RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 C15orf56Q8N910 161 aa9.34□□□□□ -0.91
PDAP1-204ENST00000496335 CIRBP-AS1Q8TBR5 109 aa9.34□□□□□ -0.91
PDAP1-204ENST00000496335 D6R8Y8 96 aa9.33□□□□□ -0.92
PDAP1-204ENST00000496335 PPP1R2P9O14990 202 aa9.33□□□□□ -0.92
PDAP1-204ENST00000496335 S100A8P05109 93 aa9.33□□□□□ -0.92
PDAP1-204ENST00000496335 IFITM2Q01629 132 aa9.33□□□□□ -0.92
PDAP1-204ENST00000496335 MRPL52Q86TS9 123 aaKnown RBP9.33□□□□□ -0.92
PDAP1-204ENST00000496335 KIR2DL4Q99706 377 aa9.33□□□□□ -0.92
PDAP1-204ENST00000496335 CDC42SE2Q9NRR3 84 aa9.33□□□□□ -0.92
PDAP1-204ENST00000496335 TRBV24-1A0A075B6N3 115 aa9.32□□□□□ -0.92
PDAP1-204ENST00000496335 LINC00959A0A1B0GUT2 108 aa9.32□□□□□ -0.92
PDAP1-204ENST00000496335 F8W036 122 aa9.32□□□□□ -0.92
PDAP1-204ENST00000496335 TNFRSF6BO95407 300 aa9.32□□□□□ -0.92
PDAP1-204ENST00000496335 CNBPP62633 177 aaKnown RBP9.32□□□□□ -0.92
PDAP1-204ENST00000496335 SDIM1Q6ZPB5 146 aa9.32□□□□□ -0.92
PDAP1-204ENST00000496335 C20orf78Q9BR46 151 aa9.32□□□□□ -0.92
PDAP1-204ENST00000496335 PANO1I0J062 215 aa9.31□□□□□ -0.92
PDAP1-204ENST00000496335 CCL25O15444 150 aa9.31□□□□□ -0.92
PDAP1-204ENST00000496335 XCL1P47992 114 aa9.31□□□□□ -0.92
PDAP1-204ENST00000496335 PNRC1Q12796 327 aaPredicted RBP9.31□□□□□ -0.92
PDAP1-204ENST00000496335 FOXI1Q12951 378 aa9.31□□□□□ -0.92
PDAP1-204ENST00000496335 HIGD2BQ4VC39 106 aa9.31□□□□□ -0.92
PDAP1-204ENST00000496335 ZNF664Q8N3J9 261 aa9.31□□□□□ -0.92
PDAP1-204ENST00000496335 AP5S1Q9NUS5 200 aa9.31□□□□□ -0.92
PDAP1-204ENST00000496335 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.31□□□□□ -0.92
PDAP1-204ENST00000496335 MYCBP2O75592 4640 aa9.31□□□□□ -0.92
PDAP1-204ENST00000496335 NPYP01303 97 aa9.3□□□□□ -0.92
PDAP1-204ENST00000496335 MT-ND4LP03901 98 aa9.3□□□□□ -0.92
PDAP1-204ENST00000496335 CFAP161Q6P656 301 aa9.3□□□□□ -0.92
PDAP1-204ENST00000496335 ATP5L2Q7Z4Y8 100 aa9.3□□□□□ -0.92
PDAP1-204ENST00000496335 UBE2D4Q9Y2X8 147 aa9.3□□□□□ -0.92
PDAP1-204ENST00000496335 PLA2G1BP04054 148 aaKnown RBP9.29□□□□□ -0.92
PDAP1-204ENST00000496335 RPL32P62910 135 aaKnown RBP9.29□□□□□ -0.92
PDAP1-204ENST00000496335 RNASE13Q5GAN3 156 aaKnown RBP9.29□□□□□ -0.92
PDAP1-204ENST00000496335 ANAPC16Q96DE5 110 aa9.29□□□□□ -0.92
PDAP1-204ENST00000496335 SMIM2Q9BVW6 85 aa9.29□□□□□ -0.92
PDAP1-204ENST00000496335 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.28□□□□□ -0.92
PDAP1-204ENST00000496335 SS18Q15532 418 aa9.28□□□□□ -0.92
PDAP1-204ENST00000496335 DMBT1Q9UGM3 2413 aaPredicted RBP9.28□□□□□ -0.92
PDAP1-204ENST00000496335 IGHV3-64A0A075B6Q5 118 aa9.27□□□□□ -0.93
PDAP1-204ENST00000496335 TCAPO15273 167 aa9.27□□□□□ -0.93
PDAP1-204ENST00000496335 PPBPP02775 128 aa9.27□□□□□ -0.93
PDAP1-204ENST00000496335 ADCYAP1P18509 176 aa9.27□□□□□ -0.93
PDAP1-204ENST00000496335 RPL39P62891 51 aaKnown RBP9.27□□□□□ -0.93
PDAP1-204ENST00000496335 TMEM136Q6ZRR5 245 aa9.27□□□□□ -0.93
PDAP1-204ENST00000496335 PRELID3AQ96N28 172 aa9.27□□□□□ -0.93
PDAP1-204ENST00000496335 CSDC2Q9Y534 153 aaKnown RBP9.27□□□□□ -0.93
PDAP1-204ENST00000496335 HERC1Q15751 4861 aa9.26□□□□□ -0.93
PDAP1-204ENST00000496335 GVQW2A0A096LPI5 108 aaPredicted RBP9.26□□□□□ -0.93
PDAP1-204ENST00000496335 PHOX2AO14813 284 aa9.26□□□□□ -0.93
PDAP1-204ENST00000496335 CD164L2Q6UWJ8 174 aa9.26□□□□□ -0.93
PDAP1-204ENST00000496335 Q6ZUT4 128 aa9.26□□□□□ -0.93
PDAP1-204ENST00000496335 ORMDL3Q8N138 153 aa9.26□□□□□ -0.93
PDAP1-204ENST00000496335 TMEM18Q96B42 140 aa9.26□□□□□ -0.93
PDAP1-204ENST00000496335 LINC00526Q96FQ7 95 aa9.26□□□□□ -0.93
PDAP1-204ENST00000496335 TRAV13-1A0A0B4J241 112 aa9.25□□□□□ -0.93
PDAP1-204ENST00000496335 TMEM218A2RU14 115 aa9.25□□□□□ -0.93
PDAP1-204ENST00000496335 CHTF8P0CG12 524 aa9.25□□□□□ -0.93
PDAP1-204ENST00000496335 KRTAP10-4P60372 401 aaPredicted RBP9.25□□□□□ -0.93
PDAP1-204ENST00000496335 SMAGPQ0VAQ4 97 aa9.25□□□□□ -0.93
PDAP1-204ENST00000496335 UQCC3Q6UW78 93 aa9.25□□□□□ -0.93
PDAP1-204ENST00000496335 TIMM21Q9BVV7 248 aa9.25□□□□□ -0.93
PDAP1-204ENST00000496335 IGHV1-58A0A0C4DH39 117 aa9.24□□□□□ -0.93
PDAP1-204ENST00000496335 C1orf196B1AJZ1 125 aa9.24□□□□□ -0.93
PDAP1-204ENST00000496335 FAM104AQ969W3 186 aa9.24□□□□□ -0.93
PDAP1-204ENST00000496335 OPRPNQ99935 248 aaPredicted RBP9.24□□□□□ -0.93
PDAP1-204ENST00000496335 COX6A2Q02221 97 aa9.23□□□□□ -0.93
PDAP1-204ENST00000496335 CIRBPQ14011 172 aaKnown RBP9.23□□□□□ -0.93
PDAP1-204ENST00000496335 PRSS3P2Q8NHM4 247 aa9.23□□□□□ -0.93
PDAP1-204ENST00000496335 DPH3Q96FX2 82 aa9.23□□□□□ -0.93
PDAP1-204ENST00000496335 LOC389332A0A1B0GUA5 103 aa9.22□□□□□ -0.93
PDAP1-204ENST00000496335 RAB5AP20339 215 aa9.22□□□□□ -0.93
PDAP1-204ENST00000496335 A0A087WYN8 130 aa9.21□□□□□ -0.94
PDAP1-204ENST00000496335 COMMD7Q86VX2 200 aa9.21□□□□□ -0.94
PDAP1-204ENST00000496335 SPACA4Q8TDM5 124 aa9.21□□□□□ -0.94
PDAP1-204ENST00000496335 SPANXA1Q9NS26 97 aa9.21□□□□□ -0.94
PDAP1-204ENST00000496335 PRSS47A8MTI9 375 aa9.2□□□□□ -0.94
PDAP1-204ENST00000496335 ZNF561-AS1K7EIQ3 104 aa9.2□□□□□ -0.94
PDAP1-204ENST00000496335 COX7A2LO14548 114 aa9.2□□□□□ -0.94
PDAP1-204ENST00000496335 MALP21145 153 aa9.2□□□□□ -0.94
PDAP1-204ENST00000496335 C5orf38Q86SI9 138 aa9.2□□□□□ -0.94
PDAP1-204ENST00000496335 IGKV2-24A0A0C4DH68 120 aa9.19□□□□□ -0.94
PDAP1-204ENST00000496335 RPL37AP61513 92 aaKnown RBP9.19□□□□□ -0.94
PDAP1-204ENST00000496335 IMMP2LQ96T52 175 aa9.19□□□□□ -0.94
PDAP1-204ENST00000496335 SEC11CQ9BY50 192 aa9.19□□□□□ -0.94
PDAP1-204ENST00000496335 CTDSP1Q9GZU7 261 aa9.19□□□□□ -0.94
PDAP1-204ENST00000496335 MAP1LC3AQ9H492 121 aa9.19□□□□□ -0.94
PDAP1-204ENST00000496335 LAMTOR2Q9Y2Q5 125 aa9.19□□□□□ -0.94
PDAP1-204ENST00000496335 IGLV4-69A0A075B6H9 119 aa9.18□□□□□ -0.94
PDAP1-204ENST00000496335 MRPS36P82909 103 aaKnown RBP9.18□□□□□ -0.94
PDAP1-204ENST00000496335 SYCNQ0VAF6 134 aa9.18□□□□□ -0.94
PDAP1-204ENST00000496335 MAJINQ3KP22 176 aa9.18□□□□□ -0.94
PDAP1-204ENST00000496335 CARD19Q96LW7 228 aa9.18□□□□□ -0.94
PDAP1-204ENST00000496335 A0A096LNI7 61 aa9.17□□□□□ -0.94
PDAP1-204ENST00000496335 IFITM10A6NMD0 228 aa9.17□□□□□ -0.94
PDAP1-204ENST00000496335 KIAA1644Q3SXP7 199 aa9.17□□□□□ -0.94
PDAP1-204ENST00000496335 Q8N8P6 123 aa9.17□□□□□ -0.94
PDAP1-204ENST00000496335 LRP1Q07954 4544 aaKnown RBP9.17□□□□□ -0.94
PDAP1-204ENST00000496335 IFI27P40305 119 aaPredicted RBP9.16□□□□□ -0.94
PDAP1-204ENST00000496335 PLAC8Q9NZF1 115 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms