RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 DEFB131BA0A096LNP1 70 aa14.94□□□□□ -0.02
RNF40-203ENST00000493683 PRR15LQ9BU68 103 aa14.94□□□□□ -0.02
RNF40-203ENST00000493683 CD164L2Q6UWJ8 174 aa14.94□□□□□ -0.02
RNF40-203ENST00000493683 WISP2O76076 250 aa14.94□□□□□ -0.02
RNF40-203ENST00000493683 TSHBP01222 138 aa14.94□□□□□ -0.02
RNF40-203ENST00000493683 MRPS12O15235 138 aaKnown RBP14.93□□□□□ -0.02
RNF40-203ENST00000493683 SLPIP03973 132 aa14.93□□□□□ -0.02
RNF40-203ENST00000493683 CCKP06307 115 aa14.93□□□□□ -0.02
RNF40-203ENST00000493683 SPTSSBQ8NFR3 76 aa14.93□□□□□ -0.02
RNF40-203ENST00000493683 WFDC11Q8NEX6 87 aa14.92□□□□□ -0.02
RNF40-203ENST00000493683 MRGPRG-AS1Q2M3A8 158 aa14.92□□□□□ -0.02
RNF40-203ENST00000493683 MRPL55Q7Z7F7 128 aaKnown RBP14.92□□□□□ -0.02
RNF40-203ENST00000493683 M0R378 163 aa14.91□□□□□ -0.02
RNF40-203ENST00000493683 COX17Q14061 63 aa14.91□□□□□ -0.02
RNF40-203ENST00000493683 C2orf91Q6ZV80 131 aa14.91□□□□□ -0.02
RNF40-203ENST00000493683 Q8N6K4 173 aa14.91□□□□□ -0.02
RNF40-203ENST00000493683 NDUFA7O95182 113 aa14.91□□□□□ -0.02
RNF40-203ENST00000493683 KLLNB2CW77 178 aa14.91□□□□□ -0.02
RNF40-203ENST00000493683 PSMG3-AS1Q96PY0 264 aa14.91□□□□□ -0.02
RNF40-203ENST00000493683 A0A087WZ39 114 aa14.9□□□□□ -0.02
RNF40-203ENST00000493683 C11orf71Q6IPW1 123 aa14.9□□□□□ -0.02
RNF40-203ENST00000493683 SHISA2Q6UWI4 295 aa14.9□□□□□ -0.02
RNF40-203ENST00000493683 TECTAO75443 2155 aa14.9□□□□□ -0.02
RNF40-203ENST00000493683 FAM19A3Q7Z5A8 133 aa14.9□□□□□ -0.02
RNF40-203ENST00000493683 MPLKIPQ8TAP9 179 aa14.9□□□□□ -0.02
RNF40-203ENST00000493683 POLR2KP53803 58 aaKnown RBP14.89□□□□□ -0.03
RNF40-203ENST00000493683 RNASE3P12724 160 aaKnown RBP14.89□□□□□ -0.03
RNF40-203ENST00000493683 C9orf85Q96MD7 179 aa14.89□□□□□ -0.03
RNF40-203ENST00000493683 ZNF706Q9Y5V0 76 aaPredicted RBP14.89□□□□□ -0.03
RNF40-203ENST00000493683 RBX1P62877 108 aa14.88□□□□□ -0.03
RNF40-203ENST00000493683 UBE2D4Q9Y2X8 147 aa14.88□□□□□ -0.03
RNF40-203ENST00000493683 ZNF106Q9H2Y7 1883 aaKnown RBP14.88□□□□□ -0.03
RNF40-203ENST00000493683 CNFNQ9BYD5 112 aa14.88□□□□□ -0.03
RNF40-203ENST00000493683 SCXQ7RTU7 201 aa14.88□□□□□ -0.03
RNF40-203ENST00000493683 TMEM131Q92545 1883 aa14.88□□□□□ -0.03
RNF40-203ENST00000493683 Q6ZSV7 163 aa14.87□□□□□ -0.03
RNF40-203ENST00000493683 PLA2G5P39877 138 aa14.87□□□□□ -0.03
RNF40-203ENST00000493683 KIF26AQ9ULI4 1882 aaPredicted RBP14.87□□□□□ -0.03
RNF40-203ENST00000493683 ADAMTS9Q9P2N4 1935 aa14.86□□□□□ -0.03
RNF40-203ENST00000493683 XAGE1AQ9HD64 81 aa14.86□□□□□ -0.03
RNF40-203ENST00000493683 OTOGLQ3ZCN5 2332 aa14.86□□□□□ -0.03
RNF40-203ENST00000493683 SORL1Q92673 2214 aa14.85□□□□□ -0.03
RNF40-203ENST00000493683 C19orf84I3L1E1 186 aa14.85□□□□□ -0.03
RNF40-203ENST00000493683 COX7CP15954 63 aa14.85□□□□□ -0.03
RNF40-203ENST00000493683 LELP1Q5T871 98 aa14.85□□□□□ -0.03
RNF40-203ENST00000493683 TRAV10A0A0B4J240 114 aa14.84□□□□□ -0.03
RNF40-203ENST00000493683 UBE2D1P51668 147 aa14.84□□□□□ -0.03
RNF40-203ENST00000493683 IGLV4-69A0A075B6H9 119 aa14.84□□□□□ -0.03
RNF40-203ENST00000493683 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.84□□□□□ -0.03
RNF40-203ENST00000493683 C1orf158Q8N1D5 194 aa14.84□□□□□ -0.03
RNF40-203ENST00000493683 Q6JHZ5 121 aa14.84□□□□□ -0.03
RNF40-203ENST00000493683 Q6Q795 121 aa14.84□□□□□ -0.03
RNF40-203ENST00000493683 Q6ZQY7 126 aa14.84□□□□□ -0.03
RNF40-203ENST00000493683 FAM19A5Q7Z5A7 132 aaPredicted RBP14.84□□□□□ -0.03
RNF40-203ENST00000493683 Q8N976 141 aa14.83□□□□□ -0.04
RNF40-203ENST00000493683 LINC00959A0A1B0GUT2 108 aa14.83□□□□□ -0.04
RNF40-203ENST00000493683 WFDC10BQ8IUB3 73 aa14.83□□□□□ -0.04
RNF40-203ENST00000493683 MYO18BQ8IUG5 2567 aa14.82□□□□□ -0.04
RNF40-203ENST00000493683 PTPN13Q12923 2485 aa14.82□□□□□ -0.04
RNF40-203ENST00000493683 PROK1P58294 105 aa14.82□□□□□ -0.04
RNF40-203ENST00000493683 Q8IZM0 81 aa14.81□□□□□ -0.04
RNF40-203ENST00000493683 C22orf34Q6ZV56 151 aa14.81□□□□□ -0.04
RNF40-203ENST00000493683 ZNF702PQ9H963 129 aa14.81□□□□□ -0.04
RNF40-203ENST00000493683 FREM1Q5H8C1 2179 aa14.81□□□□□ -0.04
RNF40-203ENST00000493683 C7orf33Q8WU49 177 aa14.8□□□□□ -0.04
RNF40-203ENST00000493683 BBC3Q96PG8 261 aaPredicted RBP14.8□□□□□ -0.04
RNF40-203ENST00000493683 SMIM11BQ8TCY0 68 aa14.8□□□□□ -0.04
RNF40-203ENST00000493683 A0A096LNI7 61 aa14.8□□□□□ -0.04
RNF40-203ENST00000493683 IGLV1-40P01703 118 aa14.8□□□□□ -0.04
RNF40-203ENST00000493683 NCOA6Q14686 2063 aaPredicted RBP14.79□□□□□ -0.04
RNF40-203ENST00000493683 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.79□□□□□ -0.04
RNF40-203ENST00000493683 C11orf21Q9P2W6 132 aa14.79□□□□□ -0.04
RNF40-203ENST00000493683 PRR9Q5T870 116 aa14.78□□□□□ -0.04
RNF40-203ENST00000493683 LOC107984640A0A0U1RRK4 108 aa14.77□□□□□ -0.04
RNF40-203ENST00000493683 INAFM1C9JVW0 142 aa14.77□□□□□ -0.04
RNF40-203ENST00000493683 C3orf84H3BNL1 204 aa14.77□□□□□ -0.04
RNF40-203ENST00000493683 ZNF73O43830 326 aaPredicted RBP14.76□□□□□ -0.05
RNF40-203ENST00000493683 DCANP1Q8TF63 244 aa14.76□□□□□ -0.05
RNF40-203ENST00000493683 UBE2D3P61077 147 aa14.76□□□□□ -0.05
RNF40-203ENST00000493683 UBE2D2P62837 147 aa14.76□□□□□ -0.05
RNF40-203ENST00000493683 LTBP2Q14767 1821 aa14.76□□□□□ -0.05
RNF40-203ENST00000493683 ALPK3Q96L96 1907 aa14.75□□□□□ -0.05
RNF40-203ENST00000493683 A8MZ25 164 aa14.75□□□□□ -0.05
RNF40-203ENST00000493683 Q8N9L7 120 aa14.75□□□□□ -0.05
RNF40-203ENST00000493683 IGIPA6NJ69 53 aa14.74□□□□□ -0.05
RNF40-203ENST00000493683 KIAA1549LQ6ZVL6 1849 aa14.74□□□□□ -0.05
RNF40-203ENST00000493683 CDC42SE2Q9NRR3 84 aa14.74□□□□□ -0.05
RNF40-203ENST00000493683 ARHGAP21Q5T5U3 1957 aa14.74□□□□□ -0.05
RNF40-203ENST00000493683 XGP55808 180 aa14.73□□□□□ -0.05
RNF40-203ENST00000493683 Q6ZS46 218 aa14.73□□□□□ -0.05
RNF40-203ENST00000493683 LINC00482Q8N8I6 264 aa14.73□□□□□ -0.05
RNF40-203ENST00000493683 C2orf16Q68DN1 1984 aa14.73□□□□□ -0.05
RNF40-203ENST00000493683 NAV3Q8IVL0 2385 aa14.72□□□□□ -0.05
RNF40-203ENST00000493683 LINC00474Q9P2X8 69 aa14.72□□□□□ -0.05
RNF40-203ENST00000493683 PRR14LQ5THK1 2151 aa14.72□□□□□ -0.05
RNF40-203ENST00000493683 IGKV2-28A0A075B6P5 120 aa14.72□□□□□ -0.05
RNF40-203ENST00000493683 IGKV2D-28P01615 120 aa14.72□□□□□ -0.05
RNF40-203ENST00000493683 KPRPQ5T749 579 aaPredicted RBP14.72□□□□□ -0.05
RNF40-203ENST00000493683 CHCHD7Q9BUK0 85 aa14.71□□□□□ -0.06
RNF40-203ENST00000493683 C10orf99Q6UWK7 81 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms