RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 PPP1R17O96001 155 aa20.09■□□□□ 0.81
LDB1-204ENST00000490751 VCYO14598 125 aa20.08■□□□□ 0.81
LDB1-204ENST00000490751 CAMPP49913 170 aa20.08■□□□□ 0.81
LDB1-204ENST00000490751 SUMO2P61956 95 aaKnown RBP20.08■□□□□ 0.81
LDB1-204ENST00000490751 HIGD2BQ4VC39 106 aa20.08■□□□□ 0.81
LDB1-204ENST00000490751 FAM104BQ5XKR9 115 aa20.08■□□□□ 0.81
LDB1-204ENST00000490751 MRPL52Q86TS9 123 aaKnown RBP20.08■□□□□ 0.81
LDB1-204ENST00000490751 FOXI1Q12951 378 aa20.07■□□□□ 0.8
LDB1-204ENST00000490751 MRPL51Q4U2R6 128 aaKnown RBP20.07■□□□□ 0.8
LDB1-204ENST00000490751 FCER1GP30273 86 aa20.06■□□□□ 0.8
LDB1-204ENST00000490751 LINC00959A0A1B0GUT2 108 aa20.05■□□□□ 0.8
LDB1-204ENST00000490751 J3QL48 77 aa20.05■□□□□ 0.8
LDB1-204ENST00000490751 XCL1P47992 114 aa20.05■□□□□ 0.8
LDB1-204ENST00000490751 CIRBPQ14011 172 aaKnown RBP20.05■□□□□ 0.8
LDB1-204ENST00000490751 CDC42SE2Q9NRR3 84 aa20.05■□□□□ 0.8
LDB1-204ENST00000490751 A0A1B0GW15 77 aa20.04■□□□□ 0.8
LDB1-204ENST00000490751 RPL37AP61513 92 aaKnown RBP20.04■□□□□ 0.8
LDB1-204ENST00000490751 PPP1R2P9O14990 202 aa20.03■□□□□ 0.8
LDB1-204ENST00000490751 CCL25O15444 150 aa20.03■□□□□ 0.8
LDB1-204ENST00000490751 GVQW2A0A096LPI5 108 aaPredicted RBP20.02■□□□□ 0.8
LDB1-204ENST00000490751 CHTF8P0CG12 524 aa20.02■□□□□ 0.8
LDB1-204ENST00000490751 ZNF664Q8N3J9 261 aa20.02■□□□□ 0.8
LDB1-204ENST00000490751 KIR2DL4Q99706 377 aa20.02■□□□□ 0.8
LDB1-204ENST00000490751 MRPL54Q6P161 138 aaKnown RBP20.01■□□□□ 0.79
LDB1-204ENST00000490751 LINC00862A6NCI5 91 aa20■□□□□ 0.79
LDB1-204ENST00000490751 KRTAP29-1A8MX34 341 aaPredicted RBP20■□□□□ 0.79
LDB1-204ENST00000490751 SS18Q15532 418 aa20■□□□□ 0.79
LDB1-204ENST00000490751 CKS2P33552 79 aa19.99■□□□□ 0.79
LDB1-204ENST00000490751 HBBP68871 147 aa19.98■□□□□ 0.79
LDB1-204ENST00000490751 DPH3Q96FX2 82 aa19.98■□□□□ 0.79
LDB1-204ENST00000490751 S100A8P05109 93 aa19.97■□□□□ 0.79
LDB1-204ENST00000490751 SPACA4Q8TDM5 124 aa19.97■□□□□ 0.79
LDB1-204ENST00000490751 C20orf78Q9BR46 151 aa19.97■□□□□ 0.79
LDB1-204ENST00000490751 UBE2D4Q9Y2X8 147 aa19.97■□□□□ 0.79
LDB1-204ENST00000490751 A0A1B0GXF2 115 aa19.96■□□□□ 0.79
LDB1-204ENST00000490751 COX6A2Q02221 97 aa19.96■□□□□ 0.79
LDB1-204ENST00000490751 TRBV24-1A0A075B6N3 115 aa19.95■□□□□ 0.78
LDB1-204ENST00000490751 A0A087WYN8 130 aa19.95■□□□□ 0.78
LDB1-204ENST00000490751 IGHV1-58A0A0C4DH39 117 aa19.95■□□□□ 0.78
LDB1-204ENST00000490751 SMAGPQ0VAQ4 97 aa19.95■□□□□ 0.78
LDB1-204ENST00000490751 CD164L2Q6UWJ8 174 aa19.95■□□□□ 0.78
LDB1-204ENST00000490751 CSDC2Q9Y534 153 aaKnown RBP19.95■□□□□ 0.78
LDB1-204ENST00000490751 F8W036 122 aa19.94■□□□□ 0.78
LDB1-204ENST00000490751 TNFRSF6BO95407 300 aa19.94■□□□□ 0.78
LDB1-204ENST00000490751 PKHD1L1Q86WI1 4243 aa19.94■□□□□ 0.78
LDB1-204ENST00000490751 D6R8Y8 96 aa19.93■□□□□ 0.78
LDB1-204ENST00000490751 RPL32P62910 135 aaKnown RBP19.93■□□□□ 0.78
LDB1-204ENST00000490751 PRSS3P2Q8NHM4 247 aa19.93■□□□□ 0.78
LDB1-204ENST00000490751 RNASE13Q5GAN3 156 aaKnown RBP19.92■□□□□ 0.78
LDB1-204ENST00000490751 LRP1Q07954 4544 aaKnown RBP19.92■□□□□ 0.78
LDB1-204ENST00000490751 TMEM18Q96B42 140 aa19.91■□□□□ 0.78
LDB1-204ENST00000490751 LINC00526Q96FQ7 95 aa19.91■□□□□ 0.78
LDB1-204ENST00000490751 SMIM2Q9BVW6 85 aa19.9■□□□□ 0.78
LDB1-204ENST00000490751 C1orf196B1AJZ1 125 aa19.89■□□□□ 0.77
LDB1-204ENST00000490751 NPYP01303 97 aa19.89■□□□□ 0.77
LDB1-204ENST00000490751 HNRNPA3P51991 378 aaKnown RBP19.89■□□□□ 0.77
LDB1-204ENST00000490751 RAB14P61106 215 aa19.89■□□□□ 0.77
LDB1-204ENST00000490751 Q6ZUT4 128 aa19.89■□□□□ 0.77
LDB1-204ENST00000490751 TIMM21Q9BVV7 248 aa19.89■□□□□ 0.77
LDB1-204ENST00000490751 FAT3Q8TDW7 4589 aa19.88■□□□□ 0.77
LDB1-204ENST00000490751 IGKV2-24A0A0C4DH68 120 aa19.88■□□□□ 0.77
LDB1-204ENST00000490751 TCAPO15273 167 aa19.88■□□□□ 0.77
LDB1-204ENST00000490751 PLAC8Q9NZF1 115 aa19.88■□□□□ 0.77
LDB1-204ENST00000490751 ATP5L2Q7Z4Y8 100 aa19.87■□□□□ 0.77
LDB1-204ENST00000490751 TRAV13-1A0A0B4J241 112 aa19.86■□□□□ 0.77
LDB1-204ENST00000490751 PPBPP02775 128 aa19.86■□□□□ 0.77
LDB1-204ENST00000490751 MAJINQ3KP22 176 aa19.86■□□□□ 0.77
LDB1-204ENST00000490751 ZNF561-AS1K7EIQ3 104 aa19.85■□□□□ 0.77
LDB1-204ENST00000490751 RPL39P62891 51 aaKnown RBP19.85■□□□□ 0.77
LDB1-204ENST00000490751 CARD19Q96LW7 228 aa19.85■□□□□ 0.77
LDB1-204ENST00000490751 COX7A2LO14548 114 aa19.84■□□□□ 0.77
LDB1-204ENST00000490751 PHOX2AO14813 284 aa19.84■□□□□ 0.77
LDB1-204ENST00000490751 OXTP01178 125 aa19.84■□□□□ 0.77
LDB1-204ENST00000490751 PNRC1Q12796 327 aaPredicted RBP19.84■□□□□ 0.77
LDB1-204ENST00000490751 A0A096LNI7 61 aa19.83■□□□□ 0.77
LDB1-204ENST00000490751 MALP21145 153 aa19.83■□□□□ 0.77
LDB1-204ENST00000490751 ORMDL3Q8N138 153 aa19.82■□□□□ 0.76
LDB1-204ENST00000490751 SYCNQ0VAF6 134 aa19.81■□□□□ 0.76
LDB1-204ENST00000490751 TMEM136Q6ZRR5 245 aa19.81■□□□□ 0.76
LDB1-204ENST00000490751 PKIGQ9Y2B9 76 aa19.8■□□□□ 0.76
LDB1-204ENST00000490751 MT-ND4LP03901 98 aa19.79■□□□□ 0.76
LDB1-204ENST00000490751 STPG4Q8N801 248 aa19.79■□□□□ 0.76
LDB1-204ENST00000490751 ANAPC16Q96DE5 110 aa19.79■□□□□ 0.76
LDB1-204ENST00000490751 PRELID3AQ96N28 172 aa19.79■□□□□ 0.76
LDB1-204ENST00000490751 SPANXA1Q9NS26 97 aa19.79■□□□□ 0.76
LDB1-204ENST00000490751 C5orf38Q86SI9 138 aa19.78■□□□□ 0.76
LDB1-204ENST00000490751 IGLV4-69A0A075B6H9 119 aa19.77■□□□□ 0.76
LDB1-204ENST00000490751 C7orf33Q8WU49 177 aa19.77■□□□□ 0.76
LDB1-204ENST00000490751 FAM104AQ969W3 186 aa19.77■□□□□ 0.76
LDB1-204ENST00000490751 OPRPNQ99935 248 aaPredicted RBP19.76■□□□□ 0.75
LDB1-204ENST00000490751 CLLU1Q5K131 121 aa19.75■□□□□ 0.75
LDB1-204ENST00000490751 LINC00474Q9P2X8 69 aa19.75■□□□□ 0.75
LDB1-204ENST00000490751 MRPS36P82909 103 aaKnown RBP19.74■□□□□ 0.75
LDB1-204ENST00000490751 RAB5AP20339 215 aa19.73■□□□□ 0.75
LDB1-204ENST00000490751 Q6ZRU5 148 aa19.73■□□□□ 0.75
LDB1-204ENST00000490751 APOMO95445 188 aa19.72■□□□□ 0.75
LDB1-204ENST00000490751 CAMK2N2Q96S95 79 aa19.71■□□□□ 0.75
LDB1-204ENST00000490751 LAMTOR2Q9Y2Q5 125 aa19.7■□□□□ 0.74
LDB1-204ENST00000490751 IFITM10A6NMD0 228 aa19.69■□□□□ 0.74
LDB1-204ENST00000490751 LOC389332A0A1B0GUA5 103 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms