RNA–Protein interactions for RNA: ENST00000489503.5

SMARCD3-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-213ENST00000489503 PPBPP02775 128 aa8.02□□□□□ -1.13
SMARCD3-213ENST00000489503 ZNF25P17030 456 aaPredicted RBP8.02□□□□□ -1.13
SMARCD3-213ENST00000489503 RPL39P62891 51 aaKnown RBP8.02□□□□□ -1.13
SMARCD3-213ENST00000489503 RPL32P62910 135 aaKnown RBP8.02□□□□□ -1.13
SMARCD3-213ENST00000489503 TMEM101Q96IK0 257 aa8.02□□□□□ -1.13
SMARCD3-213ENST00000489503 IMMP2LQ96T52 175 aa8.02□□□□□ -1.13
SMARCD3-213ENST00000489503 RPS10P5Q9NQ39 176 aa8.02□□□□□ -1.13
SMARCD3-213ENST00000489503 TRAV8-4A0A0B4J246 113 aa8.01□□□□□ -1.13
SMARCD3-213ENST00000489503 PHOX2AO14813 284 aa8.01□□□□□ -1.13
SMARCD3-213ENST00000489503 PRSS1P07477 247 aa8.01□□□□□ -1.13
SMARCD3-213ENST00000489503 KIAA1644Q3SXP7 199 aa8.01□□□□□ -1.13
SMARCD3-213ENST00000489503 Q6ZUT4 128 aa8.01□□□□□ -1.13
SMARCD3-213ENST00000489503 MRPL52Q86TS9 123 aaKnown RBP8.01□□□□□ -1.13
SMARCD3-213ENST00000489503 CHCHD10Q8WYQ3 142 aaPredicted RBP8.01□□□□□ -1.13
SMARCD3-213ENST00000489503 APOC3P02656 99 aa8□□□□□ -1.13
SMARCD3-213ENST00000489503 XGP55808 180 aa8□□□□□ -1.13
SMARCD3-213ENST00000489503 RHEBQ15382 184 aa8□□□□□ -1.13
SMARCD3-213ENST00000489503 KRTAP4-5Q9BYR2 181 aa8□□□□□ -1.13
SMARCD3-213ENST00000489503 CDC42SE2Q9NRR3 84 aa8□□□□□ -1.13
SMARCD3-213ENST00000489503 FAM30AQ9NZY2 134 aa8□□□□□ -1.13
SMARCD3-213ENST00000489503 UBE2D4Q9Y2X8 147 aa8□□□□□ -1.13
SMARCD3-213ENST00000489503 S100PP25815 95 aa7.99□□□□□ -1.13
SMARCD3-213ENST00000489503 XCL1P47992 114 aa7.99□□□□□ -1.13
SMARCD3-213ENST00000489503 C14orf177Q52M58 125 aa7.99□□□□□ -1.13
SMARCD3-213ENST00000489503 DGAT2L7PQ6IED9 249 aa7.99□□□□□ -1.13
SMARCD3-213ENST00000489503 ZNF664Q8N3J9 261 aa7.99□□□□□ -1.13
SMARCD3-213ENST00000489503 MAP1LC3AQ9H492 121 aa7.99□□□□□ -1.13
SMARCD3-213ENST00000489503 TRAV9-1A0A075B6T8 112 aa7.98□□□□□ -1.13
SMARCD3-213ENST00000489503 LINC00959A0A1B0GUT2 108 aa7.98□□□□□ -1.13
SMARCD3-213ENST00000489503 CCL25O15444 150 aa7.98□□□□□ -1.13
SMARCD3-213ENST00000489503 C15orf56Q8N910 161 aa7.98□□□□□ -1.13
SMARCD3-213ENST00000489503 OPRPNQ99935 248 aaPredicted RBP7.98□□□□□ -1.13
SMARCD3-213ENST00000489503 FAT1Q14517 4588 aa7.98□□□□□ -1.13
SMARCD3-213ENST00000489503 hDV102S1A0JD36 115 aa7.97□□□□□ -1.13
SMARCD3-213ENST00000489503 FOXI1Q12951 378 aa7.97□□□□□ -1.13
SMARCD3-213ENST00000489503 HIGD2BQ4VC39 106 aa7.97□□□□□ -1.13
SMARCD3-213ENST00000489503 LAMTOR2Q9Y2Q5 125 aa7.97□□□□□ -1.13
SMARCD3-213ENST00000489503 ABCA13Q86UQ4 5058 aa7.96□□□□□ -1.13
SMARCD3-213ENST00000489503 TGIF2-C20orf24A0A0A6YYL0 155 aa7.96□□□□□ -1.14
SMARCD3-213ENST00000489503 Q8N8P6 123 aa7.96□□□□□ -1.14
SMARCD3-213ENST00000489503 FAM104AQ969W3 186 aa7.96□□□□□ -1.14
SMARCD3-213ENST00000489503 TMEM18Q96B42 140 aa7.96□□□□□ -1.14
SMARCD3-213ENST00000489503 TRAV13-1A0A0B4J241 112 aa7.95□□□□□ -1.14
SMARCD3-213ENST00000489503 RAB5AP20339 215 aa7.95□□□□□ -1.14
SMARCD3-213ENST00000489503 NDUFA5Q16718 116 aa7.95□□□□□ -1.14
SMARCD3-213ENST00000489503 SLC7A5P1Q8MH63 180 aa7.95□□□□□ -1.14
SMARCD3-213ENST00000489503 TIMM21Q9BVV7 248 aa7.95□□□□□ -1.14
SMARCD3-213ENST00000489503 CSDC2Q9Y534 153 aaKnown RBP7.95□□□□□ -1.14
SMARCD3-213ENST00000489503 PRSS47A8MTI9 375 aa7.94□□□□□ -1.14
SMARCD3-213ENST00000489503 SNAPINO95295 136 aa7.94□□□□□ -1.14
SMARCD3-213ENST00000489503 SMR3BP02814 79 aaPredicted RBP7.94□□□□□ -1.14
SMARCD3-213ENST00000489503 SLPIP03973 132 aa7.94□□□□□ -1.14
SMARCD3-213ENST00000489503 IFI27P40305 119 aaPredicted RBP7.94□□□□□ -1.14
SMARCD3-213ENST00000489503 SMAGPQ0VAQ4 97 aa7.94□□□□□ -1.14
SMARCD3-213ENST00000489503 SS18Q15532 418 aa7.94□□□□□ -1.14
SMARCD3-213ENST00000489503 Q6ZSA8 131 aa7.94□□□□□ -1.14
SMARCD3-213ENST00000489503 Q8N1X5 172 aa7.94□□□□□ -1.14
SMARCD3-213ENST00000489503 SVBPQ8N300 66 aa7.94□□□□□ -1.14
SMARCD3-213ENST00000489503 GNB1LQ9BYB4 327 aa7.94□□□□□ -1.14
SMARCD3-213ENST00000489503 MRPL18Q9H0U6 180 aaKnown RBP7.94□□□□□ -1.14
SMARCD3-213ENST00000489503 SPANXA1Q9NS26 97 aa7.94□□□□□ -1.14
SMARCD3-213ENST00000489503 LINC00526Q96FQ7 95 aa7.93□□□□□ -1.14
SMARCD3-213ENST00000489503 FABP9Q0Z7S8 132 aa7.92□□□□□ -1.14
SMARCD3-213ENST00000489503 ZC2HC1BQ5TFG8 222 aa7.92□□□□□ -1.14
SMARCD3-213ENST00000489503 CD164L2Q6UWJ8 174 aa7.92□□□□□ -1.14
SMARCD3-213ENST00000489503 C2orf66Q6UXQ4 117 aa7.92□□□□□ -1.14
SMARCD3-213ENST00000489503 ALKBH7Q9BT30 221 aaPredicted RBP7.92□□□□□ -1.14
SMARCD3-213ENST00000489503 IGLV4-3A0A075B6K6 122 aa7.91□□□□□ -1.14
SMARCD3-213ENST00000489503 GVQW2A0A096LPI5 108 aaPredicted RBP7.91□□□□□ -1.14
SMARCD3-213ENST00000489503 IFITM10A6NMD0 228 aa7.91□□□□□ -1.14
SMARCD3-213ENST00000489503 CNBPP62633 177 aaKnown RBP7.91□□□□□ -1.14
SMARCD3-213ENST00000489503 MRPS36P82909 103 aaKnown RBP7.91□□□□□ -1.14
SMARCD3-213ENST00000489503 SCXQ7RTU7 201 aa7.91□□□□□ -1.14
SMARCD3-213ENST00000489503 C9orf163Q8N9P6 203 aa7.91□□□□□ -1.14
SMARCD3-213ENST00000489503 NXT2Q9NPJ8 142 aaKnown RBP7.91□□□□□ -1.14
SMARCD3-213ENST00000489503 AP5S1Q9NUS5 200 aa7.91□□□□□ -1.14
SMARCD3-213ENST00000489503 CYSLTR1Q9Y271 337 aa7.91□□□□□ -1.14
SMARCD3-213ENST00000489503 C1orf196B1AJZ1 125 aa7.9□□□□□ -1.14
SMARCD3-213ENST00000489503 PANO1I0J062 215 aa7.9□□□□□ -1.14
SMARCD3-213ENST00000489503 MT-ND6P03923 174 aa7.9□□□□□ -1.14
SMARCD3-213ENST00000489503 COX19Q49B96 90 aa7.9□□□□□ -1.14
SMARCD3-213ENST00000489503 ORMDL2Q53FV1 153 aa7.9□□□□□ -1.14
SMARCD3-213ENST00000489503 CFAP161Q6P656 301 aa7.9□□□□□ -1.14
SMARCD3-213ENST00000489503 C5orf38Q86SI9 138 aa7.9□□□□□ -1.14
SMARCD3-213ENST00000489503 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.9□□□□□ -1.14
SMARCD3-213ENST00000489503 PCLOQ9Y6V0 5065 aa7.9□□□□□ -1.14
SMARCD3-213ENST00000489503 IGHV1-58A0A0C4DH39 117 aa7.89□□□□□ -1.15
SMARCD3-213ENST00000489503 COX7A2LO14548 114 aa7.89□□□□□ -1.15
SMARCD3-213ENST00000489503 Q5VSD8 79 aa7.89□□□□□ -1.15
SMARCD3-213ENST00000489503 CBLN2Q8IUK8 224 aa7.89□□□□□ -1.15
SMARCD3-213ENST00000489503 CHTF8P0CG12 524 aa7.88□□□□□ -1.15
SMARCD3-213ENST00000489503 LINC00173Q6ZV60 143 aa7.88□□□□□ -1.15
SMARCD3-213ENST00000489503 PRSS3P2Q8NHM4 247 aa7.88□□□□□ -1.15
SMARCD3-213ENST00000489503 TMEM141Q96I45 108 aa7.88□□□□□ -1.15
SMARCD3-213ENST00000489503 YPEL4Q96NS1 127 aa7.88□□□□□ -1.15
SMARCD3-213ENST00000489503 PYGO1Q9Y3Y4 419 aa7.88□□□□□ -1.15
SMARCD3-213ENST00000489503 TRAPPC1Q9Y5R8 145 aa7.88□□□□□ -1.15
SMARCD3-213ENST00000489503 EPM2AB3EWF7 344 aa7.87□□□□□ -1.15
SMARCD3-213ENST00000489503 MALP21145 153 aa7.87□□□□□ -1.15
SMARCD3-213ENST00000489503 SDIM1Q6ZPB5 146 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms