RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 TMEM97Q5BJF2 176 aa5.47□□□□□ -1.53
SSBP1-212ENST00000489378 C5orf17Q8NAS9 161 aa5.47□□□□□ -1.53
SSBP1-212ENST00000489378 IGHV1-24A0A0C4DH33 117 aa5.46□□□□□ -1.54
SSBP1-212ENST00000489378 C17orf112F2Z3M2 114 aa5.46□□□□□ -1.54
SSBP1-212ENST00000489378 HMGB3O15347 200 aaKnown RBP5.46□□□□□ -1.54
SSBP1-212ENST00000489378 SSNA1O43805 119 aa5.46□□□□□ -1.54
SSBP1-212ENST00000489378 IGLV7-43P04211 117 aa5.46□□□□□ -1.54
SSBP1-212ENST00000489378 TPT1P13693 172 aaKnown RBP5.46□□□□□ -1.54
SSBP1-212ENST00000489378 SULT1A2P50226 295 aa5.46□□□□□ -1.54
SSBP1-212ENST00000489378 LINC00526Q96FQ7 95 aa5.46□□□□□ -1.54
SSBP1-212ENST00000489378 MED28Q9H204 178 aa5.46□□□□□ -1.54
SSBP1-212ENST00000489378 A0A1B0GUV1 79 aa5.45□□□□□ -1.54
SSBP1-212ENST00000489378 AMTP48728 403 aa5.45□□□□□ -1.54
SSBP1-212ENST00000489378 CRIP1P50238 77 aa5.45□□□□□ -1.54
SSBP1-212ENST00000489378 UBE2D1P51668 147 aa5.45□□□□□ -1.54
SSBP1-212ENST00000489378 LINC01547P58512 204 aaPredicted RBP5.45□□□□□ -1.54
SSBP1-212ENST00000489378 PDZD11Q5EBL8 140 aa5.45□□□□□ -1.54
SSBP1-212ENST00000489378 AQP10Q96PS8 301 aa5.45□□□□□ -1.54
SSBP1-212ENST00000489378 TMSB15BA0A087X1C1 80 aa5.44□□□□□ -1.54
SSBP1-212ENST00000489378 TRAV1-1A0A0B4J248 108 aa5.44□□□□□ -1.54
SSBP1-212ENST00000489378 IGKV3OR2-268A0A0C4DH90 116 aa5.44□□□□□ -1.54
SSBP1-212ENST00000489378 PPP1R2P9O14990 202 aa5.44□□□□□ -1.54
SSBP1-212ENST00000489378 GIPP09681 153 aaPredicted RBP5.44□□□□□ -1.54
SSBP1-212ENST00000489378 CYCSP99999 105 aaKnown RBP5.44□□□□□ -1.54
SSBP1-212ENST00000489378 PHF5AQ7RTV0 110 aaKnown RBP5.44□□□□□ -1.54
SSBP1-212ENST00000489378 PPP1R1CQ8WVI7 109 aa5.44□□□□□ -1.54
SSBP1-212ENST00000489378 CARD19Q96LW7 228 aa5.44□□□□□ -1.54
SSBP1-212ENST00000489378 EPDR1Q9UM22 224 aa5.44□□□□□ -1.54
SSBP1-212ENST00000489378 ARL2-SNX15V9GYD0 113 aa5.44□□□□□ -1.54
SSBP1-212ENST00000489378 A0A1B0GV72 72 aa5.43□□□□□ -1.54
SSBP1-212ENST00000489378 FAM74A7A6NL05 159 aa5.43□□□□□ -1.54
SSBP1-212ENST00000489378 SH2D1AO60880 128 aa5.43□□□□□ -1.54
SSBP1-212ENST00000489378 MPC2O95563 127 aa5.43□□□□□ -1.54
SSBP1-212ENST00000489378 ARL14EPLP0DKL9 152 aa5.43□□□□□ -1.54
SSBP1-212ENST00000489378 LRRC37A5PQ49AS3 106 aa5.43□□□□□ -1.54
SSBP1-212ENST00000489378 FAM74A3Q4VXF1 159 aa5.43□□□□□ -1.54
SSBP1-212ENST00000489378 TCTE3Q8IZS6 198 aa5.43□□□□□ -1.54
SSBP1-212ENST00000489378 ACTR3CQ9C0K3 210 aaPredicted RBP5.43□□□□□ -1.54
SSBP1-212ENST00000489378 PKIGQ9Y2B9 76 aa5.43□□□□□ -1.54
SSBP1-212ENST00000489378 C9orf116Q5BN46 136 aaPredicted RBP5.42□□□□□ -1.54
SSBP1-212ENST00000489378 KRTAP11-1Q8IUC1 163 aa5.42□□□□□ -1.54
SSBP1-212ENST00000489378 CHCHD10Q8WYQ3 142 aaPredicted RBP5.42□□□□□ -1.54
SSBP1-212ENST00000489378 TMEM243Q9BU79 118 aa5.42□□□□□ -1.54
SSBP1-212ENST00000489378 ATP5LO75964 103 aa5.41□□□□□ -1.54
SSBP1-212ENST00000489378 OR10AG1Q8NH19 301 aa5.41□□□□□ -1.54
SSBP1-212ENST00000489378 WFDC1Q9HC57 220 aa5.41□□□□□ -1.54
SSBP1-212ENST00000489378 FOXI1Q12951 378 aa5.4□□□□□ -1.54
SSBP1-212ENST00000489378 COX8CQ7Z4L0 72 aa5.4□□□□□ -1.54
SSBP1-212ENST00000489378 Q86TA4 180 aa5.4□□□□□ -1.54
SSBP1-212ENST00000489378 C9orf62Q8N4C0 152 aa5.4□□□□□ -1.54
SSBP1-212ENST00000489378 TNFSF18Q9UNG2 199 aa5.4□□□□□ -1.54
SSBP1-212ENST00000489378 MUC21A0A140T8X8 626 aa5.4□□□□□ -1.55
SSBP1-212ENST00000489378 LINC00614P0C842 121 aa5.4□□□□□ -1.55
SSBP1-212ENST00000489378 BCL2P10415 239 aa5.4□□□□□ -1.55
SSBP1-212ENST00000489378 RPL12P30050 165 aaKnown RBP5.4□□□□□ -1.55
SSBP1-212ENST00000489378 EIF5AP63241 154 aaKnown RBP5.4□□□□□ -1.55
SSBP1-212ENST00000489378 SYCNQ0VAF6 134 aa5.4□□□□□ -1.55
SSBP1-212ENST00000489378 MTURNQ8N3F0 131 aa5.4□□□□□ -1.55
SSBP1-212ENST00000489378 RETNLBQ9BQ08 111 aa5.4□□□□□ -1.55
SSBP1-212ENST00000489378 A0A087WZ39 114 aa5.39□□□□□ -1.55
SSBP1-212ENST00000489378 LOC107984640A0A0U1RRK4 108 aa5.39□□□□□ -1.55
SSBP1-212ENST00000489378 K7EN84 100 aa5.39□□□□□ -1.55
SSBP1-212ENST00000489378 GCHFRP30047 84 aa5.39□□□□□ -1.55
SSBP1-212ENST00000489378 FAM162BQ5T6X4 162 aa5.39□□□□□ -1.55
SSBP1-212ENST00000489378 ZNF471Q9BX82 626 aaPredicted RBP5.39□□□□□ -1.55
SSBP1-212ENST00000489378 CYTL1Q9NRR1 136 aa5.39□□□□□ -1.55
SSBP1-212ENST00000489378 FXYD6-FXYD2A0A087WZ82 144 aa5.38□□□□□ -1.55
SSBP1-212ENST00000489378 UBE2L6O14933 153 aa5.38□□□□□ -1.55
SSBP1-212ENST00000489378 ARPC5O15511 151 aa5.38□□□□□ -1.55
SSBP1-212ENST00000489378 SCGB1C1Q8TD33 95 aa5.38□□□□□ -1.55
SSBP1-212ENST00000489378 MLST8Q9BVC4 326 aa5.38□□□□□ -1.55
SSBP1-212ENST00000489378 SMIM3Q9BZL3 60 aa5.38□□□□□ -1.55
SSBP1-212ENST00000489378 CARHSP1Q9Y2V2 147 aaKnown RBP5.38□□□□□ -1.55
SSBP1-212ENST00000489378 IGHV1-58A0A0C4DH39 117 aa5.37□□□□□ -1.55
SSBP1-212ENST00000489378 HMSDA8MTL9 139 aa5.37□□□□□ -1.55
SSBP1-212ENST00000489378 M0QY20 66 aa5.37□□□□□ -1.55
SSBP1-212ENST00000489378 NPSP0C0P6 89 aa5.37□□□□□ -1.55
SSBP1-212ENST00000489378 XCL1P47992 114 aa5.37□□□□□ -1.55
SSBP1-212ENST00000489378 TPRXLQ17RH7 258 aa5.37□□□□□ -1.55
SSBP1-212ENST00000489378 TMEM18Q96B42 140 aa5.37□□□□□ -1.55
SSBP1-212ENST00000489378 KRTAP4-1Q9BYQ7 146 aa5.37□□□□□ -1.55
SSBP1-212ENST00000489378 SPANXB1Q9NS25 103 aaPredicted RBP5.37□□□□□ -1.55
SSBP1-212ENST00000489378 HSPB11Q9Y547 144 aa5.37□□□□□ -1.55
SSBP1-212ENST00000489378 PFDN1O60925 122 aa5.36□□□□□ -1.55
SSBP1-212ENST00000489378 TAL2Q16559 108 aa5.36□□□□□ -1.55
SSBP1-212ENST00000489378 KCNRGQ8N5I3 272 aa5.36□□□□□ -1.55
SSBP1-212ENST00000489378 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.35□□□□□ -1.55
SSBP1-212ENST00000489378 PEX7O00628 323 aa5.35□□□□□ -1.55
SSBP1-212ENST00000489378 FGF6P10767 208 aa5.35□□□□□ -1.55
SSBP1-212ENST00000489378 CRYGAP11844 174 aa5.35□□□□□ -1.55
SSBP1-212ENST00000489378 IFITM2Q01629 132 aa5.35□□□□□ -1.55
SSBP1-212ENST00000489378 MEF2BQ02080 365 aaPredicted RBP5.35□□□□□ -1.55
SSBP1-212ENST00000489378 TMUB2Q71RG4 321 aa5.35□□□□□ -1.55
SSBP1-212ENST00000489378 RPP21Q9H633 154 aaKnown RBP5.35□□□□□ -1.55
SSBP1-212ENST00000489378 FAM168BA1KXE4 195 aa5.34□□□□□ -1.55
SSBP1-212ENST00000489378 TCAPO15273 167 aa5.34□□□□□ -1.55
SSBP1-212ENST00000489378 APOMO95445 188 aa5.34□□□□□ -1.55
SSBP1-212ENST00000489378 MGPP08493 103 aa5.34□□□□□ -1.55
SSBP1-212ENST00000489378 SMIM17P0DL12 118 aa5.34□□□□□ -1.55
SSBP1-212ENST00000489378 RPL18AQ02543 176 aaKnown RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms