RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 HIST2H2BDQ6DRA6 164 aa2.07□□□□□ -2.08
NEDD4-204ENST00000503468 HRCT1Q6UXD1 115 aa2.07□□□□□ -2.08
NEDD4-204ENST00000503468 C1orf158Q8N1D5 194 aa2.07□□□□□ -2.08
NEDD4-204ENST00000503468 BEX4Q9NWD9 120 aaPredicted RBP2.07□□□□□ -2.08
NEDD4-204ENST00000503468 DMDP11532 3685 aa2.07□□□□□ -2.08
NEDD4-204ENST00000503468 TRAV8-3A0A0A6YYJ7 113 aa2.07□□□□□ -2.08
NEDD4-204ENST00000503468 A0A0U1RQV1 116 aa2.07□□□□□ -2.08
NEDD4-204ENST00000503468 BAALC-AS2P0C853 105 aa2.07□□□□□ -2.08
NEDD4-204ENST00000503468 MUSTN1Q8IVN3 82 aa2.07□□□□□ -2.08
NEDD4-204ENST00000503468 C11orf44Q8N8P7 122 aa2.07□□□□□ -2.08
NEDD4-204ENST00000503468 TRBV7-6A0A0J9YX20 115 aa2.07□□□□□ -2.08
NEDD4-204ENST00000503468 A0A1W2PRX2 142 aa2.07□□□□□ -2.08
NEDD4-204ENST00000503468 PINLYPA6NC86 204 aa2.07□□□□□ -2.08
NEDD4-204ENST00000503468 CRIP1P50238 77 aa2.07□□□□□ -2.08
NEDD4-204ENST00000503468 GUSBP11Q6P575 273 aa2.07□□□□□ -2.08
NEDD4-204ENST00000503468 ZNRF1Q8ND25 227 aa2.07□□□□□ -2.08
NEDD4-204ENST00000503468 DCANP1Q8TF63 244 aa2.07□□□□□ -2.08
NEDD4-204ENST00000503468 DSCR8Q96T75 97 aa2.07□□□□□ -2.08
NEDD4-204ENST00000503468 UBE2D4Q9Y2X8 147 aa2.07□□□□□ -2.08
NEDD4-204ENST00000503468 ADARB2-AS1A8MUL3 147 aa2.07□□□□□ -2.08
NEDD4-204ENST00000503468 SMKR1H3BMG3 65 aa2.07□□□□□ -2.08
NEDD4-204ENST00000503468 K7EIM0 57 aa2.07□□□□□ -2.08
NEDD4-204ENST00000503468 K7EMT4 169 aa2.07□□□□□ -2.08
NEDD4-204ENST00000503468 KLK10O43240 276 aa2.07□□□□□ -2.08
NEDD4-204ENST00000503468 RBM3P98179 157 aaKnown RBP2.07□□□□□ -2.08
NEDD4-204ENST00000503468 MLANAQ16655 118 aa2.07□□□□□ -2.08
NEDD4-204ENST00000503468 RSPO4Q2I0M5 234 aaPredicted RBP2.07□□□□□ -2.08
NEDD4-204ENST00000503468 GPHB5Q86YW7 130 aa2.07□□□□□ -2.08
NEDD4-204ENST00000503468 DCTN5Q9BTE1 182 aa2.07□□□□□ -2.08
NEDD4-204ENST00000503468 DAZ1Q9NQZ3 744 aaKnown RBP2.07□□□□□ -2.08
NEDD4-204ENST00000503468 FAM30AQ9NZY2 134 aa2.07□□□□□ -2.08
NEDD4-204ENST00000503468 H7C2G1 150 aa2.07□□□□□ -2.08
NEDD4-204ENST00000503468 ZNHIT1O43257 154 aa2.07□□□□□ -2.08
NEDD4-204ENST00000503468 IGHV4-39P01824 125 aa2.07□□□□□ -2.08
NEDD4-204ENST00000503468 LINC00315P59091 139 aa2.07□□□□□ -2.08
NEDD4-204ENST00000503468 MRPL55Q7Z7F7 128 aaKnown RBP2.07□□□□□ -2.08
NEDD4-204ENST00000503468 PLPPR2Q96GM1 343 aa2.07□□□□□ -2.08
NEDD4-204ENST00000503468 M0R1W7 72 aa2.06□□□□□ -2.08
NEDD4-204ENST00000503468 IGHV4-59P01825 116 aa2.06□□□□□ -2.08
NEDD4-204ENST00000503468 IGHV3-30-3P0DP02 117 aa2.06□□□□□ -2.08
NEDD4-204ENST00000503468 CD164Q04900 197 aa2.06□□□□□ -2.08
NEDD4-204ENST00000503468 C10orf55Q5SWW7 151 aa2.06□□□□□ -2.08
NEDD4-204ENST00000503468 MYCBP2O75592 4640 aa2.06□□□□□ -2.08
NEDD4-204ENST00000503468 C16orf97H3BN30 126 aa2.06□□□□□ -2.08
NEDD4-204ENST00000503468 C20orf197Q8N268 126 aa2.06□□□□□ -2.08
NEDD4-204ENST00000503468 KLHL30-AS1Q8NEE0 82 aa2.06□□□□□ -2.08
NEDD4-204ENST00000503468 CHCHD5Q9BSY4 110 aa2.06□□□□□ -2.08
NEDD4-204ENST00000503468 PKHD1L1Q86WI1 4243 aa2.06□□□□□ -2.08
NEDD4-204ENST00000503468 PKHD1P08F94 4074 aa2.06□□□□□ -2.08
NEDD4-204ENST00000503468 ENSAO43768 121 aaKnown RBP2.06□□□□□ -2.08
NEDD4-204ENST00000503468 RPL28P46779 137 aaKnown RBP2.06□□□□□ -2.08
NEDD4-204ENST00000503468 UBE2E1P51965 193 aa2.06□□□□□ -2.08
NEDD4-204ENST00000503468 C2orf48Q96LS8 159 aa2.06□□□□□ -2.08
NEDD4-204ENST00000503468 FANCD2OSQ96PS1 177 aa2.06□□□□□ -2.08
NEDD4-204ENST00000503468 F5H697 171 aa2.06□□□□□ -2.08
NEDD4-204ENST00000503468 I3L3M4 83 aa2.06□□□□□ -2.08
NEDD4-204ENST00000503468 MINOS1Q5TGZ0 78 aa2.06□□□□□ -2.08
NEDD4-204ENST00000503468 DAZ4Q86SG3 579 aaKnown RBP2.06□□□□□ -2.08
NEDD4-204ENST00000503468 DAZ3Q9NR90 486 aaKnown RBP2.06□□□□□ -2.08
NEDD4-204ENST00000503468 MINOS1-NBL1R4GNA1 71 aa2.06□□□□□ -2.08
NEDD4-204ENST00000503468 IGLV5-45A0A087WSX0 123 aa2.06□□□□□ -2.08
NEDD4-204ENST00000503468 F6UB75 175 aa2.06□□□□□ -2.08
NEDD4-204ENST00000503468 LYZL6O75951 148 aa2.06□□□□□ -2.08
NEDD4-204ENST00000503468 CCL4P13236 92 aa2.06□□□□□ -2.08
NEDD4-204ENST00000503468 MSRB1Q9NZV6 116 aa2.06□□□□□ -2.08
NEDD4-204ENST00000503468 MRPL36Q9P0J6 103 aaKnown RBP2.06□□□□□ -2.08
NEDD4-204ENST00000503468 IGLV11-55A0A075B6I3 123 aa2.05□□□□□ -2.08
NEDD4-204ENST00000503468 H3BTX0 84 aa2.05□□□□□ -2.08
NEDD4-204ENST00000503468 MAPK1IP1LQ8NDC0 245 aa2.05□□□□□ -2.08
NEDD4-204ENST00000503468 KRTAP3-3Q9BYR6 98 aa2.05□□□□□ -2.08
NEDD4-204ENST00000503468 KRTAP3-2Q9BYR7 98 aa2.05□□□□□ -2.08
NEDD4-204ENST00000503468 TTTY12Q9BZ98 90 aa2.05□□□□□ -2.08
NEDD4-204ENST00000503468 A0A087WZ39 114 aa2.05□□□□□ -2.08
NEDD4-204ENST00000503468 A0A1B0GW54 56 aa2.05□□□□□ -2.08
NEDD4-204ENST00000503468 DEFB108BQ8NET1 73 aa2.05□□□□□ -2.08
NEDD4-204ENST00000503468 HES7Q9BYE0 225 aa2.05□□□□□ -2.08
NEDD4-204ENST00000503468 HERC1Q15751 4861 aa2.05□□□□□ -2.08
NEDD4-204ENST00000503468 NDUFA1O15239 70 aa2.05□□□□□ -2.08
NEDD4-204ENST00000503468 RFPL3SP0C7P2 107 aa2.05□□□□□ -2.08
NEDD4-204ENST00000503468 IGHV1-8P0DP01 117 aa2.05□□□□□ -2.08
NEDD4-204ENST00000503468 CD24P25063 80 aa2.05□□□□□ -2.08
NEDD4-204ENST00000503468 GFRALQ6UXV0 394 aa2.05□□□□□ -2.08
NEDD4-204ENST00000503468 MGPP08493 103 aa2.05□□□□□ -2.08
NEDD4-204ENST00000503468 XCL1P47992 114 aa2.05□□□□□ -2.08
NEDD4-204ENST00000503468 LINC00336Q6ZUF6 198 aa2.05□□□□□ -2.08
NEDD4-204ENST00000503468 GAFA1Q96PS6 74 aa2.05□□□□□ -2.08
NEDD4-204ENST00000503468 ZFAND3Q9H8U3 227 aa2.05□□□□□ -2.08
NEDD4-204ENST00000503468 XCL2Q9UBD3 114 aa2.05□□□□□ -2.08
NEDD4-204ENST00000503468 A0A0J9YXV3 536 aa2.05□□□□□ -2.08
NEDD4-204ENST00000503468 TEX22C9J3V5 150 aa2.05□□□□□ -2.08
NEDD4-204ENST00000503468 RPL35AP18077 110 aaKnown RBP2.05□□□□□ -2.08
NEDD4-204ENST00000503468 CNEP1R1Q8N9A8 125 aa2.05□□□□□ -2.08
NEDD4-204ENST00000503468 FAM110DQ8TAY7 271 aaPredicted RBP2.05□□□□□ -2.08
NEDD4-204ENST00000503468 EEF1AKMT3Q96AZ1 226 aa2.05□□□□□ -2.08
NEDD4-204ENST00000503468 IGKV3D-20A0A0C4DH25 116 aa2.04□□□□□ -2.08
NEDD4-204ENST00000503468 CD28P10747 220 aa2.04□□□□□ -2.08
NEDD4-204ENST00000503468 DEFB114Q30KQ6 69 aa2.04□□□□□ -2.08
NEDD4-204ENST00000503468 C1orf229Q6ZS94 237 aaPredicted RBP2.04□□□□□ -2.08
NEDD4-204ENST00000503468 C14orf178Q8N769 122 aaPredicted RBP2.04□□□□□ -2.08
NEDD4-204ENST00000503468 AMELXQ99217 191 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms