RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 AP5S1Q9NUS5 200 aa10.11□□□□□ -0.79
MUC1-220ENST00000498431 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.1□□□□□ -0.79
MUC1-220ENST00000498431 TRAV8-4A0A0B4J246 113 aa10.1□□□□□ -0.79
MUC1-220ENST00000498431 A0A1B0GW15 77 aa10.1□□□□□ -0.79
MUC1-220ENST00000498431 DPH3P1Q9H4G8 78 aa10.1□□□□□ -0.79
MUC1-220ENST00000498431 M0QY20 66 aa10.09□□□□□ -0.79
MUC1-220ENST00000498431 S100A8P05109 93 aa10.09□□□□□ -0.79
MUC1-220ENST00000498431 ATP5L2Q7Z4Y8 100 aa10.09□□□□□ -0.79
MUC1-220ENST00000498431 C7orf33Q8WU49 177 aa10.09□□□□□ -0.79
MUC1-220ENST00000498431 BTF3L4Q96K17 158 aa10.09□□□□□ -0.79
MUC1-220ENST00000498431 TRAV9-1A0A075B6T8 112 aa10.08□□□□□ -0.8
MUC1-220ENST00000498431 MGPP08493 103 aa10.08□□□□□ -0.8
MUC1-220ENST00000498431 HBBP68871 147 aa10.08□□□□□ -0.8
MUC1-220ENST00000498431 PRR3P79522 188 aaKnown RBP10.08□□□□□ -0.8
MUC1-220ENST00000498431 COX6A2Q02221 97 aa10.08□□□□□ -0.8
MUC1-220ENST00000498431 MRPL54Q6P161 138 aaKnown RBP10.08□□□□□ -0.8
MUC1-220ENST00000498431 C15orf56Q8N910 161 aa10.08□□□□□ -0.8
MUC1-220ENST00000498431 TMEM191AQ9H0A3 160 aa10.08□□□□□ -0.8
MUC1-220ENST00000498431 A0A1B0GUV1 79 aa10.07□□□□□ -0.8
MUC1-220ENST00000498431 A0A1B0GXF2 115 aa10.07□□□□□ -0.8
MUC1-220ENST00000498431 CAMPP49913 170 aa10.07□□□□□ -0.8
MUC1-220ENST00000498431 PRSS3P2Q8NHM4 247 aa10.07□□□□□ -0.8
MUC1-220ENST00000498431 TMEM243Q9BU79 118 aa10.07□□□□□ -0.8
MUC1-220ENST00000498431 MAJINQ3KP22 176 aa10.06□□□□□ -0.8
MUC1-220ENST00000498431 SUMO4Q6EEV6 95 aa10.06□□□□□ -0.8
MUC1-220ENST00000498431 IGKV2-24A0A0C4DH68 120 aa10.05□□□□□ -0.8
MUC1-220ENST00000498431 LPAP08519 4548 aa10.05□□□□□ -0.8
MUC1-220ENST00000498431 A0A0J9YXV3 536 aa10.04□□□□□ -0.8
MUC1-220ENST00000498431 GAGE12HA6NDE8 117 aa10.04□□□□□ -0.8
MUC1-220ENST00000498431 H7C1H1 209 aa10.04□□□□□ -0.8
MUC1-220ENST00000498431 KRTAP10-8P60410 259 aa10.04□□□□□ -0.8
MUC1-220ENST00000498431 HIGD2BQ4VC39 106 aa10.04□□□□□ -0.8
MUC1-220ENST00000498431 RASL11AQ6T310 242 aa10.04□□□□□ -0.8
MUC1-220ENST00000498431 GATD1Q8NB37 220 aa10.04□□□□□ -0.8
MUC1-220ENST00000498431 SMCO4Q9NRQ5 59 aa10.04□□□□□ -0.8
MUC1-220ENST00000498431 S100A1P23297 94 aa10.03□□□□□ -0.8
MUC1-220ENST00000498431 RPS10P46783 165 aaKnown RBP10.03□□□□□ -0.8
MUC1-220ENST00000498431 AMN1Q8IY45 258 aa10.03□□□□□ -0.8
MUC1-220ENST00000498431 STPG4Q8N801 248 aa10.03□□□□□ -0.8
MUC1-220ENST00000498431 RAB4AP20338 218 aa10.02□□□□□ -0.81
MUC1-220ENST00000498431 FAM104BQ5XKR9 115 aa10.02□□□□□ -0.81
MUC1-220ENST00000498431 A0A096LNI7 61 aa10.01□□□□□ -0.81
MUC1-220ENST00000498431 IGKV3OR2-268A0A0C4DH90 116 aa10.01□□□□□ -0.81
MUC1-220ENST00000498431 ATP6V1G1O75348 118 aa10.01□□□□□ -0.81
MUC1-220ENST00000498431 COX19Q49B96 90 aa10.01□□□□□ -0.81
MUC1-220ENST00000498431 MRAP2Q96G30 205 aa10.01□□□□□ -0.81
MUC1-220ENST00000498431 TGIF2-C20orf24A0A0A6YYL0 155 aa10□□□□□ -0.81
MUC1-220ENST00000498431 TRAV26-2A0A0B4J265 109 aa10□□□□□ -0.81
MUC1-220ENST00000498431 MRPL51Q4U2R6 128 aaKnown RBP10□□□□□ -0.81
MUC1-220ENST00000498431 CBLN2Q8IUK8 224 aa10□□□□□ -0.81
MUC1-220ENST00000498431 TRBV24-1A0A075B6N3 115 aa9.99□□□□□ -0.81
MUC1-220ENST00000498431 UBE2L6O14933 153 aa9.99□□□□□ -0.81
MUC1-220ENST00000498431 GAS8-AS1O95177 125 aa9.99□□□□□ -0.81
MUC1-220ENST00000498431 AMTP48728 403 aa9.99□□□□□ -0.81
MUC1-220ENST00000498431 CFAP161Q6P656 301 aa9.99□□□□□ -0.81
MUC1-220ENST00000498431 TMEM136Q6ZRR5 245 aa9.99□□□□□ -0.81
MUC1-220ENST00000498431 NIT2Q9NQR4 276 aa9.99□□□□□ -0.81
MUC1-220ENST00000498431 SPINK6Q6UWN8 80 aa9.98□□□□□ -0.81
MUC1-220ENST00000498431 CHCHD10Q8WYQ3 142 aaPredicted RBP9.98□□□□□ -0.81
MUC1-220ENST00000498431 YPEL4Q96NS1 127 aa9.98□□□□□ -0.81
MUC1-220ENST00000498431 GNB1LQ9BYB4 327 aa9.98□□□□□ -0.81
MUC1-220ENST00000498431 GVQW2A0A096LPI5 108 aaPredicted RBP9.97□□□□□ -0.81
MUC1-220ENST00000498431 PPP1R17O96001 155 aa9.97□□□□□ -0.81
MUC1-220ENST00000498431 PPBPP02775 128 aa9.97□□□□□ -0.81
MUC1-220ENST00000498431 CKS2P33552 79 aa9.97□□□□□ -0.81
MUC1-220ENST00000498431 COTL1Q14019 142 aa9.97□□□□□ -0.81
MUC1-220ENST00000498431 SMKR1H3BMG3 65 aa9.96□□□□□ -0.82
MUC1-220ENST00000498431 MT-ND6P03923 174 aa9.96□□□□□ -0.82
MUC1-220ENST00000498431 SRSF9Q13242 221 aaKnown RBP eCLIP9.96□□□□□ -0.82
MUC1-220ENST00000498431 REG3GQ6UW15 175 aa9.96□□□□□ -0.82
MUC1-220ENST00000498431 RPL39LQ96EH5 51 aaKnown RBP9.96□□□□□ -0.82
MUC1-220ENST00000498431 TRBV6-5A0A0K0K1A5 114 aa9.95□□□□□ -0.82
MUC1-220ENST00000498431 NCR2O95944 276 aa9.95□□□□□ -0.82
MUC1-220ENST00000498431 APCSP02743 223 aa9.95□□□□□ -0.82
MUC1-220ENST00000498431 ORMDL3Q8N138 153 aa9.95□□□□□ -0.82
MUC1-220ENST00000498431 LINC00526Q96FQ7 95 aa9.95□□□□□ -0.82
MUC1-220ENST00000498431 D6R8Y8 96 aa9.94□□□□□ -0.82
MUC1-220ENST00000498431 SCO1O75880 301 aa9.94□□□□□ -0.82
MUC1-220ENST00000498431 FOXI1Q12951 378 aa9.94□□□□□ -0.82
MUC1-220ENST00000498431 NRACQ8N912 160 aa9.94□□□□□ -0.82
MUC1-220ENST00000498431 ST20Q9HBF5 79 aa9.94□□□□□ -0.82
MUC1-220ENST00000498431 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.93□□□□□ -0.82
MUC1-220ENST00000498431 IGKV2-29A2NJV5 120 aaPredicted RBP9.93□□□□□ -0.82
MUC1-220ENST00000498431 MRPL18Q9H0U6 180 aaKnown RBP9.93□□□□□ -0.82
MUC1-220ENST00000498431 TRAPPC1Q9Y5R8 145 aa9.93□□□□□ -0.82
MUC1-220ENST00000498431 SDHAF1A6NFY7 115 aa9.92□□□□□ -0.82
MUC1-220ENST00000498431 TNFRSF6BO95407 300 aa9.92□□□□□ -0.82
MUC1-220ENST00000498431 FABP9Q0Z7S8 132 aa9.92□□□□□ -0.82
MUC1-220ENST00000498431 RNASEKQ6P5S7 137 aaKnown RBP9.92□□□□□ -0.82
MUC1-220ENST00000498431 PRELID3AQ96N28 172 aa9.92□□□□□ -0.82
MUC1-220ENST00000498431 LAMTOR2Q9Y2Q5 125 aa9.92□□□□□ -0.82
MUC1-220ENST00000498431 NPYP01303 97 aa9.91□□□□□ -0.82
MUC1-220ENST00000498431 SUMO2P61956 95 aaKnown RBP9.91□□□□□ -0.82
MUC1-220ENST00000498431 KIAA1644Q3SXP7 199 aa9.91□□□□□ -0.82
MUC1-220ENST00000498431 AMMECR1LQ6DCA0 310 aa9.91□□□□□ -0.82
MUC1-220ENST00000498431 Q6ZRP5 223 aa9.91□□□□□ -0.82
MUC1-220ENST00000498431 C20orf78Q9BR46 151 aa9.91□□□□□ -0.82
MUC1-220ENST00000498431 COLCA2A8K830 154 aa9.9□□□□□ -0.82
MUC1-220ENST00000498431 XCL1P47992 114 aa9.9□□□□□ -0.82
MUC1-220ENST00000498431 POLR2KP53803 58 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms