RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 IGKV2-24A0A0C4DH68 120 aa7.33□□□□□ -1.24
VTI1A-208ENST00000494728 A0A1B0GUT8 65 aa7.33□□□□□ -1.24
VTI1A-208ENST00000494728 H7C423 109 aa7.33□□□□□ -1.24
VTI1A-208ENST00000494728 RAB4AP20338 218 aa7.33□□□□□ -1.24
VTI1A-208ENST00000494728 PMCHP20382 165 aa7.33□□□□□ -1.24
VTI1A-208ENST00000494728 XCL1P47992 114 aa7.33□□□□□ -1.24
VTI1A-208ENST00000494728 POLR2KP53803 58 aaKnown RBP7.33□□□□□ -1.24
VTI1A-208ENST00000494728 TEX261Q6UWH6 196 aa7.33□□□□□ -1.24
VTI1A-208ENST00000494728 OR5A1Q8NGJ0 315 aa7.33□□□□□ -1.24
VTI1A-208ENST00000494728 TMEM191AQ9H0A3 160 aa7.33□□□□□ -1.24
VTI1A-208ENST00000494728 V9GYV3 84 aa7.33□□□□□ -1.24
VTI1A-208ENST00000494728 LINC00959A0A1B0GUT2 108 aa7.32□□□□□ -1.24
VTI1A-208ENST00000494728 ZNF727A8MUV8 499 aa7.32□□□□□ -1.24
VTI1A-208ENST00000494728 CCL25O15444 150 aa7.32□□□□□ -1.24
VTI1A-208ENST00000494728 ZNF25P17030 456 aaPredicted RBP7.32□□□□□ -1.24
VTI1A-208ENST00000494728 SERTAD4-AS1Q5TG53 156 aa7.32□□□□□ -1.24
VTI1A-208ENST00000494728 ST20Q9HBF5 79 aa7.32□□□□□ -1.24
VTI1A-208ENST00000494728 OSTCQ9NRP0 149 aa7.32□□□□□ -1.24
VTI1A-208ENST00000494728 TRBV27A0A0K0K1C4 114 aa7.31□□□□□ -1.24
VTI1A-208ENST00000494728 C9JQL5 133 aa7.31□□□□□ -1.24
VTI1A-208ENST00000494728 NDUFS6O75380 124 aaKnown RBP7.31□□□□□ -1.24
VTI1A-208ENST00000494728 NRACQ8N912 160 aa7.31□□□□□ -1.24
VTI1A-208ENST00000494728 NUP35Q8NFH5 326 aa7.31□□□□□ -1.24
VTI1A-208ENST00000494728 ISOC2Q96AB3 205 aa7.31□□□□□ -1.24
VTI1A-208ENST00000494728 MRAP2Q96G30 205 aa7.31□□□□□ -1.24
VTI1A-208ENST00000494728 SRSF3P84103 164 aaKnown RBP7.3□□□□□ -1.24
VTI1A-208ENST00000494728 ODF1Q14990 250 aa7.3□□□□□ -1.24
VTI1A-208ENST00000494728 MAJINQ3KP22 176 aa7.3□□□□□ -1.24
VTI1A-208ENST00000494728 RNASE13Q5GAN3 156 aaKnown RBP7.3□□□□□ -1.24
VTI1A-208ENST00000494728 CFAP161Q6P656 301 aa7.3□□□□□ -1.24
VTI1A-208ENST00000494728 MRPL52Q86TS9 123 aaKnown RBP7.3□□□□□ -1.24
VTI1A-208ENST00000494728 BORCS7Q96B45 105 aa7.3□□□□□ -1.24
VTI1A-208ENST00000494728 DPH3Q96FX2 82 aa7.3□□□□□ -1.24
VTI1A-208ENST00000494728 CDC42SE2Q9NRR3 84 aa7.3□□□□□ -1.24
VTI1A-208ENST00000494728 PLA2G2DQ9UNK4 145 aa7.3□□□□□ -1.24
VTI1A-208ENST00000494728 C7orf77A4D0Y5 90 aa7.29□□□□□ -1.24
VTI1A-208ENST00000494728 RPL23P62829 140 aaKnown RBP7.29□□□□□ -1.24
VTI1A-208ENST00000494728 PRR3P79522 188 aaKnown RBP7.29□□□□□ -1.24
VTI1A-208ENST00000494728 Q6ZRU5 148 aa7.29□□□□□ -1.24
VTI1A-208ENST00000494728 STPG4Q8N801 248 aa7.29□□□□□ -1.24
VTI1A-208ENST00000494728 MRPL51Q4U2R6 128 aaKnown RBP7.28□□□□□ -1.24
VTI1A-208ENST00000494728 ZNF664Q8N3J9 261 aa7.28□□□□□ -1.24
VTI1A-208ENST00000494728 TMEM101Q96IK0 257 aa7.28□□□□□ -1.24
VTI1A-208ENST00000494728 BTF3L4Q96K17 158 aa7.28□□□□□ -1.24
VTI1A-208ENST00000494728 IGHV1-58A0A0C4DH39 117 aa7.27□□□□□ -1.25
VTI1A-208ENST00000494728 Q6ZUT4 128 aa7.27□□□□□ -1.25
VTI1A-208ENST00000494728 FAM104AQ969W3 186 aa7.27□□□□□ -1.25
VTI1A-208ENST00000494728 CARD19Q96LW7 228 aa7.27□□□□□ -1.25
VTI1A-208ENST00000494728 UBE2D4Q9Y2X8 147 aa7.27□□□□□ -1.25
VTI1A-208ENST00000494728 SUMO2P61956 95 aaKnown RBP7.26□□□□□ -1.25
VTI1A-208ENST00000494728 RIGQ13278 110 aa7.26□□□□□ -1.25
VTI1A-208ENST00000494728 ADIRFQ15847 76 aa7.26□□□□□ -1.25
VTI1A-208ENST00000494728 CD164L2Q6UWJ8 174 aa7.26□□□□□ -1.25
VTI1A-208ENST00000494728 SMIM27A0A1W2PRY6 76 aa7.25□□□□□ -1.25
VTI1A-208ENST00000494728 RAB14P61106 215 aa7.25□□□□□ -1.25
VTI1A-208ENST00000494728 PEA15Q15121 130 aa7.25□□□□□ -1.25
VTI1A-208ENST00000494728 SS18Q15532 418 aa7.25□□□□□ -1.25
VTI1A-208ENST00000494728 TMEM241Q24JQ0 296 aa7.25□□□□□ -1.25
VTI1A-208ENST00000494728 FAM104BQ5XKR9 115 aa7.25□□□□□ -1.25
VTI1A-208ENST00000494728 C7orf33Q8WU49 177 aa7.25□□□□□ -1.25
VTI1A-208ENST00000494728 NAT8BQ9UHF3 227 aa7.25□□□□□ -1.25
VTI1A-208ENST00000494728 IGLV4-69A0A075B6H9 119 aa7.24□□□□□ -1.25
VTI1A-208ENST00000494728 VCYO14598 125 aa7.24□□□□□ -1.25
VTI1A-208ENST00000494728 FCER1GP30273 86 aa7.24□□□□□ -1.25
VTI1A-208ENST00000494728 CAMPP49913 170 aa7.24□□□□□ -1.25
VTI1A-208ENST00000494728 RPL39P62891 51 aaKnown RBP7.24□□□□□ -1.25
VTI1A-208ENST00000494728 SYCNQ0VAF6 134 aa7.24□□□□□ -1.25
VTI1A-208ENST00000494728 FAM74A3Q4VXF1 159 aa7.24□□□□□ -1.25
VTI1A-208ENST00000494728 TRAV13-1A0A0B4J241 112 aa7.23□□□□□ -1.25
VTI1A-208ENST00000494728 NAT8Q9UHE5 227 aa7.23□□□□□ -1.25
VTI1A-208ENST00000494728 CSDC2Q9Y534 153 aaKnown RBP7.23□□□□□ -1.25
VTI1A-208ENST00000494728 A0A1B0GXF2 115 aa7.22□□□□□ -1.25
VTI1A-208ENST00000494728 ZNF561-AS1K7EIQ3 104 aa7.22□□□□□ -1.25
VTI1A-208ENST00000494728 COX7A2LO14548 114 aa7.22□□□□□ -1.25
VTI1A-208ENST00000494728 PTTG1IPP53801 180 aa7.22□□□□□ -1.25
VTI1A-208ENST00000494728 MRPL54Q6P161 138 aaKnown RBP7.22□□□□□ -1.25
VTI1A-208ENST00000494728 C5orf38Q86SI9 138 aa7.22□□□□□ -1.25
VTI1A-208ENST00000494728 OPRPNQ99935 248 aaPredicted RBP7.22□□□□□ -1.25
VTI1A-208ENST00000494728 RNF213Q63HN8 5207 aa7.22□□□□□ -1.25
VTI1A-208ENST00000494728 TRBV24-1A0A075B6N3 115 aa7.21□□□□□ -1.26
VTI1A-208ENST00000494728 A0A0J9YXV3 536 aa7.21□□□□□ -1.26
VTI1A-208ENST00000494728 A0A1W2PNN7 141 aa7.21□□□□□ -1.26
VTI1A-208ENST00000494728 C1orf196B1AJZ1 125 aa7.21□□□□□ -1.26
VTI1A-208ENST00000494728 D6R8Y8 96 aa7.21□□□□□ -1.26
VTI1A-208ENST00000494728 TNFRSF6BO95407 300 aa7.21□□□□□ -1.26
VTI1A-208ENST00000494728 NPYP01303 97 aa7.21□□□□□ -1.26
VTI1A-208ENST00000494728 KIR2DL4Q99706 377 aa7.21□□□□□ -1.26
VTI1A-208ENST00000494728 SMIM2Q9BVW6 85 aa7.21□□□□□ -1.26
VTI1A-208ENST00000494728 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.2□□□□□ -1.26
VTI1A-208ENST00000494728 PPP1R2P9O14990 202 aa7.2□□□□□ -1.26
VTI1A-208ENST00000494728 MALP21145 153 aa7.2□□□□□ -1.26
VTI1A-208ENST00000494728 RPL32P62910 135 aaKnown RBP7.2□□□□□ -1.26
VTI1A-208ENST00000494728 GAGE2BQ13066 116 aa7.2□□□□□ -1.26
VTI1A-208ENST00000494728 LINC01600Q96MT4 127 aa7.2□□□□□ -1.26
VTI1A-208ENST00000494728 C20orf78Q9BR46 151 aa7.2□□□□□ -1.26
VTI1A-208ENST00000494728 TIMM21Q9BVV7 248 aa7.2□□□□□ -1.26
VTI1A-208ENST00000494728 SMDT1Q9H4I9 107 aa7.2□□□□□ -1.26
VTI1A-208ENST00000494728 LINC00474Q9P2X8 69 aa7.2□□□□□ -1.26
VTI1A-208ENST00000494728 LOC107984640A0A0U1RRK4 108 aa7.19□□□□□ -1.26
VTI1A-208ENST00000494728 TCAPO15273 167 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms