RNA–Protein interactions for RNA: ENST00000496810.1

COL20A1-208, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-208ENST00000496810 C7orf77A4D0Y5 90 aa12.45□□□□□ -0.42
COL20A1-208ENST00000496810 CAMPP49913 170 aa12.45□□□□□ -0.42
COL20A1-208ENST00000496810 HNRNPA3P51991 378 aaKnown RBP12.45□□□□□ -0.42
COL20A1-208ENST00000496810 CIRBPQ14011 172 aaKnown RBP12.45□□□□□ -0.42
COL20A1-208ENST00000496810 AP5S1Q9NUS5 200 aa12.45□□□□□ -0.42
COL20A1-208ENST00000496810 LINC00959A0A1B0GUT2 108 aa12.44□□□□□ -0.42
COL20A1-208ENST00000496810 SUMO2P61956 95 aaKnown RBP12.44□□□□□ -0.42
COL20A1-208ENST00000496810 FAM104BQ5XKR9 115 aa12.44□□□□□ -0.42
COL20A1-208ENST00000496810 BTF3L4Q96K17 158 aa12.44□□□□□ -0.42
COL20A1-208ENST00000496810 IGHV3-64A0A075B6Q5 118 aa12.43□□□□□ -0.42
COL20A1-208ENST00000496810 GVQW2A0A096LPI5 108 aaPredicted RBP12.43□□□□□ -0.42
COL20A1-208ENST00000496810 CCL25O15444 150 aa12.43□□□□□ -0.42
COL20A1-208ENST00000496810 MRPL54Q6P161 138 aaKnown RBP12.43□□□□□ -0.42
COL20A1-208ENST00000496810 MRPL52Q86TS9 123 aaKnown RBP12.43□□□□□ -0.42
COL20A1-208ENST00000496810 TMEM101Q96IK0 257 aa12.43□□□□□ -0.42
COL20A1-208ENST00000496810 CDC42SE2Q9NRR3 84 aa12.43□□□□□ -0.42
COL20A1-208ENST00000496810 RPL37AP61513 92 aaKnown RBP12.42□□□□□ -0.42
COL20A1-208ENST00000496810 RNASE13Q5GAN3 156 aaKnown RBP12.42□□□□□ -0.42
COL20A1-208ENST00000496810 LINC00526Q96FQ7 95 aa12.42□□□□□ -0.42
COL20A1-208ENST00000496810 SMDT1Q9H4I9 107 aa12.42□□□□□ -0.42
COL20A1-208ENST00000496810 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.41□□□□□ -0.42
COL20A1-208ENST00000496810 J3QL48 77 aa12.41□□□□□ -0.42
COL20A1-208ENST00000496810 SPACA4Q8TDM5 124 aa12.41□□□□□ -0.42
COL20A1-208ENST00000496810 A0A1B0GXF2 115 aa12.4□□□□□ -0.42
COL20A1-208ENST00000496810 KRTAP29-1A8MX34 341 aaPredicted RBP12.4□□□□□ -0.42
COL20A1-208ENST00000496810 VCYO14598 125 aa12.4□□□□□ -0.42
COL20A1-208ENST00000496810 FCER1GP30273 86 aa12.4□□□□□ -0.42
COL20A1-208ENST00000496810 CFAP161Q6P656 301 aa12.4□□□□□ -0.42
COL20A1-208ENST00000496810 ZNF664Q8N3J9 261 aa12.4□□□□□ -0.42
COL20A1-208ENST00000496810 UBE2D4Q9Y2X8 147 aa12.4□□□□□ -0.42
COL20A1-208ENST00000496810 A0A087WYN8 130 aa12.39□□□□□ -0.43
COL20A1-208ENST00000496810 COX6A2Q02221 97 aa12.39□□□□□ -0.43
COL20A1-208ENST00000496810 Q6ZUT4 128 aa12.39□□□□□ -0.43
COL20A1-208ENST00000496810 PRSS3P2Q8NHM4 247 aa12.39□□□□□ -0.43
COL20A1-208ENST00000496810 D6R8Y8 96 aa12.37□□□□□ -0.43
COL20A1-208ENST00000496810 NPYP01303 97 aa12.37□□□□□ -0.43
COL20A1-208ENST00000496810 HBBP68871 147 aa12.37□□□□□ -0.43
COL20A1-208ENST00000496810 HMCN2Q8NDA2 5059 aa12.36□□□□□ -0.43
COL20A1-208ENST00000496810 IGKV2-24A0A0C4DH68 120 aa12.36□□□□□ -0.43
COL20A1-208ENST00000496810 TNFRSF6BO95407 300 aa12.36□□□□□ -0.43
COL20A1-208ENST00000496810 PPP1R17O96001 155 aa12.36□□□□□ -0.43
COL20A1-208ENST00000496810 CKS2P33552 79 aa12.36□□□□□ -0.43
COL20A1-208ENST00000496810 KIR2DL4Q99706 377 aa12.36□□□□□ -0.43
COL20A1-208ENST00000496810 TRBV24-1A0A075B6N3 115 aa12.35□□□□□ -0.43
COL20A1-208ENST00000496810 A0A1B0GW15 77 aa12.35□□□□□ -0.43
COL20A1-208ENST00000496810 PPP1R2P9O14990 202 aa12.35□□□□□ -0.43
COL20A1-208ENST00000496810 RPL39P62891 51 aaKnown RBP12.35□□□□□ -0.43
COL20A1-208ENST00000496810 SS18Q15532 418 aa12.35□□□□□ -0.43
COL20A1-208ENST00000496810 CD164L2Q6UWJ8 174 aa12.35□□□□□ -0.43
COL20A1-208ENST00000496810 FAM104AQ969W3 186 aa12.35□□□□□ -0.43
COL20A1-208ENST00000496810 A0A096LNI7 61 aa12.34□□□□□ -0.43
COL20A1-208ENST00000496810 IGHV1-58A0A0C4DH39 117 aa12.34□□□□□ -0.43
COL20A1-208ENST00000496810 LINC00862A6NCI5 91 aa12.34□□□□□ -0.43
COL20A1-208ENST00000496810 C20orf78Q9BR46 151 aa12.34□□□□□ -0.43
COL20A1-208ENST00000496810 SMIM2Q9BVW6 85 aa12.34□□□□□ -0.43
COL20A1-208ENST00000496810 PLAC8Q9NZF1 115 aa12.33□□□□□ -0.44
COL20A1-208ENST00000496810 CSDC2Q9Y534 153 aaKnown RBP12.33□□□□□ -0.44
COL20A1-208ENST00000496810 TRAV13-1A0A0B4J241 112 aa12.32□□□□□ -0.44
COL20A1-208ENST00000496810 RPL32P62910 135 aaKnown RBP12.32□□□□□ -0.44
COL20A1-208ENST00000496810 DPH3Q96FX2 82 aa12.32□□□□□ -0.44
COL20A1-208ENST00000496810 TCAPO15273 167 aa12.31□□□□□ -0.44
COL20A1-208ENST00000496810 MAJINQ3KP22 176 aa12.31□□□□□ -0.44
COL20A1-208ENST00000496810 CARD19Q96LW7 228 aa12.31□□□□□ -0.44
COL20A1-208ENST00000496810 OPRPNQ99935 248 aaPredicted RBP12.31□□□□□ -0.44
COL20A1-208ENST00000496810 F8W036 122 aa12.3□□□□□ -0.44
COL20A1-208ENST00000496810 S100A8P05109 93 aa12.3□□□□□ -0.44
COL20A1-208ENST00000496810 TIMM21Q9BVV7 248 aa12.3□□□□□ -0.44
COL20A1-208ENST00000496810 PHOX2AO14813 284 aa12.29□□□□□ -0.44
COL20A1-208ENST00000496810 ATP5L2Q7Z4Y8 100 aa12.29□□□□□ -0.44
COL20A1-208ENST00000496810 TNXBP22105 4242 aa12.29□□□□□ -0.44
COL20A1-208ENST00000496810 C1orf196B1AJZ1 125 aa12.28□□□□□ -0.44
COL20A1-208ENST00000496810 COX7A2LO14548 114 aa12.28□□□□□ -0.44
COL20A1-208ENST00000496810 IGLV4-69A0A075B6H9 119 aa12.27□□□□□ -0.45
COL20A1-208ENST00000496810 C5orf38Q86SI9 138 aa12.27□□□□□ -0.45
COL20A1-208ENST00000496810 ORMDL3Q8N138 153 aa12.27□□□□□ -0.45
COL20A1-208ENST00000496810 STPG4Q8N801 248 aa12.27□□□□□ -0.45
COL20A1-208ENST00000496810 ZNF561-AS1K7EIQ3 104 aa12.26□□□□□ -0.45
COL20A1-208ENST00000496810 OXTP01178 125 aa12.26□□□□□ -0.45
COL20A1-208ENST00000496810 SYCNQ0VAF6 134 aa12.26□□□□□ -0.45
COL20A1-208ENST00000496810 Q6ZRU5 148 aa12.26□□□□□ -0.45
COL20A1-208ENST00000496810 PRELID3AQ96N28 172 aa12.26□□□□□ -0.45
COL20A1-208ENST00000496810 PPBPP02775 128 aa12.25□□□□□ -0.45
COL20A1-208ENST00000496810 MALP21145 153 aa12.25□□□□□ -0.45
COL20A1-208ENST00000496810 RAB14P61106 215 aa12.25□□□□□ -0.45
COL20A1-208ENST00000496810 SMAGPQ0VAQ4 97 aa12.25□□□□□ -0.45
COL20A1-208ENST00000496810 PNRC1Q12796 327 aaPredicted RBP12.25□□□□□ -0.45
COL20A1-208ENST00000496810 TMEM136Q6ZRR5 245 aa12.25□□□□□ -0.45
COL20A1-208ENST00000496810 TMEM18Q96B42 140 aa12.25□□□□□ -0.45
COL20A1-208ENST00000496810 ADCYAP1P18509 176 aa12.24□□□□□ -0.45
COL20A1-208ENST00000496810 SPANXA1Q9NS26 97 aa12.24□□□□□ -0.45
COL20A1-208ENST00000496810 CLLU1Q5K131 121 aa12.23□□□□□ -0.45
COL20A1-208ENST00000496810 LOC389332A0A1B0GUA5 103 aa12.22□□□□□ -0.45
COL20A1-208ENST00000496810 MT-ND4LP03901 98 aa12.22□□□□□ -0.45
COL20A1-208ENST00000496810 IFITM2Q01629 132 aa12.22□□□□□ -0.45
COL20A1-208ENST00000496810 PRR3P79522 188 aaKnown RBP12.21□□□□□ -0.45
COL20A1-208ENST00000496810 MRPS36P82909 103 aaKnown RBP12.21□□□□□ -0.45
COL20A1-208ENST00000496810 SPAG11BQ08648 103 aa12.21□□□□□ -0.45
COL20A1-208ENST00000496810 C7orf33Q8WU49 177 aa12.21□□□□□ -0.45
COL20A1-208ENST00000496810 ANAPC16Q96DE5 110 aa12.21□□□□□ -0.45
COL20A1-208ENST00000496810 IGHV3OR16-9A0A0B4J2B5 98 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms