RNA–Protein interactions for RNA: ENST00000496332.5

THBS3-208, Transcript of thrombospondin 3, humanhuman

TSL 3

Gene THBS3, Length 839 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-208ENST00000496332 FLG2Q5D862 2391 aaPredicted RBP7.6□□□□□ -1.19
THBS3-208ENST00000496332 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.6□□□□□ -1.19
THBS3-208ENST00000496332 A0A1B0GW15 77 aa7.6□□□□□ -1.19
THBS3-208ENST00000496332 PANO1I0J062 215 aa7.6□□□□□ -1.19
THBS3-208ENST00000496332 MRPL51Q4U2R6 128 aaKnown RBP7.6□□□□□ -1.19
THBS3-208ENST00000496332 FAM104BQ5XKR9 115 aa7.6□□□□□ -1.19
THBS3-208ENST00000496332 DMBT1Q9UGM3 2413 aaPredicted RBP7.59□□□□□ -1.19
THBS3-208ENST00000496332 IGHV3-64A0A075B6Q5 118 aa7.59□□□□□ -1.19
THBS3-208ENST00000496332 C7orf77A4D0Y5 90 aa7.59□□□□□ -1.19
THBS3-208ENST00000496332 LINC00862A6NCI5 91 aa7.59□□□□□ -1.19
THBS3-208ENST00000496332 FCER1GP30273 86 aa7.59□□□□□ -1.19
THBS3-208ENST00000496332 SUMO2P61956 95 aaKnown RBP7.59□□□□□ -1.19
THBS3-208ENST00000496332 FOXI1Q12951 378 aa7.59□□□□□ -1.19
THBS3-208ENST00000496332 HIGD2BQ4VC39 106 aa7.59□□□□□ -1.19
THBS3-208ENST00000496332 MRPL52Q86TS9 123 aaKnown RBP7.59□□□□□ -1.19
THBS3-208ENST00000496332 CDC42SE2Q9NRR3 84 aa7.59□□□□□ -1.19
THBS3-208ENST00000496332 LINC00959A0A1B0GUT2 108 aa7.58□□□□□ -1.2
THBS3-208ENST00000496332 PPP1R2P9O14990 202 aa7.58□□□□□ -1.2
THBS3-208ENST00000496332 CCL25O15444 150 aa7.58□□□□□ -1.2
THBS3-208ENST00000496332 CKS2P33552 79 aa7.58□□□□□ -1.2
THBS3-208ENST00000496332 XCL1P47992 114 aa7.58□□□□□ -1.2
THBS3-208ENST00000496332 KRTAP10-4P60372 401 aaPredicted RBP7.58□□□□□ -1.2
THBS3-208ENST00000496332 MRPL54Q6P161 138 aaKnown RBP7.58□□□□□ -1.2
THBS3-208ENST00000496332 ZNF664Q8N3J9 261 aa7.58□□□□□ -1.2
THBS3-208ENST00000496332 KIR2DL4Q99706 377 aa7.58□□□□□ -1.2
THBS3-208ENST00000496332 HBBP68871 147 aa7.57□□□□□ -1.2
THBS3-208ENST00000496332 SS18Q15532 418 aa7.57□□□□□ -1.2
THBS3-208ENST00000496332 COMMD7Q86VX2 200 aa7.57□□□□□ -1.2
THBS3-208ENST00000496332 C20orf78Q9BR46 151 aa7.57□□□□□ -1.2
THBS3-208ENST00000496332 FAT3Q8TDW7 4589 aa7.57□□□□□ -1.2
THBS3-208ENST00000496332 LRP1Q07954 4544 aaKnown RBP7.57□□□□□ -1.2
THBS3-208ENST00000496332 TRBV24-1A0A075B6N3 115 aa7.56□□□□□ -1.2
THBS3-208ENST00000496332 GVQW2A0A096LPI5 108 aaPredicted RBP7.56□□□□□ -1.2
THBS3-208ENST00000496332 A0A1B0GXF2 115 aa7.56□□□□□ -1.2
THBS3-208ENST00000496332 F8W036 122 aa7.56□□□□□ -1.2
THBS3-208ENST00000496332 S100A8P05109 93 aa7.56□□□□□ -1.2
THBS3-208ENST00000496332 CIRBPQ14011 172 aaKnown RBP7.56□□□□□ -1.2
THBS3-208ENST00000496332 DPH3Q96FX2 82 aa7.56□□□□□ -1.2
THBS3-208ENST00000496332 D6R8Y8 96 aa7.55□□□□□ -1.2
THBS3-208ENST00000496332 J3QL48 77 aa7.55□□□□□ -1.2
THBS3-208ENST00000496332 TNFRSF6BO95407 300 aa7.55□□□□□ -1.2
THBS3-208ENST00000496332 CHTF8P0CG12 524 aa7.55□□□□□ -1.2
THBS3-208ENST00000496332 RPL37AP61513 92 aaKnown RBP7.55□□□□□ -1.2
THBS3-208ENST00000496332 SMAGPQ0VAQ4 97 aa7.55□□□□□ -1.2
THBS3-208ENST00000496332 UBE2D4Q9Y2X8 147 aa7.55□□□□□ -1.2
THBS3-208ENST00000496332 CSDC2Q9Y534 153 aaKnown RBP7.55□□□□□ -1.2
THBS3-208ENST00000496332 PKHD1L1Q86WI1 4243 aa7.54□□□□□ -1.2
THBS3-208ENST00000496332 IGHV1-58A0A0C4DH39 117 aa7.54□□□□□ -1.2
THBS3-208ENST00000496332 RPL32P62910 135 aaKnown RBP7.54□□□□□ -1.2
THBS3-208ENST00000496332 COX6A2Q02221 97 aa7.54□□□□□ -1.2
THBS3-208ENST00000496332 UQCC3Q6UW78 93 aa7.54□□□□□ -1.2
THBS3-208ENST00000496332 CD164L2Q6UWJ8 174 aa7.54□□□□□ -1.2
THBS3-208ENST00000496332 SLC7A5P1Q8MH63 180 aa7.54□□□□□ -1.2
THBS3-208ENST00000496332 SPACA4Q8TDM5 124 aa7.54□□□□□ -1.2
THBS3-208ENST00000496332 A0A087WYN8 130 aa7.53□□□□□ -1.2
THBS3-208ENST00000496332 KRTAP29-1A8MX34 341 aaPredicted RBP7.53□□□□□ -1.2
THBS3-208ENST00000496332 C1orf196B1AJZ1 125 aa7.53□□□□□ -1.2
THBS3-208ENST00000496332 RNASE13Q5GAN3 156 aaKnown RBP7.53□□□□□ -1.2
THBS3-208ENST00000496332 ATP5L2Q7Z4Y8 100 aa7.53□□□□□ -1.2
THBS3-208ENST00000496332 TMEM18Q96B42 140 aa7.53□□□□□ -1.2
THBS3-208ENST00000496332 SMIM2Q9BVW6 85 aa7.53□□□□□ -1.2
THBS3-208ENST00000496332 TCAPO15273 167 aa7.52□□□□□ -1.21
THBS3-208ENST00000496332 NPYP01303 97 aa7.52□□□□□ -1.21
THBS3-208ENST00000496332 PPBPP02775 128 aa7.52□□□□□ -1.21
THBS3-208ENST00000496332 PNRC1Q12796 327 aaPredicted RBP7.52□□□□□ -1.21
THBS3-208ENST00000496332 PRSS3P2Q8NHM4 247 aa7.52□□□□□ -1.21
THBS3-208ENST00000496332 LINC00526Q96FQ7 95 aa7.52□□□□□ -1.21
THBS3-208ENST00000496332 TIMM21Q9BVV7 248 aa7.52□□□□□ -1.21
THBS3-208ENST00000496332 TRAV13-1A0A0B4J241 112 aa7.51□□□□□ -1.21
THBS3-208ENST00000496332 PHOX2AO14813 284 aa7.51□□□□□ -1.21
THBS3-208ENST00000496332 MT-ND4LP03901 98 aa7.51□□□□□ -1.21
THBS3-208ENST00000496332 RPL39P62891 51 aaKnown RBP7.51□□□□□ -1.21
THBS3-208ENST00000496332 TMEM136Q6ZRR5 245 aa7.51□□□□□ -1.21
THBS3-208ENST00000496332 Q6ZUT4 128 aa7.51□□□□□ -1.21
THBS3-208ENST00000496332 ORMDL3Q8N138 153 aa7.51□□□□□ -1.21
THBS3-208ENST00000496332 ANAPC16Q96DE5 110 aa7.51□□□□□ -1.21
THBS3-208ENST00000496332 IGKV2-24A0A0C4DH68 120 aa7.5□□□□□ -1.21
THBS3-208ENST00000496332 ZNF561-AS1K7EIQ3 104 aa7.5□□□□□ -1.21
THBS3-208ENST00000496332 COX7A2LO14548 114 aa7.5□□□□□ -1.21
THBS3-208ENST00000496332 MALP21145 153 aa7.5□□□□□ -1.21
THBS3-208ENST00000496332 MAJINQ3KP22 176 aa7.5□□□□□ -1.21
THBS3-208ENST00000496332 PRELID3AQ96N28 172 aa7.5□□□□□ -1.21
THBS3-208ENST00000496332 PLAC8Q9NZF1 115 aa7.5□□□□□ -1.21
THBS3-208ENST00000496332 ATP6V1G1O75348 118 aa7.49□□□□□ -1.21
THBS3-208ENST00000496332 S100A1P23297 94 aa7.49□□□□□ -1.21
THBS3-208ENST00000496332 HNRNPA3P51991 378 aaKnown RBP7.49□□□□□ -1.21
THBS3-208ENST00000496332 FAM104AQ969W3 186 aa7.49□□□□□ -1.21
THBS3-208ENST00000496332 CARD19Q96LW7 228 aa7.49□□□□□ -1.21
THBS3-208ENST00000496332 IGLV4-69A0A075B6H9 119 aa7.48□□□□□ -1.21
THBS3-208ENST00000496332 A0A096LNI7 61 aa7.48□□□□□ -1.21
THBS3-208ENST00000496332 RAB5AP20339 215 aa7.48□□□□□ -1.21
THBS3-208ENST00000496332 SYCNQ0VAF6 134 aa7.48□□□□□ -1.21
THBS3-208ENST00000496332 C5orf38Q86SI9 138 aa7.48□□□□□ -1.21
THBS3-208ENST00000496332 OPRPNQ99935 248 aaPredicted RBP7.48□□□□□ -1.21
THBS3-208ENST00000496332 SPANXA1Q9NS26 97 aa7.48□□□□□ -1.21
THBS3-208ENST00000496332 OXTP01178 125 aa7.47□□□□□ -1.21
THBS3-208ENST00000496332 STPG4Q8N801 248 aa7.47□□□□□ -1.21
THBS3-208ENST00000496332 PKIGQ9Y2B9 76 aa7.47□□□□□ -1.21
THBS3-208ENST00000496332 LOC389332A0A1B0GUA5 103 aa7.46□□□□□ -1.22
THBS3-208ENST00000496332 TMEM218A2RU14 115 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms