RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 SPCS1Q9Y6A9 102 aa3.39□□□□□ -1.87
CSTF1-205ENST00000490539 IGHV4-4A0A075B6R2 117 aa3.38□□□□□ -1.87
CSTF1-205ENST00000490539 LCE6AA0A183 80 aa3.38□□□□□ -1.87
CSTF1-205ENST00000490539 TEX48A0A1B0GUV7 120 aa3.38□□□□□ -1.87
CSTF1-205ENST00000490539 KNCNA6PVL3 124 aa3.38□□□□□ -1.87
CSTF1-205ENST00000490539 MIFP14174 115 aa3.38□□□□□ -1.87
CSTF1-205ENST00000490539 HLA-DMBP28068 263 aa3.38□□□□□ -1.87
CSTF1-205ENST00000490539 FXYD2P54710 66 aa3.38□□□□□ -1.87
CSTF1-205ENST00000490539 FXYD7P58549 80 aa3.38□□□□□ -1.87
CSTF1-205ENST00000490539 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.38□□□□□ -1.87
CSTF1-205ENST00000490539 TRPT1Q86TN4 253 aaKnown RBP3.38□□□□□ -1.87
CSTF1-205ENST00000490539 CEND1Q8N111 149 aa3.38□□□□□ -1.87
CSTF1-205ENST00000490539 Q8TAT8 98 aa3.38□□□□□ -1.87
CSTF1-205ENST00000490539 PHLDA1Q8WV24 401 aaPredicted RBP3.38□□□□□ -1.87
CSTF1-205ENST00000490539 RAB37Q96AX2 223 aa3.38□□□□□ -1.87
CSTF1-205ENST00000490539 OVOL2Q9BRP0 275 aa3.38□□□□□ -1.87
CSTF1-205ENST00000490539 KLK5Q9Y337 293 aaPredicted RBP3.38□□□□□ -1.87
CSTF1-205ENST00000490539 MUC2Q02817 5179 aa3.37□□□□□ -1.87
CSTF1-205ENST00000490539 TRBV25-1A0A075B6N4 114 aa3.37□□□□□ -1.87
CSTF1-205ENST00000490539 IGHV3OR16-12A0A075B7B8 117 aa3.37□□□□□ -1.87
CSTF1-205ENST00000490539 A0A087WX48 190 aa3.37□□□□□ -1.87
CSTF1-205ENST00000490539 IGKV2D-26A0A0A0MRZ7 120 aa3.37□□□□□ -1.87
CSTF1-205ENST00000490539 TRAV12-1A0A0B4J245 112 aa3.37□□□□□ -1.87
CSTF1-205ENST00000490539 IGKV3D-20A0A0C4DH25 116 aa3.37□□□□□ -1.87
CSTF1-205ENST00000490539 NUPR2A6NF83 97 aa3.37□□□□□ -1.87
CSTF1-205ENST00000490539 SMIM9A6NGZ8 99 aa3.37□□□□□ -1.87
CSTF1-205ENST00000490539 E9PLD3 99 aa3.37□□□□□ -1.87
CSTF1-205ENST00000490539 H3BMM0 161 aa3.37□□□□□ -1.87
CSTF1-205ENST00000490539 K7EMI3 77 aa3.37□□□□□ -1.87
CSTF1-205ENST00000490539 INSP01308 110 aa3.37□□□□□ -1.87
CSTF1-205ENST00000490539 PRB4P10163 310 aaPredicted RBP3.37□□□□□ -1.87
CSTF1-205ENST00000490539 SCGB1A1P11684 91 aa3.37□□□□□ -1.87
CSTF1-205ENST00000490539 PLNP26678 52 aa3.37□□□□□ -1.87
CSTF1-205ENST00000490539 ERCC8Q13216 396 aa3.37□□□□□ -1.87
CSTF1-205ENST00000490539 LAGE3Q14657 143 aa3.37□□□□□ -1.87
CSTF1-205ENST00000490539 TMEM78Q5T7P6 136 aa3.37□□□□□ -1.87
CSTF1-205ENST00000490539 ZC2HC1BQ5TFG8 222 aa3.37□□□□□ -1.87
CSTF1-205ENST00000490539 C11orf45Q8TAV5 145 aa3.37□□□□□ -1.87
CSTF1-205ENST00000490539 MRAP2Q96G30 205 aa3.37□□□□□ -1.87
CSTF1-205ENST00000490539 C18orf15Q96N68 181 aa3.37□□□□□ -1.87
CSTF1-205ENST00000490539 NAA38Q9BRA0 125 aaKnown RBP3.37□□□□□ -1.87
CSTF1-205ENST00000490539 XCL2Q9UBD3 114 aa3.37□□□□□ -1.87
CSTF1-205ENST00000490539 LENEPQ9Y5L5 61 aa3.37□□□□□ -1.87
CSTF1-205ENST00000490539 DNAH3Q8TD57 4116 aa3.37□□□□□ -1.87
CSTF1-205ENST00000490539 AGRNO00468 2067 aa3.37□□□□□ -1.87
CSTF1-205ENST00000490539 A0A0J9YWU9 116 aa3.36□□□□□ -1.87
CSTF1-205ENST00000490539 A0A0J9YX75 114 aa3.36□□□□□ -1.87
CSTF1-205ENST00000490539 A0A1B0GWB2 263 aa3.36□□□□□ -1.87
CSTF1-205ENST00000490539 IGLL5B9A064 214 aa3.36□□□□□ -1.87
CSTF1-205ENST00000490539 TMEM238C9JI98 176 aa3.36□□□□□ -1.87
CSTF1-205ENST00000490539 F8W1H4 67 aa3.36□□□□□ -1.87
CSTF1-205ENST00000490539 GATA1P15976 413 aaPredicted RBP3.36□□□□□ -1.87
CSTF1-205ENST00000490539 TCTAP57738 103 aa3.36□□□□□ -1.87
CSTF1-205ENST00000490539 RPL24P83731 157 aaKnown RBP3.36□□□□□ -1.87
CSTF1-205ENST00000490539 RRN3P1Q2M238 152 aa3.36□□□□□ -1.87
CSTF1-205ENST00000490539 RNF182Q8N6D2 247 aa3.36□□□□□ -1.87
CSTF1-205ENST00000490539 AGPAT4-IT1Q9H0P7 198 aa3.36□□□□□ -1.87
CSTF1-205ENST00000490539 C11orf68Q9H3H3 251 aaKnown RBP3.36□□□□□ -1.87
CSTF1-205ENST00000490539 RETNQ9HD89 108 aa3.36□□□□□ -1.87
CSTF1-205ENST00000490539 NHP2Q9NX24 153 aaKnown RBP3.36□□□□□ -1.87
CSTF1-205ENST00000490539 MRPL35Q9NZE8 188 aaKnown RBP3.36□□□□□ -1.87
CSTF1-205ENST00000490539 DNAH7Q8WXX0 4024 aa3.35□□□□□ -1.87
CSTF1-205ENST00000490539 DNAH10Q8IVF4 4471 aa3.35□□□□□ -1.87
CSTF1-205ENST00000490539 TRBV7-3A0A075B6L6 115 aa3.35□□□□□ -1.87
CSTF1-205ENST00000490539 TRAV8-2A0A0B4J237 113 aa3.35□□□□□ -1.87
CSTF1-205ENST00000490539 F8VRH5 84 aa3.35□□□□□ -1.87
CSTF1-205ENST00000490539 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.35□□□□□ -1.87
CSTF1-205ENST00000490539 H7C1H1 209 aa3.35□□□□□ -1.87
CSTF1-205ENST00000490539 J3QR89 54 aa3.35□□□□□ -1.87
CSTF1-205ENST00000490539 M0R381 172 aa3.35□□□□□ -1.87
CSTF1-205ENST00000490539 SOCS3O14543 225 aa3.35□□□□□ -1.87
CSTF1-205ENST00000490539 SPART-AS1P0CW21 52 aa3.35□□□□□ -1.87
CSTF1-205ENST00000490539 HTN1P15515 57 aa3.35□□□□□ -1.87
CSTF1-205ENST00000490539 LINC01547P58512 204 aaPredicted RBP3.35□□□□□ -1.87
CSTF1-205ENST00000490539 C12orf74Q32Q52 190 aa3.35□□□□□ -1.87
CSTF1-205ENST00000490539 ZNF876PQ49A33 203 aa3.35□□□□□ -1.87
CSTF1-205ENST00000490539 ORMDL2Q53FV1 153 aa3.35□□□□□ -1.87
CSTF1-205ENST00000490539 SPANXN1Q5VSR9 72 aa3.35□□□□□ -1.87
CSTF1-205ENST00000490539 MAPKAPK5-AS1Q8N8E1 139 aa3.35□□□□□ -1.87
CSTF1-205ENST00000490539 TOMM6Q96B49 74 aa3.35□□□□□ -1.87
CSTF1-205ENST00000490539 LINC00477Q96M19 166 aa3.35□□□□□ -1.87
CSTF1-205ENST00000490539 LINC01587Q99440 93 aa3.35□□□□□ -1.87
CSTF1-205ENST00000490539 C20orf78Q9BR46 151 aa3.35□□□□□ -1.87
CSTF1-205ENST00000490539 SMIM2Q9BVW6 85 aa3.35□□□□□ -1.87
CSTF1-205ENST00000490539 TTTY13Q9BZ97 58 aa3.35□□□□□ -1.87
CSTF1-205ENST00000490539 SPANXB1Q9NS25 103 aaPredicted RBP3.35□□□□□ -1.87
CSTF1-205ENST00000490539 PLECQ15149 4684 aaKnown RBP3.35□□□□□ -1.87
CSTF1-205ENST00000490539 MUC4Q99102 2169 aa3.34□□□□□ -1.87
CSTF1-205ENST00000490539 MYMXA0A1B0GTQ4 84 aa3.34□□□□□ -1.87
CSTF1-205ENST00000490539 LINC01549A6NIU2 74 aa3.34□□□□□ -1.87
CSTF1-205ENST00000490539 SMIM1B2RUZ4 78 aa3.34□□□□□ -1.87
CSTF1-205ENST00000490539 F6UB75 175 aa3.34□□□□□ -1.87
CSTF1-205ENST00000490539 K7ERJ3 54 aa3.34□□□□□ -1.87
CSTF1-205ENST00000490539 PPP1R17O96001 155 aa3.34□□□□□ -1.87
CSTF1-205ENST00000490539 EMP1P54849 157 aa3.34□□□□□ -1.87
CSTF1-205ENST00000490539 RPL32P62910 135 aaKnown RBP3.34□□□□□ -1.87
CSTF1-205ENST00000490539 SPINK13Q1W4C9 94 aa3.34□□□□□ -1.87
CSTF1-205ENST00000490539 CASC10Q5T4H9 136 aa3.34□□□□□ -1.87
CSTF1-205ENST00000490539 ZFAND6Q6FIF0 208 aa3.34□□□□□ -1.87
CSTF1-205ENST00000490539 ODF3Q96PU9 254 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms