RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 M0R2N4 97 aa11.17□□□□□ -0.62
LMNA-217ENST00000498722 RPL39P62891 51 aaKnown RBP11.17□□□□□ -0.62
LMNA-217ENST00000498722 PAPPA-AS1Q5QFB9 102 aa11.17□□□□□ -0.62
LMNA-217ENST00000498722 DEFB104AQ8WTQ1 72 aa11.17□□□□□ -0.62
LMNA-217ENST00000498722 BAALCQ8WXS3 180 aa11.17□□□□□ -0.62
LMNA-217ENST00000498722 PMCHL2Q9BQD1 86 aa11.17□□□□□ -0.62
LMNA-217ENST00000498722 PYGO1Q9Y3Y4 419 aa11.17□□□□□ -0.62
LMNA-217ENST00000498722 IGHV3-38A0A0C4DH36 116 aa11.16□□□□□ -0.62
LMNA-217ENST00000498722 GYPEP15421 78 aa11.16□□□□□ -0.62
LMNA-217ENST00000498722 SMAGPQ0VAQ4 97 aa11.16□□□□□ -0.62
LMNA-217ENST00000498722 MRPL23Q16540 153 aaKnown RBP11.16□□□□□ -0.62
LMNA-217ENST00000498722 TMEM97Q5BJF2 176 aa11.16□□□□□ -0.62
LMNA-217ENST00000498722 CHCHD7Q9BUK0 85 aa11.16□□□□□ -0.62
LMNA-217ENST00000498722 GTSF1LQ9H1H1 148 aa11.16□□□□□ -0.62
LMNA-217ENST00000498722 LINC00588Q9Y4M8 146 aa11.16□□□□□ -0.62
LMNA-217ENST00000498722 DPM2O94777 84 aa11.15□□□□□ -0.62
LMNA-217ENST00000498722 IGKCP01834 107 aa11.15□□□□□ -0.62
LMNA-217ENST00000498722 PMVKQ15126 192 aa11.15□□□□□ -0.62
LMNA-217ENST00000498722 CHTOPQ9Y3Y2 248 aaKnown RBP11.15□□□□□ -0.62
LMNA-217ENST00000498722 VPS13DQ5THJ4 4388 aa11.15□□□□□ -0.62
LMNA-217ENST00000498722 F8VRH5 84 aa11.14□□□□□ -0.63
LMNA-217ENST00000498722 PLNP26678 52 aa11.14□□□□□ -0.63
LMNA-217ENST00000498722 ESRGQ1W209 222 aa11.14□□□□□ -0.63
LMNA-217ENST00000498722 SPANXA1Q9NS26 97 aa11.14□□□□□ -0.63
LMNA-217ENST00000498722 LOC100131303A0A0U1RQF7 123 aa11.13□□□□□ -0.63
LMNA-217ENST00000498722 hDV102S1A0JD36 115 aa11.13□□□□□ -0.63
LMNA-217ENST00000498722 LINC00694P0DN24 101 aa11.13□□□□□ -0.63
LMNA-217ENST00000498722 KMT2AQ03164 3969 aa11.13□□□□□ -0.63
LMNA-217ENST00000498722 PRSS29PA6NIE9 313 aa11.12□□□□□ -0.63
LMNA-217ENST00000498722 DDTP30046 118 aa11.12□□□□□ -0.63
LMNA-217ENST00000498722 MAJINQ3KP22 176 aa11.12□□□□□ -0.63
LMNA-217ENST00000498722 TIMM21Q9BVV7 248 aa11.12□□□□□ -0.63
LMNA-217ENST00000498722 MRPL35Q9NZE8 188 aaKnown RBP11.12□□□□□ -0.63
LMNA-217ENST00000498722 H7C423 109 aa11.11□□□□□ -0.63
LMNA-217ENST00000498722 MIEN1Q9BRT3 115 aa11.11□□□□□ -0.63
LMNA-217ENST00000498722 UQCR10Q9UDW1 63 aa11.11□□□□□ -0.63
LMNA-217ENST00000498722 UBE2D4Q9Y2X8 147 aa11.11□□□□□ -0.63
LMNA-217ENST00000498722 IGLV4-3A0A075B6K6 122 aa11.1□□□□□ -0.63
LMNA-217ENST00000498722 TRBV25-1A0A075B6N4 114 aa11.1□□□□□ -0.63
LMNA-217ENST00000498722 VCX2Q9H322 139 aa11.1□□□□□ -0.63
LMNA-217ENST00000498722 CST9LQ9H4G1 147 aa11.1□□□□□ -0.63
LMNA-217ENST00000498722 MRPS16Q9Y3D3 137 aaKnown RBP11.1□□□□□ -0.63
LMNA-217ENST00000498722 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.09□□□□□ -0.63
LMNA-217ENST00000498722 IGKV2-29A2NJV5 120 aaPredicted RBP11.09□□□□□ -0.63
LMNA-217ENST00000498722 IGLC3P0DOY3 106 aa11.09□□□□□ -0.63
LMNA-217ENST00000498722 NTM-AS1Q6ZSK4 140 aa11.09□□□□□ -0.63
LMNA-217ENST00000498722 ATP6V0E2Q8NHE4 81 aa11.09□□□□□ -0.63
LMNA-217ENST00000498722 TMEM243Q9BU79 118 aa11.09□□□□□ -0.63
LMNA-217ENST00000498722 Q9H8V8 135 aa11.09□□□□□ -0.63
LMNA-217ENST00000498722 DNAH6Q9C0G6 4158 aa11.09□□□□□ -0.63
LMNA-217ENST00000498722 UBE2L6O14933 153 aa11.09□□□□□ -0.63
LMNA-217ENST00000498722 MRPS36P82909 103 aaKnown RBP11.09□□□□□ -0.63
LMNA-217ENST00000498722 LYPD5Q6UWN5 251 aa11.09□□□□□ -0.63
LMNA-217ENST00000498722 SH2D6Q7Z4S9 175 aa11.09□□□□□ -0.63
LMNA-217ENST00000498722 DGAT2L7PQ6IED9 249 aa11.08□□□□□ -0.64
LMNA-217ENST00000498722 MRPL52Q86TS9 123 aaKnown RBP11.08□□□□□ -0.64
LMNA-217ENST00000498722 AMELXQ99217 191 aa11.08□□□□□ -0.64
LMNA-217ENST00000498722 CSDC2Q9Y534 153 aaKnown RBP11.08□□□□□ -0.64
LMNA-217ENST00000498722 NBDYA0A0U1RRE5 68 aa11.07□□□□□ -0.64
LMNA-217ENST00000498722 ZC2HC1BQ5TFG8 222 aa11.07□□□□□ -0.64
LMNA-217ENST00000498722 C2orf88Q9BSF0 95 aa11.07□□□□□ -0.64
LMNA-217ENST00000498722 UPK3BQ9BT76 320 aa11.07□□□□□ -0.64
LMNA-217ENST00000498722 EPPK1P58107 5090 aaKnown RBP11.06□□□□□ -0.64
LMNA-217ENST00000498722 TRBV6-8A0A0A6YYG3 113 aa11.06□□□□□ -0.64
LMNA-217ENST00000498722 LINC00587B1AMM8 73 aa11.06□□□□□ -0.64
LMNA-217ENST00000498722 ANKRD39Q53RE8 183 aa11.06□□□□□ -0.64
LMNA-217ENST00000498722 STPG4Q8N801 248 aa11.06□□□□□ -0.64
LMNA-217ENST00000498722 C14orf144Q96I85 54 aa11.06□□□□□ -0.64
LMNA-217ENST00000498722 TMEM101Q96IK0 257 aa11.06□□□□□ -0.64
LMNA-217ENST00000498722 OPRPNQ99935 248 aaPredicted RBP11.06□□□□□ -0.64
LMNA-217ENST00000498722 IGLV4-69A0A075B6H9 119 aa11.05□□□□□ -0.64
LMNA-217ENST00000498722 SIVA1O15304 175 aa11.05□□□□□ -0.64
LMNA-217ENST00000498722 COX8AP10176 69 aa11.05□□□□□ -0.64
LMNA-217ENST00000498722 FGF6P10767 208 aa11.05□□□□□ -0.64
LMNA-217ENST00000498722 ZNF25P17030 456 aaPredicted RBP11.05□□□□□ -0.64
LMNA-217ENST00000498722 AMMECR1LQ6DCA0 310 aa11.05□□□□□ -0.64
LMNA-217ENST00000498722 SLC25A34Q6PIV7 304 aa11.05□□□□□ -0.64
LMNA-217ENST00000498722 Q6ZR54 194 aa11.05□□□□□ -0.64
LMNA-217ENST00000498722 HERVK_113P61574 105 aa11.04□□□□□ -0.64
LMNA-217ENST00000498722 TTC32Q5I0X7 151 aa11.04□□□□□ -0.64
LMNA-217ENST00000498722 C1orf134Q5TEV5 83 aa11.04□□□□□ -0.64
LMNA-217ENST00000498722 NFE4Q86UQ8 179 aa11.04□□□□□ -0.64
LMNA-217ENST00000498722 HNRNPA3P51991 378 aaKnown RBP11.03□□□□□ -0.64
LMNA-217ENST00000498722 Q6ZUT4 128 aa11.03□□□□□ -0.64
LMNA-217ENST00000498722 OR5A1Q8NGJ0 315 aa11.03□□□□□ -0.64
LMNA-217ENST00000498722 C11orf86A6NJI1 115 aa11.02□□□□□ -0.65
LMNA-217ENST00000498722 WFDC10BQ8IUB3 73 aa11.02□□□□□ -0.65
LMNA-217ENST00000498722 FAM104AQ969W3 186 aa11.02□□□□□ -0.65
LMNA-217ENST00000498722 CHCHD5Q9BSY4 110 aa11.02□□□□□ -0.65
LMNA-217ENST00000498722 DLEU1O43261 78 aa11.01□□□□□ -0.65
LMNA-217ENST00000498722 NMUP48645 174 aa11.01□□□□□ -0.65
LMNA-217ENST00000498722 CHAC1Q9BUX1 264 aa11.01□□□□□ -0.65
LMNA-217ENST00000498722 TRAV8-6A0A0B4J262 113 aa11□□□□□ -0.65
LMNA-217ENST00000498722 TMEM170BQ5T4T1 132 aa11□□□□□ -0.65
LMNA-217ENST00000498722 BIRC6Q9NR09 4857 aa11□□□□□ -0.65
LMNA-217ENST00000498722 TINCRA0A1B0GVN0 87 aa10.99□□□□□ -0.65
LMNA-217ENST00000498722 E9PLD3 99 aa10.99□□□□□ -0.65
LMNA-217ENST00000498722 SEC11AP67812 179 aa10.99□□□□□ -0.65
LMNA-217ENST00000498722 GAGE6Q13070 117 aa10.99□□□□□ -0.65
LMNA-217ENST00000498722 LINC00336Q6ZUF6 198 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms