RNA–Protein interactions for RNA: ENST00000494891.5

NEPRO-222, Transcript of nucleolus and neural progenitor protein, human

TSL 4

Gene NEPRO, Length 547 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEPRO-222	ENST00000494891	HERC1	Q15751	4861 aa		6.62	□□□□□ -1.35
NEPRO-222	ENST00000494891	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	6.62	□□□□□ -1.35
NEPRO-222	ENST00000494891	IGKV2-29	A2NJV5	120 aa	Predicted RBP	6.62	□□□□□ -1.35
NEPRO-222	ENST00000494891	KRTAP10-4	P60372	401 aa	Predicted RBP	6.62	□□□□□ -1.35
NEPRO-222	ENST00000494891	SUMO2	P61956	95 aa	Known RBP	6.62	□□□□□ -1.35
NEPRO-222	ENST00000494891	DEFB104A	Q8WTQ1	72 aa		6.62	□□□□□ -1.35
NEPRO-222	ENST00000494891	C20orf78	Q9BR46	151 aa		6.62	□□□□□ -1.35
NEPRO-222	ENST00000494891	FLG2	Q5D862	2391 aa	Predicted RBP	6.62	□□□□□ -1.35
NEPRO-222	ENST00000494891	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	6.61	□□□□□ -1.35
NEPRO-222	ENST00000494891		A0A1B0GXF2	115 aa		6.61	□□□□□ -1.35
NEPRO-222	ENST00000494891	C7orf77	A4D0Y5	90 aa		6.61	□□□□□ -1.35
NEPRO-222	ENST00000494891	TCAP	O15273	167 aa		6.61	□□□□□ -1.35
NEPRO-222	ENST00000494891	CCL25	O15444	150 aa		6.61	□□□□□ -1.35
NEPRO-222	ENST00000494891	S100A8	P05109	93 aa		6.61	□□□□□ -1.35
NEPRO-222	ENST00000494891	C15orf56	Q8N910	161 aa		6.61	□□□□□ -1.35
NEPRO-222	ENST00000494891	TMEM101	Q96IK0	257 aa		6.61	□□□□□ -1.35
NEPRO-222	ENST00000494891	BTF3L4	Q96K17	158 aa		6.61	□□□□□ -1.35
NEPRO-222	ENST00000494891	CDC42SE2	Q9NRR3	84 aa		6.61	□□□□□ -1.35
NEPRO-222	ENST00000494891	TMEM242	Q9NWH2	141 aa		6.61	□□□□□ -1.35
NEPRO-222	ENST00000494891	GVQW2	A0A096LPI5	108 aa	Predicted RBP	6.6	□□□□□ -1.35
NEPRO-222	ENST00000494891	hDV102S1	A0JD36	115 aa		6.6	□□□□□ -1.35
NEPRO-222	ENST00000494891	GAGE12H	A6NDE8	117 aa		6.6	□□□□□ -1.35
NEPRO-222	ENST00000494891	PHOX2A	O14813	284 aa		6.6	□□□□□ -1.35
NEPRO-222	ENST00000494891	SLPI	P03973	132 aa		6.6	□□□□□ -1.35
NEPRO-222	ENST00000494891	SMAGP	Q0VAQ4	97 aa		6.6	□□□□□ -1.35
NEPRO-222	ENST00000494891	PNRC1	Q12796	327 aa	Predicted RBP	6.6	□□□□□ -1.35
NEPRO-222	ENST00000494891	FOXI1	Q12951	378 aa		6.6	□□□□□ -1.35
NEPRO-222	ENST00000494891	MRPL51	Q4U2R6	128 aa	Known RBP	6.6	□□□□□ -1.35
NEPRO-222	ENST00000494891	RNASEK	Q6P5S7	137 aa	Known RBP	6.6	□□□□□ -1.35
NEPRO-222	ENST00000494891	ATP5L2	Q7Z4Y8	100 aa		6.6	□□□□□ -1.35
NEPRO-222	ENST00000494891	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	6.6	□□□□□ -1.35
NEPRO-222	ENST00000494891	KIR2DL4	Q99706	377 aa		6.6	□□□□□ -1.35
NEPRO-222	ENST00000494891	TIMM21	Q9BVV7	248 aa		6.6	□□□□□ -1.35
NEPRO-222	ENST00000494891	AP5S1	Q9NUS5	200 aa		6.6	□□□□□ -1.35
NEPRO-222	ENST00000494891	LINC00959	A0A1B0GUT2	108 aa		6.59	□□□□□ -1.35
NEPRO-222	ENST00000494891		F8W036	122 aa		6.59	□□□□□ -1.35
NEPRO-222	ENST00000494891	PPBP	P02775	128 aa		6.59	□□□□□ -1.35
NEPRO-222	ENST00000494891	HBB	P68871	147 aa		6.59	□□□□□ -1.35
NEPRO-222	ENST00000494891	ZNF664	Q8N3J9	261 aa		6.59	□□□□□ -1.35
NEPRO-222	ENST00000494891	IGHV3-64	A0A075B6Q5	118 aa		6.58	□□□□□ -1.36
NEPRO-222	ENST00000494891	SMKR1	H3BMG3	65 aa		6.58	□□□□□ -1.36
NEPRO-222	ENST00000494891	CAMP	P49913	170 aa		6.58	□□□□□ -1.36
NEPRO-222	ENST00000494891	RAB14	P61106	215 aa		6.58	□□□□□ -1.36
NEPRO-222	ENST00000494891	UBE2D4	Q9Y2X8	147 aa		6.58	□□□□□ -1.36
NEPRO-222	ENST00000494891	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	6.58	□□□□□ -1.36
NEPRO-222	ENST00000494891	FCER1G	P30273	86 aa		6.57	□□□□□ -1.36
NEPRO-222	ENST00000494891	CKS2	P33552	79 aa		6.57	□□□□□ -1.36
NEPRO-222	ENST00000494891	CLLU1	Q5K131	121 aa		6.57	□□□□□ -1.36
NEPRO-222	ENST00000494891	CD164L2	Q6UWJ8	174 aa		6.57	□□□□□ -1.36
NEPRO-222	ENST00000494891	TMEM18	Q96B42	140 aa		6.57	□□□□□ -1.36
NEPRO-222	ENST00000494891	IGKV3OR2-268	A0A0C4DH90	116 aa		6.56	□□□□□ -1.36
NEPRO-222	ENST00000494891	KRTAP29-1	A8MX34	341 aa	Predicted RBP	6.56	□□□□□ -1.36
NEPRO-222	ENST00000494891	C1orf196	B1AJZ1	125 aa		6.56	□□□□□ -1.36
NEPRO-222	ENST00000494891	PANO1	I0J062	215 aa		6.56	□□□□□ -1.36
NEPRO-222	ENST00000494891	TNFRSF6B	O95407	300 aa		6.56	□□□□□ -1.36
NEPRO-222	ENST00000494891	ODF1	Q14990	250 aa		6.56	□□□□□ -1.36
NEPRO-222	ENST00000494891	SS18	Q15532	418 aa		6.56	□□□□□ -1.36
NEPRO-222	ENST00000494891	SPACA4	Q8TDM5	124 aa		6.56	□□□□□ -1.36
NEPRO-222	ENST00000494891	SMIM2	Q9BVW6	85 aa		6.56	□□□□□ -1.36
NEPRO-222	ENST00000494891	IGHV1-58	A0A0C4DH39	117 aa		6.55	□□□□□ -1.36
NEPRO-222	ENST00000494891		D6R8Y8	96 aa		6.55	□□□□□ -1.36
NEPRO-222	ENST00000494891	MRPL54	Q6P161	138 aa	Known RBP	6.55	□□□□□ -1.36
NEPRO-222	ENST00000494891	PKIG	Q9Y2B9	76 aa		6.55	□□□□□ -1.36
NEPRO-222	ENST00000494891	LAMTOR2	Q9Y2Q5	125 aa		6.55	□□□□□ -1.36
NEPRO-222	ENST00000494891	PKHD1L1	Q86WI1	4243 aa		6.55	□□□□□ -1.36
NEPRO-222	ENST00000494891	NPY	P01303	97 aa		6.54	□□□□□ -1.36
NEPRO-222	ENST00000494891	MT-ND4L	P03901	98 aa		6.54	□□□□□ -1.36
NEPRO-222	ENST00000494891	XCL1	P47992	114 aa		6.54	□□□□□ -1.36
NEPRO-222	ENST00000494891	MRPS36	P82909	103 aa	Known RBP	6.54	□□□□□ -1.36
NEPRO-222	ENST00000494891	UQCC3	Q6UW78	93 aa		6.54	□□□□□ -1.36
NEPRO-222	ENST00000494891	ORMDL3	Q8N138	153 aa		6.54	□□□□□ -1.36
NEPRO-222	ENST00000494891	SPANXA1	Q9NS26	97 aa		6.54	□□□□□ -1.36
NEPRO-222	ENST00000494891	PLAC8	Q9NZF1	115 aa		6.54	□□□□□ -1.36
NEPRO-222	ENST00000494891	FAM104A	Q969W3	186 aa		6.53	□□□□□ -1.36
NEPRO-222	ENST00000494891	IMMP2L	Q96T52	175 aa		6.53	□□□□□ -1.36
NEPRO-222	ENST00000494891		A0A087WYN8	130 aa		6.52	□□□□□ -1.37
NEPRO-222	ENST00000494891	OXT	P01178	125 aa		6.52	□□□□□ -1.37
NEPRO-222	ENST00000494891	RPL37A	P61513	92 aa	Known RBP	6.52	□□□□□ -1.37
NEPRO-222	ENST00000494891	HIGD2B	Q4VC39	106 aa		6.52	□□□□□ -1.37
NEPRO-222	ENST00000494891	TMEM136	Q6ZRR5	245 aa		6.52	□□□□□ -1.37
NEPRO-222	ENST00000494891	LINC00474	Q9P2X8	69 aa		6.52	□□□□□ -1.37
NEPRO-222	ENST00000494891	PYGO1	Q9Y3Y4	419 aa		6.52	□□□□□ -1.37
NEPRO-222	ENST00000494891		K7EMI3	77 aa		6.51	□□□□□ -1.37
NEPRO-222	ENST00000494891	COX7A2L	O14548	114 aa		6.51	□□□□□ -1.37
NEPRO-222	ENST00000494891	COX6A2	Q02221	97 aa		6.51	□□□□□ -1.37
NEPRO-222	ENST00000494891		Q6ZUT4	128 aa		6.51	□□□□□ -1.37
NEPRO-222	ENST00000494891	PRSS3P2	Q8NHM4	247 aa		6.51	□□□□□ -1.37
NEPRO-222	ENST00000494891	PRELID3A	Q96N28	172 aa		6.51	□□□□□ -1.37
NEPRO-222	ENST00000494891	LRP1	Q07954	4544 aa	Known RBP	6.5	□□□□□ -1.37
NEPRO-222	ENST00000494891	TRAV9-1	A0A075B6T8	112 aa		6.5	□□□□□ -1.37
NEPRO-222	ENST00000494891		F8WDY8	70 aa		6.5	□□□□□ -1.37
NEPRO-222	ENST00000494891	ZNF561-AS1	K7EIQ3	104 aa		6.5	□□□□□ -1.37
NEPRO-222	ENST00000494891	CHTF8	P0CG12	524 aa		6.5	□□□□□ -1.37
NEPRO-222	ENST00000494891	RPL39	P62891	51 aa	Known RBP	6.5	□□□□□ -1.37
NEPRO-222	ENST00000494891	IFITM2	Q01629	132 aa		6.5	□□□□□ -1.37
NEPRO-222	ENST00000494891	C2orf48	Q96LS8	159 aa		6.5	□□□□□ -1.37
NEPRO-222	ENST00000494891	CARD19	Q96LW7	228 aa		6.5	□□□□□ -1.37
NEPRO-222	ENST00000494891	FAT3	Q8TDW7	4589 aa		6.5	□□□□□ -1.37
NEPRO-222	ENST00000494891	TRAV13-1	A0A0B4J241	112 aa		6.49	□□□□□ -1.37
NEPRO-222	ENST00000494891	IGHV3OR16-9	A0A0B4J2B5	98 aa		6.49	□□□□□ -1.37

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms