RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 VCYO14598 125 aa12.08□□□□□ -0.48
PRKCB-209ENST00000498058 TCAPO15273 167 aa12.08□□□□□ -0.48
PRKCB-209ENST00000498058 PMCHP20382 165 aa12.08□□□□□ -0.48
PRKCB-209ENST00000498058 Q8N976 141 aa12.08□□□□□ -0.48
PRKCB-209ENST00000498058 ALKBH7Q9BT30 221 aaPredicted RBP12.08□□□□□ -0.48
PRKCB-209ENST00000498058 PKHD1L1Q86WI1 4243 aa12.07□□□□□ -0.48
PRKCB-209ENST00000498058 COTL1Q14019 142 aa12.07□□□□□ -0.48
PRKCB-209ENST00000498058 ENHOQ6UWT2 76 aa12.07□□□□□ -0.48
PRKCB-209ENST00000498058 RMI2Q96E14 147 aa12.07□□□□□ -0.48
PRKCB-209ENST00000498058 KIR2DL4Q99706 377 aa12.07□□□□□ -0.48
PRKCB-209ENST00000498058 TRBV27A0A0K0K1C4 114 aa12.06□□□□□ -0.48
PRKCB-209ENST00000498058 TRGC2P03986 189 aa12.06□□□□□ -0.48
PRKCB-209ENST00000498058 POLR2KP53803 58 aaKnown RBP12.06□□□□□ -0.48
PRKCB-209ENST00000498058 CIRBP-AS1Q8TBR5 109 aa12.06□□□□□ -0.48
PRKCB-209ENST00000498058 DEFB104AQ8WTQ1 72 aa12.06□□□□□ -0.48
PRKCB-209ENST00000498058 CHAC1Q9BUX1 264 aa12.06□□□□□ -0.48
PRKCB-209ENST00000498058 SMIM2Q9BVW6 85 aa12.06□□□□□ -0.48
PRKCB-209ENST00000498058 A0A087WX48 190 aa12.05□□□□□ -0.48
PRKCB-209ENST00000498058 PRSS47A8MTI9 375 aa12.05□□□□□ -0.48
PRKCB-209ENST00000498058 FCER1GP30273 86 aa12.05□□□□□ -0.48
PRKCB-209ENST00000498058 CHCHD7Q9BUK0 85 aa12.05□□□□□ -0.48
PRKCB-209ENST00000498058 NXT2Q9NPJ8 142 aaKnown RBP12.05□□□□□ -0.48
PRKCB-209ENST00000498058 TRBV6-8A0A0A6YYG3 113 aa12.03□□□□□ -0.48
PRKCB-209ENST00000498058 LOC389332A0A1B0GUA5 103 aa12.03□□□□□ -0.48
PRKCB-209ENST00000498058 MPV17L2Q567V2 206 aa12.03□□□□□ -0.48
PRKCB-209ENST00000498058 TRBV25-1A0A075B6N4 114 aa12.02□□□□□ -0.49
PRKCB-209ENST00000498058 IGHV1-24A0A0C4DH33 117 aa12.02□□□□□ -0.49
PRKCB-209ENST00000498058 TMEM262E9PQX1 116 aa12.02□□□□□ -0.49
PRKCB-209ENST00000498058 K7EMI3 77 aa12.02□□□□□ -0.49
PRKCB-209ENST00000498058 Q8N8P6 123 aa12.02□□□□□ -0.49
PRKCB-209ENST00000498058 PRSS3P2Q8NHM4 247 aa12.02□□□□□ -0.49
PRKCB-209ENST00000498058 AMTP48728 403 aa12.01□□□□□ -0.49
PRKCB-209ENST00000498058 RAB5BP61020 215 aa12.01□□□□□ -0.49
PRKCB-209ENST00000498058 PKIAP61925 76 aa12.01□□□□□ -0.49
PRKCB-209ENST00000498058 NTM-AS1Q6ZSK4 140 aa12.01□□□□□ -0.49
PRKCB-209ENST00000498058 HMCN2Q8NDA2 5059 aa12.01□□□□□ -0.49
PRKCB-209ENST00000498058 Q0VG73 95 aa12□□□□□ -0.49
PRKCB-209ENST00000498058 IQCJQ1A5X6 159 aa12□□□□□ -0.49
PRKCB-209ENST00000498058 FA2HQ7L5A8 372 aa12□□□□□ -0.49
PRKCB-209ENST00000498058 C18orf32Q8TCD1 76 aa12□□□□□ -0.49
PRKCB-209ENST00000498058 C1orf43Q9BWL3 253 aa12□□□□□ -0.49
PRKCB-209ENST00000498058 C1orf196B1AJZ1 125 aa11.99□□□□□ -0.49
PRKCB-209ENST00000498058 TSHBP01222 138 aa11.99□□□□□ -0.49
PRKCB-209ENST00000498058 TMEM243Q9BU79 118 aa11.99□□□□□ -0.49
PRKCB-209ENST00000498058 UBE2L6O14933 153 aa11.98□□□□□ -0.49
PRKCB-209ENST00000498058 ANGP03950 147 aaKnown RBP11.98□□□□□ -0.49
PRKCB-209ENST00000498058 G0S2P27469 103 aa11.98□□□□□ -0.49
PRKCB-209ENST00000498058 IFI27P40305 119 aaPredicted RBP11.98□□□□□ -0.49
PRKCB-209ENST00000498058 SMAGPQ0VAQ4 97 aa11.98□□□□□ -0.49
PRKCB-209ENST00000498058 ORMDL2Q53FV1 153 aa11.98□□□□□ -0.49
PRKCB-209ENST00000498058 KRTAP26-1Q6PEX3 210 aa11.98□□□□□ -0.49
PRKCB-209ENST00000498058 TMEM18Q96B42 140 aa11.98□□□□□ -0.49
PRKCB-209ENST00000498058 CHCHD5Q9BSY4 110 aa11.98□□□□□ -0.49
PRKCB-209ENST00000498058 USP17L23D6RBM5 183 aa11.97□□□□□ -0.49
PRKCB-209ENST00000498058 PRSS1P07477 247 aa11.97□□□□□ -0.49
PRKCB-209ENST00000498058 BAGE3Q86Y29 109 aa11.97□□□□□ -0.49
PRKCB-209ENST00000498058 H7C423 109 aa11.96□□□□□ -0.49
PRKCB-209ENST00000498058 HNRNPA3P51991 378 aaKnown RBP11.96□□□□□ -0.49
PRKCB-209ENST00000498058 CRPP02741 224 aa11.95□□□□□ -0.5
PRKCB-209ENST00000498058 C14orf177Q52M58 125 aa11.95□□□□□ -0.5
PRKCB-209ENST00000498058 CLPSL2Q6UWE3 100 aa11.95□□□□□ -0.5
PRKCB-209ENST00000498058 AP5S1Q9NUS5 200 aa11.95□□□□□ -0.5
PRKCB-209ENST00000498058 PANO1I0J062 215 aa11.94□□□□□ -0.5
PRKCB-209ENST00000498058 LINC00614P0C842 121 aa11.94□□□□□ -0.5
PRKCB-209ENST00000498058 RBX1P62877 108 aa11.94□□□□□ -0.5
PRKCB-209ENST00000498058 PRR34Q9NV39 138 aa11.94□□□□□ -0.5
PRKCB-209ENST00000498058 LINC01546A6NGU7 62 aa11.93□□□□□ -0.5
PRKCB-209ENST00000498058 LINC01549A6NIU2 74 aa11.93□□□□□ -0.5
PRKCB-209ENST00000498058 HIST1H2BKO60814 126 aa11.93□□□□□ -0.5
PRKCB-209ENST00000498058 HIST1H2BJP06899 126 aa11.93□□□□□ -0.5
PRKCB-209ENST00000498058 ESDP10768 282 aa11.93□□□□□ -0.5
PRKCB-209ENST00000498058 HIST1H2BOP23527 126 aa11.93□□□□□ -0.5
PRKCB-209ENST00000498058 HIST1H2BBP33778 126 aa11.93□□□□□ -0.5
PRKCB-209ENST00000498058 HIST1H2BDP58876 126 aa11.93□□□□□ -0.5
PRKCB-209ENST00000498058 HIST1H2BCP62807 126 aa11.93□□□□□ -0.5
PRKCB-209ENST00000498058 GAGE6Q13070 117 aa11.93□□□□□ -0.5
PRKCB-209ENST00000498058 HIST2H2BEQ16778 126 aa11.93□□□□□ -0.5
PRKCB-209ENST00000498058 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.93□□□□□ -0.5
PRKCB-209ENST00000498058 AMMECR1LQ6DCA0 310 aa11.93□□□□□ -0.5
PRKCB-209ENST00000498058 RNASEKQ6P5S7 137 aaKnown RBP11.93□□□□□ -0.5
PRKCB-209ENST00000498058 HIST1H2BHQ93079 126 aa11.93□□□□□ -0.5
PRKCB-209ENST00000498058 CHCHD1Q96BP2 118 aaKnown RBP11.93□□□□□ -0.5
PRKCB-209ENST00000498058 HIST1H2BNQ99877 126 aa11.93□□□□□ -0.5
PRKCB-209ENST00000498058 HIST1H2BMQ99879 126 aa11.93□□□□□ -0.5
PRKCB-209ENST00000498058 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.93□□□□□ -0.5
PRKCB-209ENST00000498058 MIAQ16674 131 aa11.92□□□□□ -0.5
PRKCB-209ENST00000498058 C20orf203Q8NBC4 194 aa11.92□□□□□ -0.5
PRKCB-209ENST00000498058 OXTP01178 125 aa11.91□□□□□ -0.5
PRKCB-209ENST00000498058 LINC00269Q8N2A0 174 aa11.91□□□□□ -0.5
PRKCB-209ENST00000498058 C9orf163Q8N9P6 203 aa11.91□□□□□ -0.5
PRKCB-209ENST00000498058 TMEM101Q96IK0 257 aa11.91□□□□□ -0.5
PRKCB-209ENST00000498058 CYSLTR1Q9Y271 337 aa11.91□□□□□ -0.5
PRKCB-209ENST00000498058 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.9□□□□□ -0.5
PRKCB-209ENST00000498058 IGKV2-29A2NJV5 120 aaPredicted RBP11.9□□□□□ -0.5
PRKCB-209ENST00000498058 ZNF25P17030 456 aaPredicted RBP11.9□□□□□ -0.5
PRKCB-209ENST00000498058 RPL37AP61513 92 aaKnown RBP11.89□□□□□ -0.51
PRKCB-209ENST00000498058 DGAT2L7PQ6IED9 249 aa11.89□□□□□ -0.51
PRKCB-209ENST00000498058 A0A1B0GUV1 79 aa11.88□□□□□ -0.51
PRKCB-209ENST00000498058 HSBP1O75506 76 aa11.88□□□□□ -0.51
PRKCB-209ENST00000498058 FGF6P10767 208 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms