RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 GEMIN7Q9H840 131 aaKnown RBP7.78□□□□□ -1.16
PDLIM1-205ENST00000493949 MDFICQ9P1T7 246 aa7.78□□□□□ -1.16
PDLIM1-205ENST00000493949 LOC107984156A0A0G2JMH3 177 aa7.77□□□□□ -1.17
PDLIM1-205ENST00000493949 CRYGDP07320 174 aa7.77□□□□□ -1.17
PDLIM1-205ENST00000493949 MGPP08493 103 aa7.77□□□□□ -1.17
PDLIM1-205ENST00000493949 SCGB1C2P0DMR2 95 aa7.77□□□□□ -1.17
PDLIM1-205ENST00000493949 RNASE3P12724 160 aaKnown RBP7.77□□□□□ -1.17
PDLIM1-205ENST00000493949 LGALS3P17931 250 aaKnown RBP7.77□□□□□ -1.17
PDLIM1-205ENST00000493949 RNASE4P34096 147 aaKnown RBP7.77□□□□□ -1.17
PDLIM1-205ENST00000493949 PSMB2P49721 201 aa7.77□□□□□ -1.17
PDLIM1-205ENST00000493949 ANXA2RQ3ZCQ2 193 aa7.77□□□□□ -1.17
PDLIM1-205ENST00000493949 PRR9Q5T870 116 aa7.77□□□□□ -1.17
PDLIM1-205ENST00000493949 ARL17AQ8IVW1 177 aa7.77□□□□□ -1.17
PDLIM1-205ENST00000493949 C14orf178Q8N769 122 aaPredicted RBP7.77□□□□□ -1.17
PDLIM1-205ENST00000493949 RNF152Q8N8N0 203 aa7.77□□□□□ -1.17
PDLIM1-205ENST00000493949 TP53TG1Q9Y2A0 90 aa7.77□□□□□ -1.17
PDLIM1-205ENST00000493949 A8MZ25 164 aa7.76□□□□□ -1.17
PDLIM1-205ENST00000493949 J3QQQ9 107 aa7.76□□□□□ -1.17
PDLIM1-205ENST00000493949 RPL13AP40429 203 aaKnown RBP7.76□□□□□ -1.17
PDLIM1-205ENST00000493949 LINC00315P59091 139 aa7.76□□□□□ -1.17
PDLIM1-205ENST00000493949 FAM159AQ6UWV7 190 aa7.76□□□□□ -1.17
PDLIM1-205ENST00000493949 TRPT1Q86TN4 253 aaKnown RBP7.76□□□□□ -1.17
PDLIM1-205ENST00000493949 RPL39LQ96EH5 51 aaKnown RBP7.76□□□□□ -1.17
PDLIM1-205ENST00000493949 KRTAP9-9Q9BYP9 154 aa7.76□□□□□ -1.17
PDLIM1-205ENST00000493949 KRTAP9-4Q9BYQ2 154 aa7.76□□□□□ -1.17
PDLIM1-205ENST00000493949 ERG28Q9UKR5 140 aa7.76□□□□□ -1.17
PDLIM1-205ENST00000493949 LINC01548A6NM66 108 aa7.75□□□□□ -1.17
PDLIM1-205ENST00000493949 DUSP14O95147 198 aaKnown RBP7.75□□□□□ -1.17
PDLIM1-205ENST00000493949 CFC1BP0CG36 223 aa7.75□□□□□ -1.17
PDLIM1-205ENST00000493949 CFC1P0CG37 223 aa7.75□□□□□ -1.17
PDLIM1-205ENST00000493949 FHL3Q13643 280 aa7.75□□□□□ -1.17
PDLIM1-205ENST00000493949 ATXN8Q156A1 80 aa7.75□□□□□ -1.17
PDLIM1-205ENST00000493949 PIK3CD-AS1Q5SR53 167 aa7.75□□□□□ -1.17
PDLIM1-205ENST00000493949 PYGO1Q9Y3Y4 419 aa7.75□□□□□ -1.17
PDLIM1-205ENST00000493949 PKHD1P08F94 4074 aa7.74□□□□□ -1.17
PDLIM1-205ENST00000493949 TRBV30A0A0K0K1B3 111 aa7.74□□□□□ -1.17
PDLIM1-205ENST00000493949 FAM240AA0A1B0GVK7 77 aa7.74□□□□□ -1.17
PDLIM1-205ENST00000493949 M0R2P5 195 aa7.74□□□□□ -1.17
PDLIM1-205ENST00000493949 TCL1BO95988 128 aa7.74□□□□□ -1.17
PDLIM1-205ENST00000493949 SUMO4Q6EEV6 95 aa7.74□□□□□ -1.17
PDLIM1-205ENST00000493949 C20orf173Q96LM9 149 aa7.74□□□□□ -1.17
PDLIM1-205ENST00000493949 C9orf85Q96MD7 179 aa7.74□□□□□ -1.17
PDLIM1-205ENST00000493949 KLK15Q9H2R5 256 aa7.74□□□□□ -1.17
PDLIM1-205ENST00000493949 DAZ1Q9NQZ3 744 aaKnown RBP7.74□□□□□ -1.17
PDLIM1-205ENST00000493949 C19orf73Q9NVV2 129 aa7.74□□□□□ -1.17
PDLIM1-205ENST00000493949 IGHV3-35A0A0C4DH35 117 aa7.73□□□□□ -1.17
PDLIM1-205ENST00000493949 TMEM223A0PJW6 202 aa7.73□□□□□ -1.17
PDLIM1-205ENST00000493949 H3BT86 120 aa7.73□□□□□ -1.17
PDLIM1-205ENST00000493949 SLC25A20O43772 301 aa7.73□□□□□ -1.17
PDLIM1-205ENST00000493949 TSHBP01222 138 aa7.73□□□□□ -1.17
PDLIM1-205ENST00000493949 IGHV3-33P01772 117 aa7.73□□□□□ -1.17
PDLIM1-205ENST00000493949 IGHG2P01859 326 aa7.73□□□□□ -1.17
PDLIM1-205ENST00000493949 AMELXQ99217 191 aa7.73□□□□□ -1.17
PDLIM1-205ENST00000493949 IGHV3-66A0A0C4DH42 116 aa7.72□□□□□ -1.17
PDLIM1-205ENST00000493949 A0A0J9YXY3 114 aa7.72□□□□□ -1.17
PDLIM1-205ENST00000493949 G3V318 75 aa7.72□□□□□ -1.17
PDLIM1-205ENST00000493949 TIMM17BO60830 172 aa7.72□□□□□ -1.17
PDLIM1-205ENST00000493949 LY6G6CO95867 125 aa7.72□□□□□ -1.17
PDLIM1-205ENST00000493949 TMEM170BQ5T4T1 132 aa7.72□□□□□ -1.17
PDLIM1-205ENST00000493949 ANKRD29Q8N6D5 301 aa7.72□□□□□ -1.17
PDLIM1-205ENST00000493949 TMEM263Q8WUH6 116 aaKnown RBP7.72□□□□□ -1.17
PDLIM1-205ENST00000493949 COPS9Q8WXC6 57 aa7.72□□□□□ -1.17
PDLIM1-205ENST00000493949 PTH2Q96A98 100 aa7.72□□□□□ -1.17
PDLIM1-205ENST00000493949 PPDPFQ9H3Y8 114 aa7.72□□□□□ -1.17
PDLIM1-205ENST00000493949 SPANXCQ9NY87 97 aa7.72□□□□□ -1.17
PDLIM1-205ENST00000493949 SELENOKQ9Y6D0 94 aa7.72□□□□□ -1.17
PDLIM1-205ENST00000493949 TRGV11A0A075B6L2 103 aa7.71□□□□□ -1.18
PDLIM1-205ENST00000493949 IGHV3OR16-8A0A075B7F1 116 aa7.71□□□□□ -1.18
PDLIM1-205ENST00000493949 COX6CP09669 75 aa7.71□□□□□ -1.18
PDLIM1-205ENST00000493949 IGHV4-30-4P0DP06 118 aa7.71□□□□□ -1.18
PDLIM1-205ENST00000493949 XGP55808 180 aa7.71□□□□□ -1.18
PDLIM1-205ENST00000493949 CARD19Q96LW7 228 aa7.71□□□□□ -1.18
PDLIM1-205ENST00000493949 DNAH6Q9C0G6 4158 aa7.7□□□□□ -1.18
PDLIM1-205ENST00000493949 TRBV10-2A0A0K0K1G8 114 aa7.7□□□□□ -1.18
PDLIM1-205ENST00000493949 I3L3M4 83 aa7.7□□□□□ -1.18
PDLIM1-205ENST00000493949 RHODO00212 210 aa7.7□□□□□ -1.18
PDLIM1-205ENST00000493949 SNCGO76070 127 aa7.7□□□□□ -1.18
PDLIM1-205ENST00000493949 PRB4P10163 310 aaPredicted RBP7.7□□□□□ -1.18
PDLIM1-205ENST00000493949 IFITM1P13164 125 aa7.7□□□□□ -1.18
PDLIM1-205ENST00000493949 Q8N1Y9 231 aa7.7□□□□□ -1.18
PDLIM1-205ENST00000493949 C20orf203Q8NBC4 194 aa7.7□□□□□ -1.18
PDLIM1-205ENST00000493949 ANAPC13Q9BS18 74 aa7.7□□□□□ -1.18
PDLIM1-205ENST00000493949 TRAV26-1A0A087WT03 109 aa7.69□□□□□ -1.18
PDLIM1-205ENST00000493949 IGHV3-16A0A0C4DH30 117 aa7.69□□□□□ -1.18
PDLIM1-205ENST00000493949 A4D1N5 150 aa7.69□□□□□ -1.18
PDLIM1-205ENST00000493949 M0QY20 66 aa7.69□□□□□ -1.18
PDLIM1-205ENST00000493949 IGLV1-40P01703 118 aa7.69□□□□□ -1.18
PDLIM1-205ENST00000493949 MT-ATP8P03928 68 aa7.69□□□□□ -1.18
PDLIM1-205ENST00000493949 GAGE5Q13069 117 aa7.69□□□□□ -1.18
PDLIM1-205ENST00000493949 GAGE6Q13070 117 aa7.69□□□□□ -1.18
PDLIM1-205ENST00000493949 LINC01620Q4KN68 170 aa7.69□□□□□ -1.18
PDLIM1-205ENST00000493949 KRTAP19-1Q8IUB9 90 aa7.69□□□□□ -1.18
PDLIM1-205ENST00000493949 C4orf3Q8WVX3 66 aa7.69□□□□□ -1.18
PDLIM1-205ENST00000493949 RHPN1-AS1Q9BWJ2 59 aa7.69□□□□□ -1.18
PDLIM1-205ENST00000493949 IGHV3OR16-13A0A075B7E8 117 aa7.68□□□□□ -1.18
PDLIM1-205ENST00000493949 IGHV3-74A0A0B4J1X5 117 aa7.68□□□□□ -1.18
PDLIM1-205ENST00000493949 KRTAP4-8A0A0G2JLE6 195 aa7.68□□□□□ -1.18
PDLIM1-205ENST00000493949 ELANEP08246 267 aa7.68□□□□□ -1.18
PDLIM1-205ENST00000493949 ZNF22P17026 224 aaPredicted RBP7.68□□□□□ -1.18
PDLIM1-205ENST00000493949 TSPEAR-AS2P59090 65 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms