RNA–Protein interactions for RNA: ENST00000492512.1

GPNMB-213, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-213ENST00000492512 SRP19P09132 144 aaKnown RBP8.38□□□□□ -1.07
GPNMB-213ENST00000492512 NTF3P20783 257 aa8.38□□□□□ -1.07
GPNMB-213ENST00000492512 RPL35P42766 123 aaKnown RBP8.38□□□□□ -1.07
GPNMB-213ENST00000492512 GAGE2BQ13066 116 aa8.38□□□□□ -1.07
GPNMB-213ENST00000492512 PRR26Q8N8Z3 221 aa8.38□□□□□ -1.07
GPNMB-213ENST00000492512 MANBALQ9NQG1 85 aa8.38□□□□□ -1.07
GPNMB-213ENST00000492512 GNG13Q9P2W3 67 aa8.38□□□□□ -1.07
GPNMB-213ENST00000492512 H7C423 109 aa8.37□□□□□ -1.07
GPNMB-213ENST00000492512 CCL25O15444 150 aa8.37□□□□□ -1.07
GPNMB-213ENST00000492512 FGF6P10767 208 aa8.37□□□□□ -1.07
GPNMB-213ENST00000492512 OR5A1Q8NGJ0 315 aa8.37□□□□□ -1.07
GPNMB-213ENST00000492512 LOC107984640A0A0U1RRK4 108 aa8.36□□□□□ -1.07
GPNMB-213ENST00000492512 A0A1W2PNN7 141 aa8.36□□□□□ -1.07
GPNMB-213ENST00000492512 XKRY2A2RUG3 117 aa8.36□□□□□ -1.07
GPNMB-213ENST00000492512 NCR2O95944 276 aa8.36□□□□□ -1.07
GPNMB-213ENST00000492512 APCSP02743 223 aa8.36□□□□□ -1.07
GPNMB-213ENST00000492512 RHEBQ15382 184 aa8.36□□□□□ -1.07
GPNMB-213ENST00000492512 C1orf137Q5JT78 98 aa8.36□□□□□ -1.07
GPNMB-213ENST00000492512 LYZL1Q6UWQ5 148 aa8.36□□□□□ -1.07
GPNMB-213ENST00000492512 LINC00959A0A1B0GUT2 108 aa8.35□□□□□ -1.07
GPNMB-213ENST00000492512 TMEM250H0YL14 139 aa8.35□□□□□ -1.07
GPNMB-213ENST00000492512 ZNF25P17030 456 aaPredicted RBP8.35□□□□□ -1.07
GPNMB-213ENST00000492512 GATD1Q8NB37 220 aa8.35□□□□□ -1.07
GPNMB-213ENST00000492512 BTF3L4Q96K17 158 aa8.35□□□□□ -1.07
GPNMB-213ENST00000492512 C19orf71A6NCJ1 209 aa8.34□□□□□ -1.07
GPNMB-213ENST00000492512 CAMPP49913 170 aa8.34□□□□□ -1.07
GPNMB-213ENST00000492512 MEF2BQ02080 365 aaPredicted RBP8.34□□□□□ -1.07
GPNMB-213ENST00000492512 PRR4Q16378 134 aa8.34□□□□□ -1.07
GPNMB-213ENST00000492512 FAM74A3Q4VXF1 159 aa8.34□□□□□ -1.07
GPNMB-213ENST00000492512 CENPWQ5EE01 88 aa8.34□□□□□ -1.07
GPNMB-213ENST00000492512 DIRC1Q969H9 104 aa8.34□□□□□ -1.07
GPNMB-213ENST00000492512 ISOC2Q96AB3 205 aa8.34□□□□□ -1.07
GPNMB-213ENST00000492512 TMEM101Q96IK0 257 aa8.34□□□□□ -1.07
GPNMB-213ENST00000492512 SMCO4Q9NRQ5 59 aa8.34□□□□□ -1.07
GPNMB-213ENST00000492512 PNRC1Q12796 327 aaPredicted RBP8.33□□□□□ -1.08
GPNMB-213ENST00000492512 SS18Q15532 418 aa8.33□□□□□ -1.08
GPNMB-213ENST00000492512 TWIST1Q15672 202 aa8.33□□□□□ -1.08
GPNMB-213ENST00000492512 C9orf116Q5BN46 136 aaPredicted RBP8.33□□□□□ -1.08
GPNMB-213ENST00000492512 RPL39LQ96EH5 51 aaKnown RBP8.33□□□□□ -1.08
GPNMB-213ENST00000492512 C7orf77A4D0Y5 90 aa8.32□□□□□ -1.08
GPNMB-213ENST00000492512 CD164L2Q6UWJ8 174 aa8.32□□□□□ -1.08
GPNMB-213ENST00000492512 PHF5AQ7RTV0 110 aaKnown RBP8.32□□□□□ -1.08
GPNMB-213ENST00000492512 TMA7Q9Y2S6 64 aaKnown RBP8.32□□□□□ -1.08
GPNMB-213ENST00000492512 IGLV4-69A0A075B6H9 119 aa8.31□□□□□ -1.08
GPNMB-213ENST00000492512 KRTAP9-6A0A140TA67 174 aa8.31□□□□□ -1.08
GPNMB-213ENST00000492512 SDHAF1A6NFY7 115 aa8.31□□□□□ -1.08
GPNMB-213ENST00000492512 PDE6DO43924 150 aa8.31□□□□□ -1.08
GPNMB-213ENST00000492512 C11orf52Q96A22 123 aa8.31□□□□□ -1.08
GPNMB-213ENST00000492512 RPS10P5Q9NQ39 176 aa8.31□□□□□ -1.08
GPNMB-213ENST00000492512 IGLV1-50A0A075B6I6 118 aa8.3□□□□□ -1.08
GPNMB-213ENST00000492512 APOMO95445 188 aa8.3□□□□□ -1.08
GPNMB-213ENST00000492512 IGLV7-43P04211 117 aa8.3□□□□□ -1.08
GPNMB-213ENST00000492512 PMCHP20382 165 aa8.3□□□□□ -1.08
GPNMB-213ENST00000492512 MALP21145 153 aa8.3□□□□□ -1.08
GPNMB-213ENST00000492512 CTRLP40313 264 aa8.3□□□□□ -1.08
GPNMB-213ENST00000492512 GNG4P50150 75 aa8.3□□□□□ -1.08
GPNMB-213ENST00000492512 CEBPGP53567 150 aa8.3□□□□□ -1.08
GPNMB-213ENST00000492512 RPL18AQ02543 176 aaKnown RBP8.3□□□□□ -1.08
GPNMB-213ENST00000492512 NUP35Q8NFH5 326 aa8.3□□□□□ -1.08
GPNMB-213ENST00000492512 CAMK2N2Q96S95 79 aa8.3□□□□□ -1.08
GPNMB-213ENST00000492512 ZNF727A8MUV8 499 aa8.29□□□□□ -1.08
GPNMB-213ENST00000492512 H0Y9J4 135 aa8.29□□□□□ -1.08
GPNMB-213ENST00000492512 CBLN2Q8IUK8 224 aa8.29□□□□□ -1.08
GPNMB-213ENST00000492512 SMIM12Q96EX1 92 aa8.29□□□□□ -1.08
GPNMB-213ENST00000492512 SMIM7Q9BQ49 75 aa8.29□□□□□ -1.08
GPNMB-213ENST00000492512 NAT8Q9UHE5 227 aa8.29□□□□□ -1.08
GPNMB-213ENST00000492512 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.28□□□□□ -1.08
GPNMB-213ENST00000492512 I3L3M4 83 aa8.28□□□□□ -1.08
GPNMB-213ENST00000492512 TMEM241Q24JQ0 296 aa8.28□□□□□ -1.08
GPNMB-213ENST00000492512 SMIM15Q7Z3B0 74 aa8.28□□□□□ -1.08
GPNMB-213ENST00000492512 MRAP2Q96G30 205 aa8.28□□□□□ -1.08
GPNMB-213ENST00000492512 CNFNQ9BYD5 112 aa8.28□□□□□ -1.08
GPNMB-213ENST00000492512 CTDSP1Q9GZU7 261 aa8.28□□□□□ -1.08
GPNMB-213ENST00000492512 FAT4Q6V0I7 4981 aa8.27□□□□□ -1.09
GPNMB-213ENST00000492512 A0A087WZ39 114 aa8.27□□□□□ -1.09
GPNMB-213ENST00000492512 COX7A2LO14548 114 aa8.27□□□□□ -1.09
GPNMB-213ENST00000492512 BIN3Q9NQY0 253 aa8.27□□□□□ -1.09
GPNMB-213ENST00000492512 CDC42SE2Q9NRR3 84 aa8.27□□□□□ -1.09
GPNMB-213ENST00000492512 TMEM242Q9NWH2 141 aa8.27□□□□□ -1.09
GPNMB-213ENST00000492512 MT-ND4LP03901 98 aa8.26□□□□□ -1.09
GPNMB-213ENST00000492512 ESDP10768 282 aa8.26□□□□□ -1.09
GPNMB-213ENST00000492512 UBE2D1P51668 147 aa8.26□□□□□ -1.09
GPNMB-213ENST00000492512 LCE2AQ5TA79 106 aaPredicted RBP8.26□□□□□ -1.09
GPNMB-213ENST00000492512 NUDT10Q8NFP7 164 aa8.26□□□□□ -1.09
GPNMB-213ENST00000492512 TSKUQ8WUA8 353 aa8.26□□□□□ -1.09
GPNMB-213ENST00000492512 NUDT11Q96G61 164 aa8.26□□□□□ -1.09
GPNMB-213ENST00000492512 C2orf48Q96LS8 159 aa8.26□□□□□ -1.09
GPNMB-213ENST00000492512 COLCA2A8K830 154 aa8.25□□□□□ -1.09
GPNMB-213ENST00000492512 FOXA3P55318 350 aaPredicted RBP8.25□□□□□ -1.09
GPNMB-213ENST00000492512 MRPL52Q86TS9 123 aaKnown RBP8.25□□□□□ -1.09
GPNMB-213ENST00000492512 OPRPNQ99935 248 aaPredicted RBP8.25□□□□□ -1.09
GPNMB-213ENST00000492512 TRBV20OR9-2A0A075B6H5 130 aa8.24□□□□□ -1.09
GPNMB-213ENST00000492512 TRBV6-5A0A0K0K1A5 114 aa8.24□□□□□ -1.09
GPNMB-213ENST00000492512 C1orf196B1AJZ1 125 aa8.24□□□□□ -1.09
GPNMB-213ENST00000492512 TSHBP01222 138 aa8.24□□□□□ -1.09
GPNMB-213ENST00000492512 KRTAP1-4P0C5Y4 121 aa8.24□□□□□ -1.09
GPNMB-213ENST00000492512 RPL13AP40429 203 aaKnown RBP8.24□□□□□ -1.09
GPNMB-213ENST00000492512 RPL23P62829 140 aaKnown RBP8.23□□□□□ -1.09
GPNMB-213ENST00000492512 ADIRFQ15847 76 aa8.23□□□□□ -1.09
GPNMB-213ENST00000492512 ANAPC16Q96DE5 110 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms