RNA–Protein interactions for RNA: ENST00000497871.1

ATPAF2-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, human

TSL 2

Gene ATPAF2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATPAF2-209	ENST00000497871	BORCS7	Q96B45	105 aa		11.39	□□□□□ -0.59
ATPAF2-209	ENST00000497871	MRAP2	Q96G30	205 aa		11.39	□□□□□ -0.59
ATPAF2-209	ENST00000497871	CDC42SE2	Q9NRR3	84 aa		11.39	□□□□□ -0.59
ATPAF2-209	ENST00000497871	POLR2K	P53803	58 aa	Known RBP	11.38	□□□□□ -0.59
ATPAF2-209	ENST00000497871	BLOC1S1	P78537	153 aa		11.38	□□□□□ -0.59
ATPAF2-209	ENST00000497871	CD164L2	Q6UWJ8	174 aa		11.38	□□□□□ -0.59
ATPAF2-209	ENST00000497871	MRPL52	Q86TS9	123 aa	Known RBP	11.38	□□□□□ -0.59
ATPAF2-209	ENST00000497871	TMEM191A	Q9H0A3	160 aa		11.38	□□□□□ -0.59
ATPAF2-209	ENST00000497871	TMEM242	Q9NWH2	141 aa		11.38	□□□□□ -0.59
ATPAF2-209	ENST00000497871	LRP2	P98164	4655 aa		11.37	□□□□□ -0.59
ATPAF2-209	ENST00000497871	SPINK6	Q6UWN8	80 aa		11.37	□□□□□ -0.59
ATPAF2-209	ENST00000497871	LINC00526	Q96FQ7	95 aa		11.37	□□□□□ -0.59
ATPAF2-209	ENST00000497871	CARD19	Q96LW7	228 aa		11.37	□□□□□ -0.59
ATPAF2-209	ENST00000497871	TRBV27	A0A0K0K1C4	114 aa		11.36	□□□□□ -0.59
ATPAF2-209	ENST00000497871		A0A1B0GUT8	65 aa		11.36	□□□□□ -0.59
ATPAF2-209	ENST00000497871	ZNF561-AS1	K7EIQ3	104 aa		11.36	□□□□□ -0.59
ATPAF2-209	ENST00000497871	SYCN	Q0VAF6	134 aa		11.36	□□□□□ -0.59
ATPAF2-209	ENST00000497871	ZNF664	Q8N3J9	261 aa		11.36	□□□□□ -0.59
ATPAF2-209	ENST00000497871	TSKU	Q8WUA8	353 aa		11.36	□□□□□ -0.59
ATPAF2-209	ENST00000497871		A0A0J9YXV3	536 aa		11.35	□□□□□ -0.59
ATPAF2-209	ENST00000497871	HIGD1C	A8MV81	97 aa		11.35	□□□□□ -0.59
ATPAF2-209	ENST00000497871	RAB4A	P20338	218 aa		11.35	□□□□□ -0.59
ATPAF2-209	ENST00000497871	CEBPG	P53567	150 aa		11.35	□□□□□ -0.59
ATPAF2-209	ENST00000497871	C7orf77	A4D0Y5	90 aa		11.34	□□□□□ -0.59
ATPAF2-209	ENST00000497871	VCY	O14598	125 aa		11.33	□□□□□ -0.6
ATPAF2-209	ENST00000497871	KRTAP10-8	P60410	259 aa		11.33	□□□□□ -0.6
ATPAF2-209	ENST00000497871	SRSF9	Q13242	221 aa	Known RBP eCLIP	11.33	□□□□□ -0.6
ATPAF2-209	ENST00000497871	REG3G	Q6UW15	175 aa		11.33	□□□□□ -0.6
ATPAF2-209	ENST00000497871	ALKAL2	Q6UX46	152 aa		11.33	□□□□□ -0.6
ATPAF2-209	ENST00000497871		Q6ZRP5	223 aa		11.33	□□□□□ -0.6
ATPAF2-209	ENST00000497871	LINC01551	Q86U37	167 aa		11.33	□□□□□ -0.6
ATPAF2-209	ENST00000497871	C1orf196	B1AJZ1	125 aa		11.32	□□□□□ -0.6
ATPAF2-209	ENST00000497871	AMN1	Q8IY45	258 aa		11.32	□□□□□ -0.6
ATPAF2-209	ENST00000497871	ISOC2	Q96AB3	205 aa		11.32	□□□□□ -0.6
ATPAF2-209	ENST00000497871	SMIM7	Q9BQ49	75 aa		11.32	□□□□□ -0.6
ATPAF2-209	ENST00000497871	OSTC	Q9NRP0	149 aa		11.32	□□□□□ -0.6
ATPAF2-209	ENST00000497871	CSDC2	Q9Y534	153 aa	Known RBP	11.32	□□□□□ -0.6
ATPAF2-209	ENST00000497871	MAL	P21145	153 aa		11.31	□□□□□ -0.6
ATPAF2-209	ENST00000497871	CAMP	P49913	170 aa		11.31	□□□□□ -0.6
ATPAF2-209	ENST00000497871	PTTG1IP	P53801	180 aa		11.31	□□□□□ -0.6
ATPAF2-209	ENST00000497871	IGLV4-69	A0A075B6H9	119 aa		11.3	□□□□□ -0.6
ATPAF2-209	ENST00000497871	PPP1R17	O96001	155 aa		11.3	□□□□□ -0.6
ATPAF2-209	ENST00000497871	FCER1G	P30273	86 aa		11.3	□□□□□ -0.6
ATPAF2-209	ENST00000497871	SMAGP	Q0VAQ4	97 aa		11.3	□□□□□ -0.6
ATPAF2-209	ENST00000497871	EIF5A2	Q9GZV4	153 aa	Known RBP	11.3	□□□□□ -0.6
ATPAF2-209	ENST00000497871	LOC107984640	A0A0U1RRK4	108 aa		11.29	□□□□□ -0.6
ATPAF2-209	ENST00000497871	COX7A2L	O14548	114 aa		11.29	□□□□□ -0.6
ATPAF2-209	ENST00000497871	RIG	Q13278	110 aa		11.29	□□□□□ -0.6
ATPAF2-209	ENST00000497871	ZNF727	A8MUV8	499 aa		11.28	□□□□□ -0.6
ATPAF2-209	ENST00000497871	GAGE2B	Q13066	116 aa		11.28	□□□□□ -0.6
ATPAF2-209	ENST00000497871	UBE2D4	Q9Y2X8	147 aa		11.28	□□□□□ -0.6
ATPAF2-209	ENST00000497871	SMKR1	H3BMG3	65 aa		11.27	□□□□□ -0.61
ATPAF2-209	ENST00000497871	SUMO2	P61956	95 aa	Known RBP	11.27	□□□□□ -0.61
ATPAF2-209	ENST00000497871	ODF1	Q14990	250 aa		11.27	□□□□□ -0.61
ATPAF2-209	ENST00000497871	NRAC	Q8N912	160 aa		11.27	□□□□□ -0.61
ATPAF2-209	ENST00000497871	NUP35	Q8NFH5	326 aa		11.27	□□□□□ -0.61
ATPAF2-209	ENST00000497871	KIR2DL4	Q99706	377 aa		11.27	□□□□□ -0.61
ATPAF2-209	ENST00000497871	RNF213	Q63HN8	5207 aa		11.26	□□□□□ -0.61
ATPAF2-209	ENST00000497871	AKAP14	Q86UN6	197 aa		11.26	□□□□□ -0.61
ATPAF2-209	ENST00000497871	C2orf48	Q96LS8	159 aa		11.26	□□□□□ -0.61
ATPAF2-209	ENST00000497871	CAMK2N2	Q96S95	79 aa		11.26	□□□□□ -0.61
ATPAF2-209	ENST00000497871		V9GYV3	84 aa		11.26	□□□□□ -0.61
ATPAF2-209	ENST00000497871	TRAV13-1	A0A0B4J241	112 aa		11.25	□□□□□ -0.61
ATPAF2-209	ENST00000497871		A0A1W2PNN7	141 aa		11.25	□□□□□ -0.61
ATPAF2-209	ENST00000497871	APOM	O95445	188 aa		11.25	□□□□□ -0.61
ATPAF2-209	ENST00000497871	SRP19	P09132	144 aa	Known RBP	11.25	□□□□□ -0.61
ATPAF2-209	ENST00000497871	PPP1R2P9	O14990	202 aa		11.24	□□□□□ -0.61
ATPAF2-209	ENST00000497871	RNASE13	Q5GAN3	156 aa	Known RBP	11.24	□□□□□ -0.61
ATPAF2-209	ENST00000497871	TMEM18	Q96B42	140 aa		11.24	□□□□□ -0.61
ATPAF2-209	ENST00000497871	TIMM21	Q9BVV7	248 aa		11.24	□□□□□ -0.61
ATPAF2-209	ENST00000497871	NAT8B	Q9UHF3	227 aa		11.24	□□□□□ -0.61
ATPAF2-209	ENST00000497871	C5orf38	Q86SI9	138 aa		11.23	□□□□□ -0.61
ATPAF2-209	ENST00000497871	LINC00862	A6NCI5	91 aa		11.22	□□□□□ -0.61
ATPAF2-209	ENST00000497871	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	11.22	□□□□□ -0.61
ATPAF2-209	ENST00000497871	TMEM241	Q24JQ0	296 aa		11.22	□□□□□ -0.61
ATPAF2-209	ENST00000497871	C9orf116	Q5BN46	136 aa	Predicted RBP	11.22	□□□□□ -0.61
ATPAF2-209	ENST00000497871	FAM104B	Q5XKR9	115 aa		11.22	□□□□□ -0.61
ATPAF2-209	ENST00000497871	C20orf78	Q9BR46	151 aa		11.22	□□□□□ -0.61
ATPAF2-209	ENST00000497871	RNF151	Q2KHN1	245 aa		11.21	□□□□□ -0.61
ATPAF2-209	ENST00000497871	MRPL51	Q4U2R6	128 aa	Known RBP	11.21	□□□□□ -0.61
ATPAF2-209	ENST00000497871	TRBV24-1	A0A075B6N3	115 aa		11.2	□□□□□ -0.62
ATPAF2-209	ENST00000497871	FAM74A3	Q4VXF1	159 aa		11.2	□□□□□ -0.62
ATPAF2-209	ENST00000497871		Q6ZUT4	128 aa		11.2	□□□□□ -0.62
ATPAF2-209	ENST00000497871	PSORS1C2	Q9UIG4	136 aa		11.2	□□□□□ -0.62
ATPAF2-209	ENST00000497871	TCAP	O15273	167 aa		11.19	□□□□□ -0.62
ATPAF2-209	ENST00000497871	MT-ND6	P03923	174 aa		11.19	□□□□□ -0.62
ATPAF2-209	ENST00000497871	RPL23	P62829	140 aa	Known RBP	11.19	□□□□□ -0.62
ATPAF2-209	ENST00000497871	RPL32	P62910	135 aa	Known RBP	11.19	□□□□□ -0.62
ATPAF2-209	ENST00000497871	RPL18A	Q02543	176 aa	Known RBP	11.19	□□□□□ -0.62
ATPAF2-209	ENST00000497871	SPAG11B	Q08648	103 aa		11.19	□□□□□ -0.62
ATPAF2-209	ENST00000497871	OR10D4P	Q8NGN7	298 aa		11.19	□□□□□ -0.62
ATPAF2-209	ENST00000497871	OPRPN	Q99935	248 aa	Predicted RBP	11.19	□□□□□ -0.62
ATPAF2-209	ENST00000497871		F8WDY8	70 aa		11.18	□□□□□ -0.62
ATPAF2-209	ENST00000497871	CKS2	P33552	79 aa		11.18	□□□□□ -0.62
ATPAF2-209	ENST00000497871		A0A1B0GW15	77 aa		11.17	□□□□□ -0.62
ATPAF2-209	ENST00000497871	SMIM27	A0A1W2PRY6	76 aa		11.17	□□□□□ -0.62
ATPAF2-209	ENST00000497871	MRPL35	Q9NZE8	188 aa	Known RBP	11.17	□□□□□ -0.62
ATPAF2-209	ENST00000497871	C1orf137	Q5JT78	98 aa		11.16	□□□□□ -0.62
ATPAF2-209	ENST00000497871	PHF5A	Q7RTV0	110 aa	Known RBP	11.16	□□□□□ -0.62
ATPAF2-209	ENST00000497871	FAM104A	Q969W3	186 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms