RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 CNBPP62633 177 aaKnown RBP7.48□□□□□ -1.21
ACTN4-206ENST00000489451 PPP1R2P9O14990 202 aa7.47□□□□□ -1.21
ACTN4-206ENST00000489451 AMN1Q8IY45 258 aa7.47□□□□□ -1.21
ACTN4-206ENST00000489451 F8W036 122 aa7.46□□□□□ -1.22
ACTN4-206ENST00000489451 CAMPP49913 170 aa7.46□□□□□ -1.22
ACTN4-206ENST00000489451 PNRC1Q12796 327 aaPredicted RBP7.46□□□□□ -1.22
ACTN4-206ENST00000489451 RNASEKQ6P5S7 137 aaKnown RBP7.46□□□□□ -1.22
ACTN4-206ENST00000489451 TMEM101Q96IK0 257 aa7.46□□□□□ -1.22
ACTN4-206ENST00000489451 BTF3L4Q96K17 158 aa7.46□□□□□ -1.22
ACTN4-206ENST00000489451 VCYO14598 125 aa7.45□□□□□ -1.22
ACTN4-206ENST00000489451 ZNF25P17030 456 aaPredicted RBP7.45□□□□□ -1.22
ACTN4-206ENST00000489451 C15orf56Q8N910 161 aa7.45□□□□□ -1.22
ACTN4-206ENST00000489451 CLRN3Q8NCR9 226 aa7.45□□□□□ -1.22
ACTN4-206ENST00000489451 RNF185Q96GF1 192 aa7.45□□□□□ -1.22
ACTN4-206ENST00000489451 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.44□□□□□ -1.22
ACTN4-206ENST00000489451 A0A087WYN8 130 aa7.44□□□□□ -1.22
ACTN4-206ENST00000489451 TRBV27A0A0K0K1C4 114 aa7.44□□□□□ -1.22
ACTN4-206ENST00000489451 hDV102S1A0JD36 115 aa7.44□□□□□ -1.22
ACTN4-206ENST00000489451 IGKV2-29A2NJV5 120 aaPredicted RBP7.44□□□□□ -1.22
ACTN4-206ENST00000489451 LINC00862A6NCI5 91 aa7.44□□□□□ -1.22
ACTN4-206ENST00000489451 MT-ND4LP03901 98 aa7.44□□□□□ -1.22
ACTN4-206ENST00000489451 FGF6P10767 208 aa7.44□□□□□ -1.22
ACTN4-206ENST00000489451 FCER1GP30273 86 aa7.44□□□□□ -1.22
ACTN4-206ENST00000489451 HBBP68871 147 aa7.44□□□□□ -1.22
ACTN4-206ENST00000489451 SMAGPQ0VAQ4 97 aa7.44□□□□□ -1.22
ACTN4-206ENST00000489451 CLLU1Q5K131 121 aa7.44□□□□□ -1.22
ACTN4-206ENST00000489451 FAM104BQ5XKR9 115 aa7.44□□□□□ -1.22
ACTN4-206ENST00000489451 SPACA4Q8TDM5 124 aa7.44□□□□□ -1.22
ACTN4-206ENST00000489451 KIR2DL4Q99706 377 aa7.44□□□□□ -1.22
ACTN4-206ENST00000489451 GAS8-AS1O95177 125 aa7.43□□□□□ -1.22
ACTN4-206ENST00000489451 CKS2P33552 79 aa7.43□□□□□ -1.22
ACTN4-206ENST00000489451 RPS10P46783 165 aaKnown RBP7.43□□□□□ -1.22
ACTN4-206ENST00000489451 POLR2KP53803 58 aaKnown RBP7.43□□□□□ -1.22
ACTN4-206ENST00000489451 SUMO2P61956 95 aaKnown RBP7.43□□□□□ -1.22
ACTN4-206ENST00000489451 TMEM242Q9NWH2 141 aa7.43□□□□□ -1.22
ACTN4-206ENST00000489451 IGKV3OR2-268A0A0C4DH90 116 aa7.42□□□□□ -1.22
ACTN4-206ENST00000489451 SMKR1H3BMG3 65 aa7.42□□□□□ -1.22
ACTN4-206ENST00000489451 TCAPO15273 167 aa7.42□□□□□ -1.22
ACTN4-206ENST00000489451 TSHBP01222 138 aa7.42□□□□□ -1.22
ACTN4-206ENST00000489451 MRPL51Q4U2R6 128 aaKnown RBP7.42□□□□□ -1.22
ACTN4-206ENST00000489451 MRPL54Q6P161 138 aaKnown RBP7.42□□□□□ -1.22
ACTN4-206ENST00000489451 CFAP161Q6P656 301 aa7.42□□□□□ -1.22
ACTN4-206ENST00000489451 Q6ZRU5 148 aa7.42□□□□□ -1.22
ACTN4-206ENST00000489451 ATP5L2Q7Z4Y8 100 aa7.42□□□□□ -1.22
ACTN4-206ENST00000489451 OR5A1Q8NGJ0 315 aa7.42□□□□□ -1.22
ACTN4-206ENST00000489451 ANAPC16Q96DE5 110 aa7.42□□□□□ -1.22
ACTN4-206ENST00000489451 C20orf78Q9BR46 151 aa7.42□□□□□ -1.22
ACTN4-206ENST00000489451 IGHV3-64A0A075B6Q5 118 aa7.41□□□□□ -1.22
ACTN4-206ENST00000489451 C7orf77A4D0Y5 90 aa7.41□□□□□ -1.22
ACTN4-206ENST00000489451 PPBPP02775 128 aa7.41□□□□□ -1.22
ACTN4-206ENST00000489451 ESDP10768 282 aa7.41□□□□□ -1.22
ACTN4-206ENST00000489451 UQCC3Q6UW78 93 aa7.41□□□□□ -1.22
ACTN4-206ENST00000489451 TMEM18Q96B42 140 aa7.41□□□□□ -1.22
ACTN4-206ENST00000489451 AP5S1Q9NUS5 200 aa7.41□□□□□ -1.22
ACTN4-206ENST00000489451 PLAC8Q9NZF1 115 aa7.41□□□□□ -1.22
ACTN4-206ENST00000489451 PHOX2AO14813 284 aa7.4□□□□□ -1.22
ACTN4-206ENST00000489451 ODF1Q14990 250 aa7.4□□□□□ -1.22
ACTN4-206ENST00000489451 NRACQ8N912 160 aa7.4□□□□□ -1.22
ACTN4-206ENST00000489451 TRBV24-1A0A075B6N3 115 aa7.39□□□□□ -1.23
ACTN4-206ENST00000489451 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.39□□□□□ -1.23
ACTN4-206ENST00000489451 A0A1B0GXF2 115 aa7.39□□□□□ -1.23
ACTN4-206ENST00000489451 GAGE12HA6NDE8 117 aa7.39□□□□□ -1.23
ACTN4-206ENST00000489451 HIGD2BQ4VC39 106 aa7.39□□□□□ -1.23
ACTN4-206ENST00000489451 MRPL52Q86TS9 123 aaKnown RBP7.39□□□□□ -1.23
ACTN4-206ENST00000489451 PRSS3P2Q8NHM4 247 aa7.39□□□□□ -1.23
ACTN4-206ENST00000489451 CHCHD10Q8WYQ3 142 aaPredicted RBP7.39□□□□□ -1.23
ACTN4-206ENST00000489451 D6R8Y8 96 aa7.38□□□□□ -1.23
ACTN4-206ENST00000489451 TNFRSF6BO95407 300 aa7.38□□□□□ -1.23
ACTN4-206ENST00000489451 RPL32P62910 135 aaKnown RBP7.38□□□□□ -1.23
ACTN4-206ENST00000489451 COX6A2Q02221 97 aa7.38□□□□□ -1.23
ACTN4-206ENST00000489451 SS18Q15532 418 aa7.38□□□□□ -1.23
ACTN4-206ENST00000489451 ORMDL3Q8N138 153 aa7.38□□□□□ -1.23
ACTN4-206ENST00000489451 ZNF664Q8N3J9 261 aa7.38□□□□□ -1.23
ACTN4-206ENST00000489451 RAB5AP20339 215 aa7.37□□□□□ -1.23
ACTN4-206ENST00000489451 TMEM136Q6ZRR5 245 aa7.37□□□□□ -1.23
ACTN4-206ENST00000489451 CDC42SE2Q9NRR3 84 aa7.37□□□□□ -1.23
ACTN4-206ENST00000489451 CSDC2Q9Y534 153 aaKnown RBP7.37□□□□□ -1.23
ACTN4-206ENST00000489451 GVQW2A0A096LPI5 108 aaPredicted RBP7.36□□□□□ -1.23
ACTN4-206ENST00000489451 LINC00959A0A1B0GUT2 108 aa7.36□□□□□ -1.23
ACTN4-206ENST00000489451 TMEM218A2RU14 115 aa7.36□□□□□ -1.23
ACTN4-206ENST00000489451 CCL25O15444 150 aa7.36□□□□□ -1.23
ACTN4-206ENST00000489451 XCL1P47992 114 aa7.36□□□□□ -1.23
ACTN4-206ENST00000489451 IFITM2Q01629 132 aa7.36□□□□□ -1.23
ACTN4-206ENST00000489451 FOXI1Q12951 378 aa7.36□□□□□ -1.23
ACTN4-206ENST00000489451 SMIM2Q9BVW6 85 aa7.36□□□□□ -1.23
ACTN4-206ENST00000489451 A0A096LNI7 61 aa7.35□□□□□ -1.23
ACTN4-206ENST00000489451 C1orf196B1AJZ1 125 aa7.35□□□□□ -1.23
ACTN4-206ENST00000489451 PRR3P79522 188 aaKnown RBP7.35□□□□□ -1.23
ACTN4-206ENST00000489451 PRELID3AQ96N28 172 aa7.35□□□□□ -1.23
ACTN4-206ENST00000489451 IMMP2LQ96T52 175 aa7.35□□□□□ -1.23
ACTN4-206ENST00000489451 LAMTOR2Q9Y2Q5 125 aa7.35□□□□□ -1.23
ACTN4-206ENST00000489451 IGKV2-24A0A0C4DH68 120 aa7.34□□□□□ -1.23
ACTN4-206ENST00000489451 NPYP01303 97 aa7.34□□□□□ -1.23
ACTN4-206ENST00000489451 MAJINQ3KP22 176 aa7.34□□□□□ -1.23
ACTN4-206ENST00000489451 CD164L2Q6UWJ8 174 aa7.34□□□□□ -1.23
ACTN4-206ENST00000489451 DPH3Q96FX2 82 aa7.34□□□□□ -1.23
ACTN4-206ENST00000489451 TIMM21Q9BVV7 248 aa7.34□□□□□ -1.23
ACTN4-206ENST00000489451 CTDSP1Q9GZU7 261 aa7.34□□□□□ -1.23
ACTN4-206ENST00000489451 UBE2D4Q9Y2X8 147 aa7.34□□□□□ -1.23
ACTN4-206ENST00000489451 COMMD7Q86VX2 200 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms