RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 CD7P09564 240 aa3.47□□□□□ -1.85
NEDD4-203ENST00000502612 EVI2AP22794 236 aa3.47□□□□□ -1.85
NEDD4-203ENST00000502612 OR11H1Q8NG94 326 aa3.47□□□□□ -1.85
NEDD4-203ENST00000502612 SMIM2Q9BVW6 85 aa3.47□□□□□ -1.85
NEDD4-203ENST00000502612 NAV3Q8IVL0 2385 aa3.46□□□□□ -1.86
NEDD4-203ENST00000502612 ROS1P08922 2347 aa3.46□□□□□ -1.86
NEDD4-203ENST00000502612 PCNX1Q96RV3 2341 aa3.46□□□□□ -1.86
NEDD4-203ENST00000502612 TRAV12-1A0A0B4J245 112 aa3.46□□□□□ -1.86
NEDD4-203ENST00000502612 MUC21A0A0G2JKD1 596 aa3.46□□□□□ -1.86
NEDD4-203ENST00000502612 MUC21A0A140T8X8 626 aa3.46□□□□□ -1.86
NEDD4-203ENST00000502612 DLEU1O43261 78 aa3.46□□□□□ -1.86
NEDD4-203ENST00000502612 MGPP08493 103 aa3.46□□□□□ -1.86
NEDD4-203ENST00000502612 COX8AP10176 69 aa3.46□□□□□ -1.86
NEDD4-203ENST00000502612 HLA-DRB4P13762 266 aa3.46□□□□□ -1.86
NEDD4-203ENST00000502612 PLNP26678 52 aa3.46□□□□□ -1.86
NEDD4-203ENST00000502612 TMEM97Q5BJF2 176 aa3.46□□□□□ -1.86
NEDD4-203ENST00000502612 ATOH7Q8N100 152 aa3.46□□□□□ -1.86
NEDD4-203ENST00000502612 PTH2Q96A98 100 aa3.46□□□□□ -1.86
NEDD4-203ENST00000502612 LINC00467Q9BRT7 94 aa3.46□□□□□ -1.86
NEDD4-203ENST00000502612 SNHG12Q9BXW3 62 aa3.46□□□□□ -1.86
NEDD4-203ENST00000502612 C16orf95Q9H693 158 aa3.46□□□□□ -1.86
NEDD4-203ENST00000502612 HLA-DRB4X5D2U9 266 aa3.46□□□□□ -1.86
NEDD4-203ENST00000502612 LAMA5O15230 3695 aa3.46□□□□□ -1.86
NEDD4-203ENST00000502612 BOD1L1Q8NFC6 3051 aa3.46□□□□□ -1.86
NEDD4-203ENST00000502612 DMXL2Q8TDJ6 3036 aa3.46□□□□□ -1.86
NEDD4-203ENST00000502612 DSPP15924 2871 aaKnown RBP3.45□□□□□ -1.86
NEDD4-203ENST00000502612 TRAV12-3A0A0B4J271 114 aa3.45□□□□□ -1.86
NEDD4-203ENST00000502612 TRBV6-5A0A0K0K1A5 114 aa3.45□□□□□ -1.86
NEDD4-203ENST00000502612 A8MTW9 85 aa3.45□□□□□ -1.86
NEDD4-203ENST00000502612 A8MWV9 139 aa3.45□□□□□ -1.86
NEDD4-203ENST00000502612 GNRH2O43555 120 aa3.45□□□□□ -1.86
NEDD4-203ENST00000502612 DPM2O94777 84 aa3.45□□□□□ -1.86
NEDD4-203ENST00000502612 IGKCP01834 107 aa3.45□□□□□ -1.86
NEDD4-203ENST00000502612 RNASE3P12724 160 aaKnown RBP3.45□□□□□ -1.86
NEDD4-203ENST00000502612 BATFQ16520 125 aa3.45□□□□□ -1.86
NEDD4-203ENST00000502612 PRR9Q5T870 116 aa3.45□□□□□ -1.86
NEDD4-203ENST00000502612 LINC00336Q6ZUF6 198 aa3.45□□□□□ -1.86
NEDD4-203ENST00000502612 BOD1L2Q8IYS8 172 aa3.45□□□□□ -1.86
NEDD4-203ENST00000502612 WFDC11Q8NEX6 87 aa3.45□□□□□ -1.86
NEDD4-203ENST00000502612 TOMM6Q96B49 74 aa3.45□□□□□ -1.86
NEDD4-203ENST00000502612 TMEM141Q96I45 108 aa3.45□□□□□ -1.86
NEDD4-203ENST00000502612 SCGB3A1Q96QR1 104 aa3.45□□□□□ -1.86
NEDD4-203ENST00000502612 CYSLTR1Q9Y271 337 aa3.45□□□□□ -1.86
NEDD4-203ENST00000502612 ATMQ13315 3056 aa3.45□□□□□ -1.86
NEDD4-203ENST00000502612 ABCA4P78363 2273 aa3.45□□□□□ -1.86
NEDD4-203ENST00000502612 IGLV2-18A0A075B6J9 118 aa3.44□□□□□ -1.86
NEDD4-203ENST00000502612 A0A087WX48 190 aa3.44□□□□□ -1.86
NEDD4-203ENST00000502612 A0A1B0GV90 55 aa3.44□□□□□ -1.86
NEDD4-203ENST00000502612 H3BMM0 161 aa3.44□□□□□ -1.86
NEDD4-203ENST00000502612 PRB4P10163 310 aaPredicted RBP3.44□□□□□ -1.86
NEDD4-203ENST00000502612 DEFB131AP59861 70 aa3.44□□□□□ -1.86
NEDD4-203ENST00000502612 SEC11AP67812 179 aa3.44□□□□□ -1.86
NEDD4-203ENST00000502612 SMAGPQ0VAQ4 97 aa3.44□□□□□ -1.86
NEDD4-203ENST00000502612 RHOHQ15669 191 aa3.44□□□□□ -1.86
NEDD4-203ENST00000502612 ZNF56Q15929 161 aa3.44□□□□□ -1.86
NEDD4-203ENST00000502612 DEFB114Q30KQ6 69 aa3.44□□□□□ -1.86
NEDD4-203ENST00000502612 IGFL1Q6UW32 110 aa3.44□□□□□ -1.86
NEDD4-203ENST00000502612 C10orf99Q6UWK7 81 aa3.44□□□□□ -1.86
NEDD4-203ENST00000502612 EPG5Q9HCE0 2579 aa3.44□□□□□ -1.86
NEDD4-203ENST00000502612 DOPEY1Q5JWR5 2465 aa3.44□□□□□ -1.86
NEDD4-203ENST00000502612 PKD1L2Q7Z442 2459 aa3.44□□□□□ -1.86
NEDD4-203ENST00000502612 TRAV26-2A0A0B4J265 109 aa3.43□□□□□ -1.86
NEDD4-203ENST00000502612 A8MUU9 505 aa3.43□□□□□ -1.86
NEDD4-203ENST00000502612 OR11H12B2RN74 326 aa3.43□□□□□ -1.86
NEDD4-203ENST00000502612 F8VRH5 84 aa3.43□□□□□ -1.86
NEDD4-203ENST00000502612 I3L3M4 83 aa3.43□□□□□ -1.86
NEDD4-203ENST00000502612 M0R2P5 195 aa3.43□□□□□ -1.86
NEDD4-203ENST00000502612 HSD52Q0P140 79 aa3.43□□□□□ -1.86
NEDD4-203ENST00000502612 SPINK13Q1W4C9 94 aa3.43□□□□□ -1.86
NEDD4-203ENST00000502612 ORAOV1Q8WV07 137 aa3.43□□□□□ -1.86
NEDD4-203ENST00000502612 RMI2Q96E14 147 aa3.43□□□□□ -1.86
NEDD4-203ENST00000502612 DNAJC30Q96LL9 226 aa3.43□□□□□ -1.86
NEDD4-203ENST00000502612 CHTOPQ9Y3Y2 248 aaKnown RBP3.43□□□□□ -1.86
NEDD4-203ENST00000502612 COL6A6A6NMZ7 2263 aa3.43□□□□□ -1.86
NEDD4-203ENST00000502612 HIVEP3Q5T1R4 2406 aa3.43□□□□□ -1.86
NEDD4-203ENST00000502612 TRBV27A0A0K0K1C4 114 aa3.42□□□□□ -1.86
NEDD4-203ENST00000502612 SDHAF1A6NFY7 115 aa3.42□□□□□ -1.86
NEDD4-203ENST00000502612 ZNF25P17030 456 aaPredicted RBP3.42□□□□□ -1.86
NEDD4-203ENST00000502612 HINT1P49773 126 aaPredicted RBP3.42□□□□□ -1.86
NEDD4-203ENST00000502612 CRYBA4P53673 196 aa3.42□□□□□ -1.86
NEDD4-203ENST00000502612 POLR2KP53803 58 aaKnown RBP3.42□□□□□ -1.86
NEDD4-203ENST00000502612 TAL2Q16559 108 aa3.42□□□□□ -1.86
NEDD4-203ENST00000502612 DEFB136Q30KP8 78 aa3.42□□□□□ -1.86
NEDD4-203ENST00000502612 KRTAP13-2Q52LG2 175 aa3.42□□□□□ -1.86
NEDD4-203ENST00000502612 FAM74A4Q5TZK3 123 aa3.42□□□□□ -1.86
NEDD4-203ENST00000502612 MORN3Q6PF18 240 aaPredicted RBP3.42□□□□□ -1.86
NEDD4-203ENST00000502612 AMTNQ6UX39 209 aa3.42□□□□□ -1.86
NEDD4-203ENST00000502612 NEGR1Q7Z3B1 354 aa3.42□□□□□ -1.86
NEDD4-203ENST00000502612 LINC00469Q8N7U9 141 aa3.42□□□□□ -1.86
NEDD4-203ENST00000502612 OR11H2Q8NH07 326 aa3.42□□□□□ -1.86
NEDD4-203ENST00000502612 LINC01587Q99440 93 aa3.42□□□□□ -1.86
NEDD4-203ENST00000502612 TMEM208Q9BTX3 173 aa3.42□□□□□ -1.86
NEDD4-203ENST00000502612 HIGD1BQ9P298 99 aa3.42□□□□□ -1.86
NEDD4-203ENST00000502612 ITPR1Q14643 2758 aa3.42□□□□□ -1.86
NEDD4-203ENST00000502612 ARHGAP32A7KAX9 2087 aa3.42□□□□□ -1.86
NEDD4-203ENST00000502612 PLXNB1O43157 2135 aa3.41□□□□□ -1.86
NEDD4-203ENST00000502612 TRAV12-2A0A075B6T6 113 aa3.41□□□□□ -1.86
NEDD4-203ENST00000502612 KNCNA6PVL3 124 aa3.41□□□□□ -1.86
NEDD4-203ENST00000502612 CRYGDP07320 174 aa3.41□□□□□ -1.86
NEDD4-203ENST00000502612 INSL3P51460 131 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms