RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 FABP9Q0Z7S8 132 aa9.27□□□□□ -0.93
COL9A2-208ENST00000488463 TRBV27A0A0K0K1C4 114 aa9.26□□□□□ -0.93
COL9A2-208ENST00000488463 RAB5AP20339 215 aa9.26□□□□□ -0.93
COL9A2-208ENST00000488463 LINC01620Q4KN68 170 aa9.26□□□□□ -0.93
COL9A2-208ENST00000488463 MRPL51Q4U2R6 128 aaKnown RBP9.26□□□□□ -0.93
COL9A2-208ENST00000488463 TMEM136Q6ZRR5 245 aa9.26□□□□□ -0.93
COL9A2-208ENST00000488463 MRPL18Q9H0U6 180 aaKnown RBP9.26□□□□□ -0.93
COL9A2-208ENST00000488463 ST20Q9HBF5 79 aa9.26□□□□□ -0.93
COL9A2-208ENST00000488463 IGLV10-54A0A075B6I4 117 aa9.25□□□□□ -0.93
COL9A2-208ENST00000488463 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.25□□□□□ -0.93
COL9A2-208ENST00000488463 IGKV2-29A2NJV5 120 aaPredicted RBP9.25□□□□□ -0.93
COL9A2-208ENST00000488463 COLCA2A8K830 154 aa9.25□□□□□ -0.93
COL9A2-208ENST00000488463 USP17L23D6RBM5 183 aa9.25□□□□□ -0.93
COL9A2-208ENST00000488463 H7C423 109 aa9.25□□□□□ -0.93
COL9A2-208ENST00000488463 HAMPP81172 84 aa9.25□□□□□ -0.93
COL9A2-208ENST00000488463 ORMDL3Q8N138 153 aa9.25□□□□□ -0.93
COL9A2-208ENST00000488463 YPEL4Q96NS1 127 aa9.25□□□□□ -0.93
COL9A2-208ENST00000488463 TRAV8-4A0A0B4J246 113 aa9.24□□□□□ -0.93
COL9A2-208ENST00000488463 UBE2L6O14933 153 aa9.24□□□□□ -0.93
COL9A2-208ENST00000488463 PRSS1P07477 247 aa9.24□□□□□ -0.93
COL9A2-208ENST00000488463 PMCHP20382 165 aa9.24□□□□□ -0.93
COL9A2-208ENST00000488463 LAMTOR2Q9Y2Q5 125 aa9.24□□□□□ -0.93
COL9A2-208ENST00000488463 FGF6P10767 208 aa9.23□□□□□ -0.93
COL9A2-208ENST00000488463 PHOX2AO14813 284 aa9.22□□□□□ -0.93
COL9A2-208ENST00000488463 C14orf177Q52M58 125 aa9.22□□□□□ -0.93
COL9A2-208ENST00000488463 PRELID3AQ96N28 172 aa9.22□□□□□ -0.93
COL9A2-208ENST00000488463 FLG2Q5D862 2391 aaPredicted RBP9.21□□□□□ -0.93
COL9A2-208ENST00000488463 SUMO2P61956 95 aaKnown RBP9.21□□□□□ -0.94
COL9A2-208ENST00000488463 MRPL52Q86TS9 123 aaKnown RBP9.21□□□□□ -0.94
COL9A2-208ENST00000488463 D6R8Y8 96 aa9.2□□□□□ -0.94
COL9A2-208ENST00000488463 VCYO14598 125 aa9.2□□□□□ -0.94
COL9A2-208ENST00000488463 SMR3BP02814 79 aaPredicted RBP9.2□□□□□ -0.94
COL9A2-208ENST00000488463 ZNF25P17030 456 aaPredicted RBP9.2□□□□□ -0.94
COL9A2-208ENST00000488463 RPL32P62910 135 aaKnown RBP9.2□□□□□ -0.94
COL9A2-208ENST00000488463 C20orf78Q9BR46 151 aa9.2□□□□□ -0.94
COL9A2-208ENST00000488463 MAP1LC3AQ9H492 121 aa9.2□□□□□ -0.94
COL9A2-208ENST00000488463 C1orf196B1AJZ1 125 aa9.19□□□□□ -0.94
COL9A2-208ENST00000488463 TCAPO15273 167 aa9.19□□□□□ -0.94
COL9A2-208ENST00000488463 TNFRSF6BO95407 300 aa9.19□□□□□ -0.94
COL9A2-208ENST00000488463 SLPIP03973 132 aa9.19□□□□□ -0.94
COL9A2-208ENST00000488463 KIAA1644Q3SXP7 199 aa9.19□□□□□ -0.94
COL9A2-208ENST00000488463 AMMECR1LQ6DCA0 310 aa9.19□□□□□ -0.94
COL9A2-208ENST00000488463 RNASEKQ6P5S7 137 aaKnown RBP9.19□□□□□ -0.94
COL9A2-208ENST00000488463 EPM2AB3EWF7 344 aa9.18□□□□□ -0.94
COL9A2-208ENST00000488463 TRGC2P03986 189 aa9.18□□□□□ -0.94
COL9A2-208ENST00000488463 Q5VSD8 79 aa9.18□□□□□ -0.94
COL9A2-208ENST00000488463 DGAT2L7PQ6IED9 249 aa9.18□□□□□ -0.94
COL9A2-208ENST00000488463 C15orf56Q8N910 161 aa9.18□□□□□ -0.94
COL9A2-208ENST00000488463 CDC42SE2Q9NRR3 84 aa9.18□□□□□ -0.94
COL9A2-208ENST00000488463 DMBT1Q9UGM3 2413 aaPredicted RBP9.18□□□□□ -0.94
COL9A2-208ENST00000488463 GAGE12HA6NDE8 117 aa9.17□□□□□ -0.94
COL9A2-208ENST00000488463 NPYP01303 97 aa9.17□□□□□ -0.94
COL9A2-208ENST00000488463 RAB5BP61020 215 aa9.17□□□□□ -0.94
COL9A2-208ENST00000488463 C9orf163Q8N9P6 203 aa9.17□□□□□ -0.94
COL9A2-208ENST00000488463 OR5A1Q8NGJ0 315 aa9.17□□□□□ -0.94
COL9A2-208ENST00000488463 PRSS3P2Q8NHM4 247 aa9.17□□□□□ -0.94
COL9A2-208ENST00000488463 CHCHD10Q8WYQ3 142 aaPredicted RBP9.17□□□□□ -0.94
COL9A2-208ENST00000488463 KIR2DL4Q99706 377 aa9.17□□□□□ -0.94
COL9A2-208ENST00000488463 ALKBH7Q9BT30 221 aaPredicted RBP9.17□□□□□ -0.94
COL9A2-208ENST00000488463 IGKV3OR2-268A0A0C4DH90 116 aa9.16□□□□□ -0.94
COL9A2-208ENST00000488463 G0S2P27469 103 aa9.16□□□□□ -0.94
COL9A2-208ENST00000488463 CNBPP62633 177 aaKnown RBP9.16□□□□□ -0.94
COL9A2-208ENST00000488463 FOXI1Q12951 378 aa9.16□□□□□ -0.94
COL9A2-208ENST00000488463 SCXQ7RTU7 201 aa9.16□□□□□ -0.94
COL9A2-208ENST00000488463 FAM104AQ969W3 186 aa9.16□□□□□ -0.94
COL9A2-208ENST00000488463 NXT2Q9NPJ8 142 aaKnown RBP9.16□□□□□ -0.94
COL9A2-208ENST00000488463 LINC00959A0A1B0GUT2 108 aa9.15□□□□□ -0.94
COL9A2-208ENST00000488463 FCER1GP30273 86 aa9.15□□□□□ -0.94
COL9A2-208ENST00000488463 CHAC1Q9BUX1 264 aa9.15□□□□□ -0.94
COL9A2-208ENST00000488463 SMIM2Q9BVW6 85 aa9.15□□□□□ -0.94
COL9A2-208ENST00000488463 UBE2D4Q9Y2X8 147 aa9.15□□□□□ -0.94
COL9A2-208ENST00000488463 CSDC2Q9Y534 153 aaKnown RBP9.15□□□□□ -0.94
COL9A2-208ENST00000488463 PKHD1L1Q86WI1 4243 aa9.15□□□□□ -0.94
COL9A2-208ENST00000488463 LOC389332A0A1B0GUA5 103 aa9.14□□□□□ -0.95
COL9A2-208ENST00000488463 K7EMI3 77 aa9.14□□□□□ -0.95
COL9A2-208ENST00000488463 SDIM1Q6ZPB5 146 aa9.14□□□□□ -0.95
COL9A2-208ENST00000488463 FA2HQ7L5A8 372 aa9.14□□□□□ -0.95
COL9A2-208ENST00000488463 BAGE3Q86Y29 109 aa9.14□□□□□ -0.95
COL9A2-208ENST00000488463 ZNF664Q8N3J9 261 aa9.14□□□□□ -0.95
COL9A2-208ENST00000488463 CIRBP-AS1Q8TBR5 109 aa9.14□□□□□ -0.95
COL9A2-208ENST00000488463 TMEM101Q96IK0 257 aa9.14□□□□□ -0.95
COL9A2-208ENST00000488463 hDV102S1A0JD36 115 aa9.13□□□□□ -0.95
COL9A2-208ENST00000488463 PRSS47A8MTI9 375 aa9.13□□□□□ -0.95
COL9A2-208ENST00000488463 PANO1I0J062 215 aa9.13□□□□□ -0.95
COL9A2-208ENST00000488463 SMAGPQ0VAQ4 97 aa9.13□□□□□ -0.95
COL9A2-208ENST00000488463 Q8N8P6 123 aa9.13□□□□□ -0.95
COL9A2-208ENST00000488463 TIMM21Q9BVV7 248 aa9.13□□□□□ -0.95
COL9A2-208ENST00000488463 LRP1Q07954 4544 aaKnown RBP9.12□□□□□ -0.95
COL9A2-208ENST00000488463 RPL39P62891 51 aaKnown RBP9.12□□□□□ -0.95
COL9A2-208ENST00000488463 TMEM18Q96B42 140 aa9.12□□□□□ -0.95
COL9A2-208ENST00000488463 GVQW2A0A096LPI5 108 aaPredicted RBP9.11□□□□□ -0.95
COL9A2-208ENST00000488463 CCL25O15444 150 aa9.11□□□□□ -0.95
COL9A2-208ENST00000488463 XCL1P47992 114 aa9.11□□□□□ -0.95
COL9A2-208ENST00000488463 KRTAP10-4P60372 401 aaPredicted RBP9.11□□□□□ -0.95
COL9A2-208ENST00000488463 Q6ZUT4 128 aa9.11□□□□□ -0.95
COL9A2-208ENST00000488463 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.11□□□□□ -0.95
COL9A2-208ENST00000488463 LINC01549A6NIU2 74 aa9.1□□□□□ -0.95
COL9A2-208ENST00000488463 FAM229AH3BQW9 127 aa9.1□□□□□ -0.95
COL9A2-208ENST00000488463 S100A6P06703 90 aa9.1□□□□□ -0.95
COL9A2-208ENST00000488463 LINC00614P0C842 121 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms