RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 SMIM2Q9BVW6 85 aa11.39□□□□□ -0.59
RHBDD3-207ENST00000496342 TRBV24-1A0A075B6N3 115 aa11.38□□□□□ -0.59
RHBDD3-207ENST00000496342 EPM2AB3EWF7 344 aa11.38□□□□□ -0.59
RHBDD3-207ENST00000496342 C15orf56Q8N910 161 aa11.38□□□□□ -0.59
RHBDD3-207ENST00000496342 TMEM101Q96IK0 257 aa11.38□□□□□ -0.59
RHBDD3-207ENST00000496342 KIR2DL4Q99706 377 aa11.38□□□□□ -0.59
RHBDD3-207ENST00000496342 hDV102S1A0JD36 115 aa11.37□□□□□ -0.59
RHBDD3-207ENST00000496342 MRPL52Q86TS9 123 aaKnown RBP11.37□□□□□ -0.59
RHBDD3-207ENST00000496342 C20orf78Q9BR46 151 aa11.37□□□□□ -0.59
RHBDD3-207ENST00000496342 TCAPO15273 167 aa11.36□□□□□ -0.59
RHBDD3-207ENST00000496342 XCL1P47992 114 aa11.36□□□□□ -0.59
RHBDD3-207ENST00000496342 RPL39P62891 51 aaKnown RBP11.36□□□□□ -0.59
RHBDD3-207ENST00000496342 HIGD2BQ4VC39 106 aa11.36□□□□□ -0.59
RHBDD3-207ENST00000496342 SCXQ7RTU7 201 aa11.36□□□□□ -0.59
RHBDD3-207ENST00000496342 CDC42SE2Q9NRR3 84 aa11.36□□□□□ -0.59
RHBDD3-207ENST00000496342 UBE2D4Q9Y2X8 147 aa11.36□□□□□ -0.59
RHBDD3-207ENST00000496342 LINC00959A0A1B0GUT2 108 aa11.35□□□□□ -0.59
RHBDD3-207ENST00000496342 CCL25O15444 150 aa11.35□□□□□ -0.59
RHBDD3-207ENST00000496342 SLPIP03973 132 aa11.35□□□□□ -0.59
RHBDD3-207ENST00000496342 FOXI1Q12951 378 aa11.35□□□□□ -0.59
RHBDD3-207ENST00000496342 TMEM136Q6ZRR5 245 aa11.35□□□□□ -0.59
RHBDD3-207ENST00000496342 Q6ZUT4 128 aa11.35□□□□□ -0.59
RHBDD3-207ENST00000496342 ORMDL3Q8N138 153 aa11.35□□□□□ -0.59
RHBDD3-207ENST00000496342 PRELID3AQ96N28 172 aa11.35□□□□□ -0.59
RHBDD3-207ENST00000496342 RPL32P62910 135 aaKnown RBP11.34□□□□□ -0.59
RHBDD3-207ENST00000496342 ZNF664Q8N3J9 261 aa11.34□□□□□ -0.59
RHBDD3-207ENST00000496342 FAT1Q14517 4588 aa11.34□□□□□ -0.59
RHBDD3-207ENST00000496342 PPBPP02775 128 aa11.33□□□□□ -0.6
RHBDD3-207ENST00000496342 DGAT2L7PQ6IED9 249 aa11.33□□□□□ -0.6
RHBDD3-207ENST00000496342 SEC11CQ9BY50 192 aa11.33□□□□□ -0.6
RHBDD3-207ENST00000496342 LOC389332A0A1B0GUA5 103 aa11.32□□□□□ -0.6
RHBDD3-207ENST00000496342 PANO1I0J062 215 aa11.32□□□□□ -0.6
RHBDD3-207ENST00000496342 PHOX2AO14813 284 aa11.32□□□□□ -0.6
RHBDD3-207ENST00000496342 C9orf163Q8N9P6 203 aa11.32□□□□□ -0.6
RHBDD3-207ENST00000496342 CLRN3Q8NCR9 226 aa11.32□□□□□ -0.6
RHBDD3-207ENST00000496342 FAM104AQ969W3 186 aa11.31□□□□□ -0.6
RHBDD3-207ENST00000496342 OPRPNQ99935 248 aaPredicted RBP11.31□□□□□ -0.6
RHBDD3-207ENST00000496342 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.31□□□□□ -0.6
RHBDD3-207ENST00000496342 CNBPP62633 177 aaKnown RBP11.3□□□□□ -0.6
RHBDD3-207ENST00000496342 CIRBP-AS1Q8TBR5 109 aa11.3□□□□□ -0.6
RHBDD3-207ENST00000496342 LINC00526Q96FQ7 95 aa11.3□□□□□ -0.6
RHBDD3-207ENST00000496342 TRAV13-1A0A0B4J241 112 aa11.29□□□□□ -0.6
RHBDD3-207ENST00000496342 SS18Q15532 418 aa11.29□□□□□ -0.6
RHBDD3-207ENST00000496342 LINC00528Q8N1L1 170 aa11.29□□□□□ -0.6
RHBDD3-207ENST00000496342 CHAC1Q9BUX1 264 aa11.29□□□□□ -0.6
RHBDD3-207ENST00000496342 CTDSP1Q9GZU7 261 aa11.29□□□□□ -0.6
RHBDD3-207ENST00000496342 AP5S1Q9NUS5 200 aa11.29□□□□□ -0.6
RHBDD3-207ENST00000496342 CSDC2Q9Y534 153 aaKnown RBP11.29□□□□□ -0.6
RHBDD3-207ENST00000496342 KIAA1644Q3SXP7 199 aa11.28□□□□□ -0.6
RHBDD3-207ENST00000496342 TMEM18Q96B42 140 aa11.28□□□□□ -0.6
RHBDD3-207ENST00000496342 IMMP2LQ96T52 175 aa11.28□□□□□ -0.6
RHBDD3-207ENST00000496342 TIMM21Q9BVV7 248 aa11.28□□□□□ -0.6
RHBDD3-207ENST00000496342 VPS13BQ7Z7G8 4022 aa11.27□□□□□ -0.6
RHBDD3-207ENST00000496342 C10orf91Q5T1B1 145 aa11.27□□□□□ -0.61
RHBDD3-207ENST00000496342 SDIM1Q6ZPB5 146 aa11.27□□□□□ -0.61
RHBDD3-207ENST00000496342 MAP1LC3AQ9H492 121 aa11.27□□□□□ -0.61
RHBDD3-207ENST00000496342 GVQW2A0A096LPI5 108 aaPredicted RBP11.26□□□□□ -0.61
RHBDD3-207ENST00000496342 FAM229AH3BQW9 127 aa11.26□□□□□ -0.61
RHBDD3-207ENST00000496342 CHTF8P0CG12 524 aa11.26□□□□□ -0.61
RHBDD3-207ENST00000496342 CFAP161Q6P656 301 aa11.26□□□□□ -0.61
RHBDD3-207ENST00000496342 CD164L2Q6UWJ8 174 aa11.26□□□□□ -0.61
RHBDD3-207ENST00000496342 CARHSP1Q9Y2V2 147 aaKnown RBP11.26□□□□□ -0.61
RHBDD3-207ENST00000496342 INAFM2P0DMQ5 153 aa11.25□□□□□ -0.61
RHBDD3-207ENST00000496342 RAB5AP20339 215 aa11.25□□□□□ -0.61
RHBDD3-207ENST00000496342 SMAGPQ0VAQ4 97 aa11.25□□□□□ -0.61
RHBDD3-207ENST00000496342 RPS10P5Q9NQ39 176 aa11.25□□□□□ -0.61
RHBDD3-207ENST00000496342 LAMTOR2Q9Y2Q5 125 aa11.25□□□□□ -0.61
RHBDD3-207ENST00000496342 PRSS47A8MTI9 375 aa11.24□□□□□ -0.61
RHBDD3-207ENST00000496342 Q8N8P6 123 aa11.24□□□□□ -0.61
RHBDD3-207ENST00000496342 SPANXA1Q9NS26 97 aa11.24□□□□□ -0.61
RHBDD3-207ENST00000496342 IGHV3-64A0A075B6Q5 118 aa11.23□□□□□ -0.61
RHBDD3-207ENST00000496342 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.23□□□□□ -0.61
RHBDD3-207ENST00000496342 IGHV1-58A0A0C4DH39 117 aa11.23□□□□□ -0.61
RHBDD3-207ENST00000496342 C1orf196B1AJZ1 125 aa11.23□□□□□ -0.61
RHBDD3-207ENST00000496342 C5orf38Q86SI9 138 aa11.23□□□□□ -0.61
RHBDD3-207ENST00000496342 TRAV9-1A0A075B6T8 112 aa11.22□□□□□ -0.61
RHBDD3-207ENST00000496342 S100PP25815 95 aa11.22□□□□□ -0.61
RHBDD3-207ENST00000496342 IFI27P40305 119 aaPredicted RBP11.22□□□□□ -0.61
RHBDD3-207ENST00000496342 ZC2HC1BQ5TFG8 222 aa11.22□□□□□ -0.61
RHBDD3-207ENST00000496342 IGLV4-3A0A075B6K6 122 aa11.21□□□□□ -0.61
RHBDD3-207ENST00000496342 IFITM10A6NMD0 228 aa11.21□□□□□ -0.61
RHBDD3-207ENST00000496342 MRPS36P82909 103 aaKnown RBP11.21□□□□□ -0.61
RHBDD3-207ENST00000496342 COX6A2Q02221 97 aa11.21□□□□□ -0.61
RHBDD3-207ENST00000496342 PRSS3P2Q8NHM4 247 aa11.21□□□□□ -0.61
RHBDD3-207ENST00000496342 COX7A2LO14548 114 aa11.2□□□□□ -0.62
RHBDD3-207ENST00000496342 RHEBQ15382 184 aa11.2□□□□□ -0.62
RHBDD3-207ENST00000496342 C2orf66Q6UXQ4 117 aa11.2□□□□□ -0.62
RHBDD3-207ENST00000496342 FLG2Q5D862 2391 aaPredicted RBP11.2□□□□□ -0.62
RHBDD3-207ENST00000496342 APOC3P02656 99 aa11.19□□□□□ -0.62
RHBDD3-207ENST00000496342 MALP21145 153 aa11.19□□□□□ -0.62
RHBDD3-207ENST00000496342 IGLV4-69A0A075B6H9 119 aa11.18□□□□□ -0.62
RHBDD3-207ENST00000496342 IGKV2-24A0A0C4DH68 120 aa11.18□□□□□ -0.62
RHBDD3-207ENST00000496342 KRTAP10-4P60372 401 aaPredicted RBP11.18□□□□□ -0.62
RHBDD3-207ENST00000496342 CIRBPQ14011 172 aaKnown RBP11.18□□□□□ -0.62
RHBDD3-207ENST00000496342 SPACA4Q8TDM5 124 aa11.18□□□□□ -0.62
RHBDD3-207ENST00000496342 CARD19Q96LW7 228 aa11.18□□□□□ -0.62
RHBDD3-207ENST00000496342 TGIF2-C20orf24A0A0A6YYL0 155 aa11.17□□□□□ -0.62
RHBDD3-207ENST00000496342 ZNF561-AS1K7EIQ3 104 aa11.17□□□□□ -0.62
RHBDD3-207ENST00000496342 PLA2G1BP04054 148 aaKnown RBP11.17□□□□□ -0.62
RHBDD3-207ENST00000496342 GNB1LQ9BYB4 327 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms