RNA–Protein interactions for RNA: ENST00000502501.1

PROM1-202, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-202ENST00000502501 IGLV10-54A0A075B6I4 117 aa16.76■□□□□ 0.27
PROM1-202ENST00000502501 ORMDL3Q8N138 153 aa16.76■□□□□ 0.27
PROM1-202ENST00000502501 COMMD7Q86VX2 200 aa16.75■□□□□ 0.27
PROM1-202ENST00000502501 OR5A1Q8NGJ0 315 aa16.75■□□□□ 0.27
PROM1-202ENST00000502501 SMIM2Q9BVW6 85 aa16.75■□□□□ 0.27
PROM1-202ENST00000502501 LAMTOR2Q9Y2Q5 125 aa16.75■□□□□ 0.27
PROM1-202ENST00000502501 DGAT2L7PQ6IED9 249 aa16.74■□□□□ 0.27
PROM1-202ENST00000502501 KRTAP17-1Q9BYP8 105 aa16.74■□□□□ 0.27
PROM1-202ENST00000502501 TRAV9-1A0A075B6T8 112 aa16.73■□□□□ 0.27
PROM1-202ENST00000502501 C10orf91Q5T1B1 145 aa16.73■□□□□ 0.27
PROM1-202ENST00000502501 CDC42SE2Q9NRR3 84 aa16.73■□□□□ 0.27
PROM1-202ENST00000502501 TIMM21Q9BVV7 248 aa16.72■□□□□ 0.27
PROM1-202ENST00000502501 NPYP01303 97 aa16.71■□□□□ 0.27
PROM1-202ENST00000502501 PRSS1P07477 247 aa16.71■□□□□ 0.27
PROM1-202ENST00000502501 TMEM136Q6ZRR5 245 aa16.71■□□□□ 0.27
PROM1-202ENST00000502501 TMEM18Q96B42 140 aa16.71■□□□□ 0.27
PROM1-202ENST00000502501 PRSS47A8MTI9 375 aa16.7■□□□□ 0.26
PROM1-202ENST00000502501 UBE2D4Q9Y2X8 147 aa16.7■□□□□ 0.26
PROM1-202ENST00000502501 CNBPP62633 177 aaKnown RBP16.69■□□□□ 0.26
PROM1-202ENST00000502501 ZNF664Q8N3J9 261 aa16.69■□□□□ 0.26
PROM1-202ENST00000502501 CHCHD10Q8WYQ3 142 aaPredicted RBP16.69■□□□□ 0.26
PROM1-202ENST00000502501 CCL25O15444 150 aa16.68■□□□□ 0.26
PROM1-202ENST00000502501 PRELID3AQ96N28 172 aa16.68■□□□□ 0.26
PROM1-202ENST00000502501 CARHSP1Q9Y2V2 147 aaKnown RBP16.68■□□□□ 0.26
PROM1-202ENST00000502501 VPS13BQ7Z7G8 4022 aa16.67■□□□□ 0.26
PROM1-202ENST00000502501 KRTAP4-5Q9BYR2 181 aa16.67■□□□□ 0.26
PROM1-202ENST00000502501 FAM30AQ9NZY2 134 aa16.67■□□□□ 0.26
PROM1-202ENST00000502501 LINC00959A0A1B0GUT2 108 aa16.66■□□□□ 0.26
PROM1-202ENST00000502501 GAGE12HA6NDE8 117 aa16.66■□□□□ 0.26
PROM1-202ENST00000502501 CFAP161Q6P656 301 aa16.66■□□□□ 0.26
PROM1-202ENST00000502501 IGKV3OR2-268A0A0C4DH90 116 aa16.65■□□□□ 0.26
PROM1-202ENST00000502501 C9orf163Q8N9P6 203 aa16.65■□□□□ 0.26
PROM1-202ENST00000502501 FOXI1Q12951 378 aa16.64■□□□□ 0.25
PROM1-202ENST00000502501 RHEBQ15382 184 aa16.64■□□□□ 0.25
PROM1-202ENST00000502501 SRRM2Q9UQ35 2752 aaKnown RBP16.63■□□□□ 0.25
PROM1-202ENST00000502501 C15orf56Q8N910 161 aa16.63■□□□□ 0.25
PROM1-202ENST00000502501 SPANXA1Q9NS26 97 aa16.63■□□□□ 0.25
PROM1-202ENST00000502501 hDV102S1A0JD36 115 aa16.62■□□□□ 0.25
PROM1-202ENST00000502501 SS18Q15532 418 aa16.62■□□□□ 0.25
PROM1-202ENST00000502501 EPM2AB3EWF7 344 aa16.61■□□□□ 0.25
PROM1-202ENST00000502501 K7EMI3 77 aa16.61■□□□□ 0.25
PROM1-202ENST00000502501 LINC01620Q4KN68 170 aa16.61■□□□□ 0.25
PROM1-202ENST00000502501 CD164L2Q6UWJ8 174 aa16.61■□□□□ 0.25
PROM1-202ENST00000502501 MAP1LC3AQ9H492 121 aa16.61■□□□□ 0.25
PROM1-202ENST00000502501 GVQW2A0A096LPI5 108 aaPredicted RBP16.6■□□□□ 0.25
PROM1-202ENST00000502501 C1orf196B1AJZ1 125 aa16.6■□□□□ 0.25
PROM1-202ENST00000502501 S100PP25815 95 aa16.6■□□□□ 0.25
PROM1-202ENST00000502501 AP5S1Q9NUS5 200 aa16.6■□□□□ 0.25
PROM1-202ENST00000502501 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.59■□□□□ 0.25
PROM1-202ENST00000502501 RAB5AP20339 215 aa16.59■□□□□ 0.25
PROM1-202ENST00000502501 XCL1P47992 114 aa16.59■□□□□ 0.25
PROM1-202ENST00000502501 MRPS36P82909 103 aaKnown RBP16.59■□□□□ 0.25
PROM1-202ENST00000502501 CHAC1Q9BUX1 264 aa16.59■□□□□ 0.25
PROM1-202ENST00000502501 COX19Q49B96 90 aa16.58■□□□□ 0.24
PROM1-202ENST00000502501 RPL39P62891 51 aaKnown RBP16.57■□□□□ 0.24
PROM1-202ENST00000502501 Q6ZUT4 128 aa16.57■□□□□ 0.24
PROM1-202ENST00000502501 Q8N8P6 123 aa16.57■□□□□ 0.24
PROM1-202ENST00000502501 PYGO1Q9Y3Y4 419 aa16.57■□□□□ 0.24
PROM1-202ENST00000502501 Q5VSD8 79 aa16.56■□□□□ 0.24
PROM1-202ENST00000502501 GNB1LQ9BYB4 327 aa16.56■□□□□ 0.24
PROM1-202ENST00000502501 SCXQ7RTU7 201 aa16.55■□□□□ 0.24
PROM1-202ENST00000502501 FAM104AQ969W3 186 aa16.55■□□□□ 0.24
PROM1-202ENST00000502501 IGHV1-58A0A0C4DH39 117 aa16.54■□□□□ 0.24
PROM1-202ENST00000502501 SLPIP03973 132 aa16.54■□□□□ 0.24
PROM1-202ENST00000502501 SDIM1Q6ZPB5 146 aa16.54■□□□□ 0.24
PROM1-202ENST00000502501 FAM229AH3BQW9 127 aa16.53■□□□□ 0.24
PROM1-202ENST00000502501 HAMPP81172 84 aa16.53■□□□□ 0.24
PROM1-202ENST00000502501 NXT2Q9NPJ8 142 aaKnown RBP16.53■□□□□ 0.24
PROM1-202ENST00000502501 MT-ND6P03923 174 aa16.52■□□□□ 0.24
PROM1-202ENST00000502501 IFI27P40305 119 aaPredicted RBP16.52■□□□□ 0.24
PROM1-202ENST00000502501 ORMDL2Q53FV1 153 aa16.52■□□□□ 0.24
PROM1-202ENST00000502501 IGHV3-64A0A075B6Q5 118 aa16.51■□□□□ 0.23
PROM1-202ENST00000502501 NPSP0C0P6 89 aa16.51■□□□□ 0.23
PROM1-202ENST00000502501 LOC389332A0A1B0GUA5 103 aa16.5■□□□□ 0.23
PROM1-202ENST00000502501 SMR3BP02814 79 aaPredicted RBP16.5■□□□□ 0.23
PROM1-202ENST00000502501 CIRBPQ14011 172 aaKnown RBP16.5■□□□□ 0.23
PROM1-202ENST00000502501 CIRBP-AS1Q8TBR5 109 aa16.5■□□□□ 0.23
PROM1-202ENST00000502501 RPS10P5Q9NQ39 176 aa16.5■□□□□ 0.23
PROM1-202ENST00000502501 TRAV13-1A0A0B4J241 112 aa16.49■□□□□ 0.23
PROM1-202ENST00000502501 NDUFA5Q16718 116 aa16.49■□□□□ 0.23
PROM1-202ENST00000502501 RNASE13Q5GAN3 156 aaKnown RBP16.49■□□□□ 0.23
PROM1-202ENST00000502501 SVBPQ8N300 66 aa16.49■□□□□ 0.23
PROM1-202ENST00000502501 COX7A2LO14548 114 aa16.48■□□□□ 0.23
PROM1-202ENST00000502501 HIGD2BQ4VC39 106 aa16.48■□□□□ 0.23
PROM1-202ENST00000502501 CYSLTR1Q9Y271 337 aa16.48■□□□□ 0.23
PROM1-202ENST00000502501 G0S2P27469 103 aa16.47■□□□□ 0.23
PROM1-202ENST00000502501 SNAPINO95295 136 aa16.46■□□□□ 0.23
PROM1-202ENST00000502501 IGLV4-3A0A075B6K6 122 aa16.45■□□□□ 0.22
PROM1-202ENST00000502501 APOC3P02656 99 aa16.45■□□□□ 0.22
PROM1-202ENST00000502501 C2orf66Q6UXQ4 117 aa16.45■□□□□ 0.22
PROM1-202ENST00000502501 PKIGQ9Y2B9 76 aa16.45■□□□□ 0.22
PROM1-202ENST00000502501 IFITM10A6NMD0 228 aa16.44■□□□□ 0.22
PROM1-202ENST00000502501 LINC00528Q8N1L1 170 aa16.44■□□□□ 0.22
PROM1-202ENST00000502501 TMEM141Q96I45 108 aa16.44■□□□□ 0.22
PROM1-202ENST00000502501 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.44■□□□□ 0.22
PROM1-202ENST00000502501 MYCBP2O75592 4640 aa16.43■□□□□ 0.22
PROM1-202ENST00000502501 IGHV3OR16-9A0A0B4J2B5 98 aa16.43■□□□□ 0.22
PROM1-202ENST00000502501 MALP21145 153 aa16.43■□□□□ 0.22
PROM1-202ENST00000502501 OPRPNQ99935 248 aaPredicted RBP16.43■□□□□ 0.22
PROM1-202ENST00000502501 ALKBH7Q9BT30 221 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms