RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 hDV102S1A0JD36 115 aa6.88□□□□□ -1.31
COL6A3-214ENST00000493608 FAM231BA6NCW3 169 aa6.88□□□□□ -1.31
COL6A3-214ENST00000493608 I3L3M4 83 aa6.88□□□□□ -1.31
COL6A3-214ENST00000493608 FGF6P10767 208 aa6.88□□□□□ -1.31
COL6A3-214ENST00000493608 RPS10P46783 165 aaKnown RBP6.88□□□□□ -1.31
COL6A3-214ENST00000493608 DGAT2L7PQ6IED9 249 aa6.88□□□□□ -1.31
COL6A3-214ENST00000493608 NUP35Q8NFH5 326 aa6.88□□□□□ -1.31
COL6A3-214ENST00000493608 ST20Q9HBF5 79 aa6.88□□□□□ -1.31
COL6A3-214ENST00000493608 TRBV6-5A0A0K0K1A5 114 aa6.87□□□□□ -1.31
COL6A3-214ENST00000493608 GAGE12HA6NDE8 117 aa6.87□□□□□ -1.31
COL6A3-214ENST00000493608 NCR2O95944 276 aa6.87□□□□□ -1.31
COL6A3-214ENST00000493608 RIGQ13278 110 aa6.87□□□□□ -1.31
COL6A3-214ENST00000493608 PEA15Q15121 130 aa6.87□□□□□ -1.31
COL6A3-214ENST00000493608 FAM74A3Q4VXF1 159 aa6.87□□□□□ -1.31
COL6A3-214ENST00000493608 C9orf163Q8N9P6 203 aa6.87□□□□□ -1.31
COL6A3-214ENST00000493608 TMEM242Q9NWH2 141 aa6.87□□□□□ -1.31
COL6A3-214ENST00000493608 NAT8Q9UHE5 227 aa6.87□□□□□ -1.31
COL6A3-214ENST00000493608 PANO1I0J062 215 aa6.86□□□□□ -1.31
COL6A3-214ENST00000493608 TSHBP01222 138 aa6.86□□□□□ -1.31
COL6A3-214ENST00000493608 SLPIP03973 132 aa6.86□□□□□ -1.31
COL6A3-214ENST00000493608 CLRN3Q8NCR9 226 aa6.86□□□□□ -1.31
COL6A3-214ENST00000493608 DMBT1Q9UGM3 2413 aaPredicted RBP6.85□□□□□ -1.31
COL6A3-214ENST00000493608 POLR2KP53803 58 aaKnown RBP6.85□□□□□ -1.31
COL6A3-214ENST00000493608 SDIM1Q6ZPB5 146 aa6.85□□□□□ -1.31
COL6A3-214ENST00000493608 CHCHD10Q8WYQ3 142 aaPredicted RBP6.85□□□□□ -1.31
COL6A3-214ENST00000493608 MRAP2Q96G30 205 aa6.85□□□□□ -1.31
COL6A3-214ENST00000493608 NAT8BQ9UHF3 227 aa6.85□□□□□ -1.31
COL6A3-214ENST00000493608 MYCBP2O75592 4640 aa6.85□□□□□ -1.31
COL6A3-214ENST00000493608 H7C423 109 aa6.84□□□□□ -1.31
COL6A3-214ENST00000493608 ESDP10768 282 aa6.84□□□□□ -1.31
COL6A3-214ENST00000493608 CAMPP49913 170 aa6.84□□□□□ -1.31
COL6A3-214ENST00000493608 HIGD2BQ4VC39 106 aa6.84□□□□□ -1.31
COL6A3-214ENST00000493608 C15orf56Q8N910 161 aa6.84□□□□□ -1.31
COL6A3-214ENST00000493608 BTF3L4Q96K17 158 aa6.84□□□□□ -1.31
COL6A3-214ENST00000493608 SMIM27A0A1W2PRY6 76 aa6.83□□□□□ -1.32
COL6A3-214ENST00000493608 CNBPP62633 177 aaKnown RBP6.83□□□□□ -1.32
COL6A3-214ENST00000493608 MRPL51Q4U2R6 128 aaKnown RBP6.83□□□□□ -1.32
COL6A3-214ENST00000493608 NRACQ8N912 160 aa6.83□□□□□ -1.32
COL6A3-214ENST00000493608 OR5A1Q8NGJ0 315 aa6.83□□□□□ -1.32
COL6A3-214ENST00000493608 DPH3Q96FX2 82 aa6.83□□□□□ -1.32
COL6A3-214ENST00000493608 TMEM101Q96IK0 257 aa6.83□□□□□ -1.32
COL6A3-214ENST00000493608 IGHV3-64A0A075B6Q5 118 aa6.82□□□□□ -1.32
COL6A3-214ENST00000493608 TRBV27A0A0K0K1C4 114 aa6.82□□□□□ -1.32
COL6A3-214ENST00000493608 LINC00959A0A1B0GUT2 108 aa6.82□□□□□ -1.32
COL6A3-214ENST00000493608 VCYO14598 125 aa6.82□□□□□ -1.32
COL6A3-214ENST00000493608 CHTF8P0CG12 524 aa6.82□□□□□ -1.32
COL6A3-214ENST00000493608 XCL1P47992 114 aa6.82□□□□□ -1.32
COL6A3-214ENST00000493608 KRTAP10-4P60372 401 aaPredicted RBP6.82□□□□□ -1.32
COL6A3-214ENST00000493608 FAM104BQ5XKR9 115 aa6.82□□□□□ -1.32
COL6A3-214ENST00000493608 MRPL54Q6P161 138 aaKnown RBP6.82□□□□□ -1.32
COL6A3-214ENST00000493608 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.81□□□□□ -1.32
COL6A3-214ENST00000493608 C7orf77A4D0Y5 90 aa6.81□□□□□ -1.32
COL6A3-214ENST00000493608 CCL25O15444 150 aa6.81□□□□□ -1.32
COL6A3-214ENST00000493608 ZNF25P17030 456 aaPredicted RBP6.81□□□□□ -1.32
COL6A3-214ENST00000493608 FCER1GP30273 86 aa6.81□□□□□ -1.32
COL6A3-214ENST00000493608 SUMO2P61956 95 aaKnown RBP6.81□□□□□ -1.32
COL6A3-214ENST00000493608 FOXI1Q12951 378 aa6.81□□□□□ -1.32
COL6A3-214ENST00000493608 RNASE13Q5GAN3 156 aaKnown RBP6.81□□□□□ -1.32
COL6A3-214ENST00000493608 CFAP161Q6P656 301 aa6.81□□□□□ -1.32
COL6A3-214ENST00000493608 LINC00526Q96FQ7 95 aa6.81□□□□□ -1.32
COL6A3-214ENST00000493608 SMDT1Q9H4I9 107 aa6.81□□□□□ -1.32
COL6A3-214ENST00000493608 CDC42SE2Q9NRR3 84 aa6.81□□□□□ -1.32
COL6A3-214ENST00000493608 CKS2P33552 79 aa6.8□□□□□ -1.32
COL6A3-214ENST00000493608 ZNF664Q8N3J9 261 aa6.8□□□□□ -1.32
COL6A3-214ENST00000493608 HERC1Q15751 4861 aa6.79□□□□□ -1.32
COL6A3-214ENST00000493608 PPP1R17O96001 155 aa6.79□□□□□ -1.32
COL6A3-214ENST00000493608 RPL37AP61513 92 aaKnown RBP6.79□□□□□ -1.32
COL6A3-214ENST00000493608 COX6A2Q02221 97 aa6.79□□□□□ -1.32
COL6A3-214ENST00000493608 SS18Q15532 418 aa6.79□□□□□ -1.32
COL6A3-214ENST00000493608 KRTAP5-3Q6L8H2 238 aa6.79□□□□□ -1.32
COL6A3-214ENST00000493608 MRPL52Q86TS9 123 aaKnown RBP6.79□□□□□ -1.32
COL6A3-214ENST00000493608 KIR2DL4Q99706 377 aa6.79□□□□□ -1.32
COL6A3-214ENST00000493608 A0A087WYN8 130 aa6.78□□□□□ -1.32
COL6A3-214ENST00000493608 A0A1B0GW15 77 aa6.78□□□□□ -1.32
COL6A3-214ENST00000493608 D6R8Y8 96 aa6.78□□□□□ -1.32
COL6A3-214ENST00000493608 TNFRSF6BO95407 300 aa6.78□□□□□ -1.32
COL6A3-214ENST00000493608 HBBP68871 147 aa6.78□□□□□ -1.32
COL6A3-214ENST00000493608 PRSS3P2Q8NHM4 247 aa6.78□□□□□ -1.32
COL6A3-214ENST00000493608 UBE2D4Q9Y2X8 147 aa6.78□□□□□ -1.32
COL6A3-214ENST00000493608 GVQW2A0A096LPI5 108 aaPredicted RBP6.77□□□□□ -1.33
COL6A3-214ENST00000493608 IGKV2-24A0A0C4DH68 120 aa6.77□□□□□ -1.33
COL6A3-214ENST00000493608 A0A1B0GXF2 115 aa6.77□□□□□ -1.33
COL6A3-214ENST00000493608 LINC00862A6NCI5 91 aa6.77□□□□□ -1.33
COL6A3-214ENST00000493608 PPP1R2P9O14990 202 aa6.77□□□□□ -1.33
COL6A3-214ENST00000493608 HNRNPA3P51991 378 aaKnown RBP6.77□□□□□ -1.33
COL6A3-214ENST00000493608 RPL39P62891 51 aaKnown RBP6.77□□□□□ -1.33
COL6A3-214ENST00000493608 CIRBPQ14011 172 aaKnown RBP6.77□□□□□ -1.33
COL6A3-214ENST00000493608 TRBV24-1A0A075B6N3 115 aa6.76□□□□□ -1.33
COL6A3-214ENST00000493608 TRAV13-1A0A0B4J241 112 aa6.76□□□□□ -1.33
COL6A3-214ENST00000493608 IGHV1-58A0A0C4DH39 117 aa6.76□□□□□ -1.33
COL6A3-214ENST00000493608 KRTAP29-1A8MX34 341 aaPredicted RBP6.76□□□□□ -1.33
COL6A3-214ENST00000493608 F8W036 122 aa6.76□□□□□ -1.33
COL6A3-214ENST00000493608 TCAPO15273 167 aa6.76□□□□□ -1.33
COL6A3-214ENST00000493608 NPYP01303 97 aa6.76□□□□□ -1.33
COL6A3-214ENST00000493608 RAB14P61106 215 aa6.76□□□□□ -1.33
COL6A3-214ENST00000493608 MAJINQ3KP22 176 aa6.76□□□□□ -1.33
COL6A3-214ENST00000493608 CD164L2Q6UWJ8 174 aa6.76□□□□□ -1.33
COL6A3-214ENST00000493608 Q6ZUT4 128 aa6.76□□□□□ -1.33
COL6A3-214ENST00000493608 SPACA4Q8TDM5 124 aa6.76□□□□□ -1.33
COL6A3-214ENST00000493608 C20orf78Q9BR46 151 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms