□□□□ -2.2
ATXN3-208ENST00000504047 ADM2Q7Z4H4 148 aa1.32□□□□□ -2.2
ATXN3-208ENST00000504047 C1orf158Q8N1D5 194 aa1.32□□□□□ -2.2
ATXN3-208ENST00000504047 EXOC3-AS1Q8N2X6 119 aa1.32□□□□□ -2.2
ATXN3-208ENST00000504047 SLC25A45Q8N413 288 aa1.32□□□□□ -2.2
ATXN3-208ENST00000504047 TMEM167AQ8TBQ9 72 aa1.32□□□□□ -2.2
ATXN3-208ENST00000504047 DCANP1Q8TF63 244 aa1.32□□□□□ -2.2
ATXN3-208ENST00000504047 COPS9Q8WXC6 57 aa1.32□□□□□ -2.2
ATXN3-208ENST00000504047 SCGB3A1Q96QR1 104 aa1.32□□□□□ -2.2
ATXN3-208ENST00000504047 SLC50A1Q9BRV3 221 aa1.32□□□□□ -2.2
ATXN3-208ENST00000504047 DPH3P1Q9H4G8 78 aa1.32□□□□□ -2.2
ATXN3-208ENST00000504047 C16orf95Q9H693 158 aa1.32□□□□□ -2.2
ATXN3-208ENST00000504047 MRPL36Q9P0J6 103 aaKnown RBP1.32□□□□□ -2.2
ATXN3-208ENST00000504047 RPUSD1Q9UJJ7 312 aaKnown RBP1.32□□□□□ -2.2
ATXN3-208ENST00000504047 TP53TG1Q9Y2A0 90 aa1.32□□□□□ -2.2
ATXN3-208ENST00000504047 PKIGQ9Y2B9 76 aa1.32□□□□□ -2.2
ATXN3-208ENST00000504047 USF3Q68DE3 2245 aa1.32□□□□□ -2.2
ATXN3-208ENST00000504047 TANC2Q9HCD6 1990 aa1.32□□□□□ -2.2
ATXN3-208ENST00000504047 DYSFO75923 2080 aa1.31□□□□□ -2.2
ATXN3-208ENST00000504047 TRGV5A0A0B4J1U4 118 aa1.31□□□□□ -2.2
ATXN3-208ENST00000504047 KNCNA6PVL3 124 aa1.31□□□□□ -2.2
ATXN3-208ENST00000504047 H7C2G1 150 aa1.31□□□□□ -2.2
ATXN3-208ENST00000504047 M0R3E3 92 aa1.31□□□□□ -2.2
ATXN3-208ENST00000504047 LEPROTO15243 131 aa1.31□□□□□ -2.2
ATXN3-208ENST00000504047 ENSAO43768 121 aaKnown RBP1.31□□□□□ -2.2
ATXN3-208ENST00000504047 MRPL33O75394 65 aaKnown RBP1.31□□□□□ -2.2
ATXN3-208ENST00000504047 PPP1R17O96001 155 aa1.31□□□□□ -2.2
ATXN3-208ENST00000504047 IGHG2P01859 326 aa1.31□□□□□ -2.2
ATXN3-208ENST00000504047 TRGV3P03979 118 aa1.31□□□□□ -2.2
ATXN3-208ENST00000504047 IGKV1-16P04430 117 aa1.31□□□□□ -2.2
ATXN3-208ENST00000504047 INAFM2P0DMQ5 153 aa1.31□□□□□ -2.2
ATXN3-208ENST00000504047 CCL3P10147 92 aa1.31□□□□□ -2.2
ATXN3-208ENST00000504047 ATP5EP56381 51 aaPredicted RBP1.31□□□□□ -2.2
ATXN3-208ENST00000504047 WT1-ASQ06250 92 aa1.31□□□□□ -2.2
ATXN3-208ENST00000504047 VMA21Q3ZAQ7 101 aa1.31□□□□□ -2.2
ATXN3-208ENST00000504047 ATP5EP2Q5VTU8 51 aa1.31□□□□□ -2.2
ATXN3-208ENST00000504047 ZNF833PQ6ZTB9 187 aa1.31□□□□□ -2.2
ATXN3-208ENST00000504047 APRG1Q8IVJ8 170 aa1.31□□□□□ -2.2
ATXN3-208ENST00000504047 MUSTN1Q8IVN3 82 aa1.31□□□□□ -2.2
ATXN3-208ENST00000504047 LINC00311Q8N616 119 aa1.31□□□□□ -2.2
ATXN3-208ENST00000504047 C10orf105Q8TEF2 133 aa1.31□□□□□ -2.2
ATXN3-208ENST00000504047 TMEM141Q96I45 108 aa1.31□□□□□ -2.2
ATXN3-208ENST00000504047 TIMM21Q9BVV7 248 aa1.31□□□□□ -2.2
ATXN3-208ENST00000504047 LINC00574Q9H8X3 128 aa1.31□□□□□ -2.2
ATXN3-208ENST00000504047 FBN1P35555 2871 aaKnown RBP1.31□□□□□ -2.2
ATXN3-208ENST00000504047 TET1Q8NFU7 2136 aa1.31□□□□□ -2.2
ATXN3-208ENST00000504047 HEATR1Q9H583 2144 aaKnown RBP1.31□□□□□ -2.2
ATXN3-208ENST00000504047 MYO9BQ13459 2157 aa1.31□□□□□ -2.2
ATXN3-208ENST00000504047 PRRC2BQ5JSZ5 2229 aaKnown RBP1.31□□□□□ -2.2
ATXN3-208ENST00000504047 UNC13CQ8NB66 2214 aa1.31□□□□□ -2.2
ATXN3-208ENST00000504047 ZNF407Q9C0G0 2248 aa1.31□□□□□ -2.2
ATXN3-208ENST00000504047 EP400Q96L91 3159 aa1.3□□□□□ -2.2
ATXN3-208ENST00000504047 IGKV2-40A0A087WW87 121 aaPredicted RBP1.3□□□□□ -2.2
ATXN3-208ENST00000504047 TRAV26-2A0A0B4J265 109 aa1.3□□□□□ -2.2
ATXN3-208ENST00000504047 IGIPA6NJ69 53 aa1.3□□□□□ -2.2
ATXN3-208ENST00000504047 E7EUB6 86 aa1.3□□□□□ -2.2
ATXN3-208ENST00000504047 I3L2K1 104 aa1.3□□□□□ -2.2
ATXN3-208ENST00000504047 I3L3M4 83 aa1.3□□□□□ -2.2
ATXN3-208ENST00000504047 BCE1O60756 84 aa1.3□□□□□ -2.2
ATXN3-208ENST00000504047 TIMM17BO60830 172 aa1.3□□□□□ -2.2
ATXN3-208ENST00000504047 IGKV2D-40P01614 121 aaPredicted RBP1.3□□□□□ -2.2
ATXN3-208ENST00000504047 IGHV1-69P01742 117 aa1.3□□□□□ -2.2
ATXN3-208ENST00000504047 TFF1P04155 84 aa1.3□□□□□ -2.2
ATXN3-208ENST00000504047 NBL1P41271 181 aa1.3□□□□□ -2.2
ATXN3-208ENST00000504047 RPL27AP46776 148 aaKnown RBP1.3□□□□□ -2.2
ATXN3-208ENST00000504047 ZNF80P51504 273 aaPredicted RBP1.3□□□□□ -2.2
ATXN3-208ENST00000504047 DEFB103AP81534 67 aa1.3□□□□□ -2.2
ATXN3-208ENST00000504047 MIAQ16674 131 aa1.3□□□□□ -2.2
ATXN3-208ENST00000504047 KRTAP6-3Q3LI67 103 aa1.3□□□□□ -2.2
ATXN3-208ENST00000504047 LUZP6Q538Z0 58 aa1.3□□□□□ -2.2
ATXN3-208ENST00000504047 C10orf55Q5SWW7 151 aa1.3□□□□□ -2.2
ATXN3-208ENST00000504047 ZNF826PQ6ZT77 177 aa1.3□□□□□ -2.2
ATXN3-208ENST00000504047 FAM19A1Q7Z5A9 133 aa1.3□□□□□ -2.2
ATXN3-208ENST00000504047 DAZ4Q86SG3 579 aaKnown RBP1.3□□□□□ -2.2
ATXN3-208ENST00000504047 DYNAPQ8N1N2 210 aa1.3□□□□□ -2.2
ATXN3-208ENST00000504047 CLEC2BQ92478 149 aa1.3□□□□□ -2.2
ATXN3-208ENST00000504047 LEAP2Q969E1 77 aa1.3□□□□□ -2.2
ATXN3-208ENST00000504047 DAZ1Q9NQZ3 744 aaKnown RBP1.3□□□□□ -2.2
ATXN3-208ENST00000504047 UBE2D4Q9Y2X8 147 aa1.3□□□□□ -2.2
ATXN3-208ENST00000504047 SEC16AO15027 2179 aa1.3□□□□□ -2.2
ATXN3-208ENST00000504047 TRAV8-3A0A0A6YYJ7 113 aa1.29□□□□□ -2.2
ATXN3-208ENST00000504047 IGHV1-18A0A0C4DH31 117 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms