RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 MRPL52Q86TS9 123 aaKnown RBP10.06□□□□□ -0.8
VPS26A-207ENST00000490696 BTF3L4Q96K17 158 aa10.06□□□□□ -0.8
VPS26A-207ENST00000490696 KIR2DL4Q99706 377 aa10.06□□□□□ -0.8
VPS26A-207ENST00000490696 CTDSP1Q9GZU7 261 aa10.06□□□□□ -0.8
VPS26A-207ENST00000490696 C10orf91Q5T1B1 145 aa10.05□□□□□ -0.8
VPS26A-207ENST00000490696 ORMDL3Q8N138 153 aa10.05□□□□□ -0.8
VPS26A-207ENST00000490696 SMIM2Q9BVW6 85 aa10.05□□□□□ -0.8
VPS26A-207ENST00000490696 KRTAP4-5Q9BYR2 181 aa10.05□□□□□ -0.8
VPS26A-207ENST00000490696 IGKV3OR2-268A0A0C4DH90 116 aa10.04□□□□□ -0.8
VPS26A-207ENST00000490696 TMEM136Q6ZRR5 245 aa10.04□□□□□ -0.8
VPS26A-207ENST00000490696 OR5A1Q8NGJ0 315 aa10.04□□□□□ -0.8
VPS26A-207ENST00000490696 TMEM101Q96IK0 257 aa10.04□□□□□ -0.8
VPS26A-207ENST00000490696 PRSS1P07477 247 aa10.03□□□□□ -0.8
VPS26A-207ENST00000490696 PRELID3AQ96N28 172 aa10.03□□□□□ -0.8
VPS26A-207ENST00000490696 CDC42SE2Q9NRR3 84 aa10.03□□□□□ -0.8
VPS26A-207ENST00000490696 FAM30AQ9NZY2 134 aa10.03□□□□□ -0.8
VPS26A-207ENST00000490696 CARHSP1Q9Y2V2 147 aaKnown RBP10.03□□□□□ -0.8
VPS26A-207ENST00000490696 TCAPO15273 167 aa10.02□□□□□ -0.81
VPS26A-207ENST00000490696 LINC01620Q4KN68 170 aa10.02□□□□□ -0.81
VPS26A-207ENST00000490696 CSDC2Q9Y534 153 aaKnown RBP10.02□□□□□ -0.81
VPS26A-207ENST00000490696 GAGE12HA6NDE8 117 aa10.01□□□□□ -0.81
VPS26A-207ENST00000490696 Q8N1X5 172 aa10.01□□□□□ -0.81
VPS26A-207ENST00000490696 ZNF664Q8N3J9 261 aa10.01□□□□□ -0.81
VPS26A-207ENST00000490696 CHCHD10Q8WYQ3 142 aaPredicted RBP10.01□□□□□ -0.81
VPS26A-207ENST00000490696 UBE2D4Q9Y2X8 147 aa10.01□□□□□ -0.81
VPS26A-207ENST00000490696 HERC1Q15751 4861 aa10□□□□□ -0.81
VPS26A-207ENST00000490696 TRAV9-1A0A075B6T8 112 aa10□□□□□ -0.81
VPS26A-207ENST00000490696 LINC00959A0A1B0GUT2 108 aa10□□□□□ -0.81
VPS26A-207ENST00000490696 PRSS47A8MTI9 375 aa10□□□□□ -0.81
VPS26A-207ENST00000490696 Q6ZSA8 131 aa10□□□□□ -0.81
VPS26A-207ENST00000490696 CLRN3Q8NCR9 226 aa10□□□□□ -0.81
VPS26A-207ENST00000490696 LAMTOR2Q9Y2Q5 125 aa10□□□□□ -0.81
VPS26A-207ENST00000490696 SMAGPQ0VAQ4 97 aa9.99□□□□□ -0.81
VPS26A-207ENST00000490696 DGAT2L7PQ6IED9 249 aa9.99□□□□□ -0.81
VPS26A-207ENST00000490696 TMEM18Q96B42 140 aa9.99□□□□□ -0.81
VPS26A-207ENST00000490696 TIMM21Q9BVV7 248 aa9.99□□□□□ -0.81
VPS26A-207ENST00000490696 DNAH8Q96JB1 4490 aa9.99□□□□□ -0.81
VPS26A-207ENST00000490696 RPL39P62891 51 aaKnown RBP9.98□□□□□ -0.81
VPS26A-207ENST00000490696 HAMPP81172 84 aa9.98□□□□□ -0.81
VPS26A-207ENST00000490696 FOXI1Q12951 378 aa9.98□□□□□ -0.81
VPS26A-207ENST00000490696 RHEBQ15382 184 aa9.98□□□□□ -0.81
VPS26A-207ENST00000490696 hDV102S1A0JD36 115 aa9.97□□□□□ -0.81
VPS26A-207ENST00000490696 C15orf56Q8N910 161 aa9.97□□□□□ -0.81
VPS26A-207ENST00000490696 MAP1LC3AQ9H492 121 aa9.97□□□□□ -0.81
VPS26A-207ENST00000490696 CCL25O15444 150 aa9.96□□□□□ -0.82
VPS26A-207ENST00000490696 S100PP25815 95 aa9.96□□□□□ -0.82
VPS26A-207ENST00000490696 XCL1P47992 114 aa9.96□□□□□ -0.82
VPS26A-207ENST00000490696 RNASE13Q5GAN3 156 aaKnown RBP9.96□□□□□ -0.82
VPS26A-207ENST00000490696 Q6ZUT4 128 aa9.96□□□□□ -0.82
VPS26A-207ENST00000490696 FAM104AQ969W3 186 aa9.96□□□□□ -0.82
VPS26A-207ENST00000490696 RPS10P5Q9NQ39 176 aa9.96□□□□□ -0.82
VPS26A-207ENST00000490696 FAT1Q14517 4588 aa9.95□□□□□ -0.82
VPS26A-207ENST00000490696 LOC389332A0A1B0GUA5 103 aa9.95□□□□□ -0.82
VPS26A-207ENST00000490696 SLPIP03973 132 aa9.95□□□□□ -0.82
VPS26A-207ENST00000490696 RAB5AP20339 215 aa9.95□□□□□ -0.82
VPS26A-207ENST00000490696 CNBPP62633 177 aaKnown RBP9.95□□□□□ -0.82
VPS26A-207ENST00000490696 SS18Q15532 418 aa9.95□□□□□ -0.82
VPS26A-207ENST00000490696 CFAP161Q6P656 301 aa9.95□□□□□ -0.82
VPS26A-207ENST00000490696 C9orf163Q8N9P6 203 aa9.95□□□□□ -0.82
VPS26A-207ENST00000490696 SPANXA1Q9NS26 97 aa9.95□□□□□ -0.82
VPS26A-207ENST00000490696 CD164L2Q6UWJ8 174 aa9.94□□□□□ -0.82
VPS26A-207ENST00000490696 Q8N8P6 123 aa9.94□□□□□ -0.82
VPS26A-207ENST00000490696 C1orf196B1AJZ1 125 aa9.93□□□□□ -0.82
VPS26A-207ENST00000490696 MRPS36P82909 103 aaKnown RBP9.93□□□□□ -0.82
VPS26A-207ENST00000490696 KIAA1644Q3SXP7 199 aa9.93□□□□□ -0.82
VPS26A-207ENST00000490696 GNB1LQ9BYB4 327 aa9.93□□□□□ -0.82
VPS26A-207ENST00000490696 AP5S1Q9NUS5 200 aa9.93□□□□□ -0.82
VPS26A-207ENST00000490696 GVQW2A0A096LPI5 108 aaPredicted RBP9.92□□□□□ -0.82
VPS26A-207ENST00000490696 TRAV13-1A0A0B4J241 112 aa9.92□□□□□ -0.82
VPS26A-207ENST00000490696 APOC3P02656 99 aa9.92□□□□□ -0.82
VPS26A-207ENST00000490696 SMR3BP02814 79 aaPredicted RBP9.92□□□□□ -0.82
VPS26A-207ENST00000490696 HIGD2BQ4VC39 106 aa9.92□□□□□ -0.82
VPS26A-207ENST00000490696 OPRPNQ99935 248 aaPredicted RBP9.92□□□□□ -0.82
VPS26A-207ENST00000490696 EPM2AB3EWF7 344 aa9.91□□□□□ -0.82
VPS26A-207ENST00000490696 COX19Q49B96 90 aa9.91□□□□□ -0.82
VPS26A-207ENST00000490696 SCXQ7RTU7 201 aa9.91□□□□□ -0.82
VPS26A-207ENST00000490696 CHAC1Q9BUX1 264 aa9.91□□□□□ -0.82
VPS26A-207ENST00000490696 PYGO1Q9Y3Y4 419 aa9.91□□□□□ -0.82
VPS26A-207ENST00000490696 K7EMI3 77 aa9.9□□□□□ -0.82
VPS26A-207ENST00000490696 IFI27P40305 119 aaPredicted RBP9.9□□□□□ -0.82
VPS26A-207ENST00000490696 NDUFA5Q16718 116 aa9.9□□□□□ -0.82
VPS26A-207ENST00000490696 SDIM1Q6ZPB5 146 aa9.9□□□□□ -0.82
VPS26A-207ENST00000490696 SVBPQ8N300 66 aa9.9□□□□□ -0.82
VPS26A-207ENST00000490696 NXT2Q9NPJ8 142 aaKnown RBP9.9□□□□□ -0.82
VPS26A-207ENST00000490696 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.89□□□□□ -0.83
VPS26A-207ENST00000490696 IGHV1-58A0A0C4DH39 117 aa9.89□□□□□ -0.83
VPS26A-207ENST00000490696 SNAPINO95295 136 aa9.89□□□□□ -0.83
VPS26A-207ENST00000490696 LORP23490 312 aaPredicted RBP9.89□□□□□ -0.83
VPS26A-207ENST00000490696 ORMDL2Q53FV1 153 aa9.89□□□□□ -0.83
VPS26A-207ENST00000490696 Q5VSD8 79 aa9.89□□□□□ -0.83
VPS26A-207ENST00000490696 IGLV4-3A0A075B6K6 122 aa9.88□□□□□ -0.83
VPS26A-207ENST00000490696 MT-ND6P03923 174 aa9.88□□□□□ -0.83
VPS26A-207ENST00000490696 C2orf66Q6UXQ4 117 aa9.88□□□□□ -0.83
VPS26A-207ENST00000490696 CIRBP-AS1Q8TBR5 109 aa9.88□□□□□ -0.83
VPS26A-207ENST00000490696 ALKBH7Q9BT30 221 aaPredicted RBP9.88□□□□□ -0.83
VPS26A-207ENST00000490696 CYSLTR1Q9Y271 337 aa9.88□□□□□ -0.83
VPS26A-207ENST00000490696 DMBT1Q9UGM3 2413 aaPredicted RBP9.88□□□□□ -0.83
VPS26A-207ENST00000490696 TGIF2-C20orf24A0A0A6YYL0 155 aa9.87□□□□□ -0.83
VPS26A-207ENST00000490696 COX7A2LO14548 114 aa9.87□□□□□ -0.83
VPS26A-207ENST00000490696 MRPL18Q9H0U6 180 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms